Os01g0136200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 16.9 kDa class I heat shock protein.
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Os01g0136200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 16.9 kDa class I heat shock protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.66 | 0.607 | 7.75 | 3.07 | 0.697 | -0.776 | -1.08 | 1.2 | 0.00293 | 2.1 | 87 | 27 | -- | -- |
| 168.24 | 0.609 | 7.76 | 3.15 | 0.779 | -0.779 | -0.399 | -- | 0.00877 | 2.13 | 85.13 | 16 | -- | -- |
| 168.8 | 0.61 | 7.76 | 3.16 | 0.767 | -0.834 | -- | 0.394 | 0.00298 | 2.22 | 86.87 | 24 | -- | -- |
| 168.81 | 0.609 | 7.76 | 3.17 | 0.797 | -0.806 | -- | -- | 0.00525 | 2.18 | 85 | 16 | -- | -- |
| 190.46 | 0.643 | 7.73 | 3.08 | -- | -0.345 | -- | 0.709 | 0.113 | -- | 88.26 | 43 | -- | -- |
| 186.06 | 0.639 | 7.73 | 3.03 | 0.333 | -- | -0.795 | -- | 0.168 | 0.855 | -- | -- | -- | -- |
| 188.73 | 0.643 | 7.73 | 3.06 | 0.335 | -- | -- | -- | 0.172 | 0.882 | -- | -- | -- | -- |
| 191.55 | 0.645 | 7.73 | 3.12 | -- | -0.292 | -- | -- | 0.125 | -- | 86.93 | 24 | -- | -- |
| 425.8 | 0.961 | 7.82 | -- | 0.889 | -0.64 | -- | -- | -0.257 | 1.99 | 74 | 13 | -- | -- |
| 195.72 | 0.654 | 7.72 | 3.08 | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
| 436.12 | 0.977 | 7.8 | -- | 0.386 | -- | -- | -- | -0.169 | 1.23 | -- | -- | -- | -- |
| 444.57 | 0.985 | 7.8 | -- | -- | 0.141 | -- | -- | -0.161 | -- | 51 | 5 | -- | -- |
| 445.33 | 0.985 | 7.8 | -- | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.66 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 6 |
| 2 | 151.94 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 9 |
| 12 | 153.91 | humidity | 90.0 | 30 | < th | dose independent | rect. | 17 | 18 |
| 16 | 155.49 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 21 | 156.25 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 46 | 157.45 | humidity | 90.0 | 30 | < th | dose independent | rect. | 15 | 20 |
| 47 | 157.49 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 50 | 157.74 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 61 | 158.25 | humidity | 90.0 | 270 | < th | dose independent | rect. | 5 | 3 |
| 63 | 158.47 | humidity | 70.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 64 | 158.59 | humidity | 50.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 87 | 159.31 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 18 | 17 |
| 88 | 159.35 | radiation | 1.0 | 270 | > th | dose independent | sin | 11 | NA |
| 100 | 159.97 | radiation | 1.0 | 270 | < th | dose independent | sin | 11 | NA |
| 102 | 160.04 | radiation | 1.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 108 | 160.15 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 114 | 160.40 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 117 | 160.45 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 21 | 14 |
| 119 | 160.47 | humidity | 90.0 | 30 | < th | dose independent | sin | 7 | NA |
| 122 | 160.54 | humidity | 90.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 129 | 160.68 | humidity | 90.0 | 30 | > th | dose independent | sin | 7 | NA |
| 136 | 160.83 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 151 | 161.04 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 172 | 161.31 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 24 | 11 |
| 187 | 161.67 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 9 |
| 189 | 161.68 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 5 |
| 195 | 161.77 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 10 |
| 230 | 162.24 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 236 | 162.30 | wind | 3.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 247 | 162.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 248 | 162.52 | humidity | 90.0 | 30 | > th | dose independent | rect. | 22 | 12 |
| 254 | 162.55 | radiation | 1.0 | 90 | > th | dose independent | sin | 9 | NA |
| 255 | 162.55 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 5 | 3 |
| 305 | 163.09 | radiation | 1.0 | 90 | < th | dose independent | sin | 9 | NA |
| 338 | 163.44 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 356 | 163.65 | humidity | 90.0 | 30 | > th | dose independent | rect. | 20 | 14 |
| 361 | 163.66 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 366 | 163.70 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 18 | 17 |
| 389 | 163.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 405 | 164.10 | wind | 7.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 407 | 164.12 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 415 | 164.17 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 423 | 164.21 | temperature | 25.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 436 | 164.32 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 5 | 5 |
| 453 | 164.39 | wind | 5.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 477 | 164.54 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 17 | 18 |
| 535 | 164.87 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 24 | 11 |
| 536 | 164.88 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 547 | 164.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 6 |
| 549 | 164.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 551 | 164.96 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 577 | 165.07 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 578 | 165.07 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 579 | 165.07 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 580 | 165.07 | temperature | 10.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 613 | 165.24 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 20 |
| 625 | 165.33 | wind | 5.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 628 | 165.35 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 19 |
| 629 | 165.36 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 11 | 19 |
| 647 | 165.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 5 |
| 650 | 165.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 653 | 165.51 | humidity | 90.0 | 30 | > th | dose independent | rect. | 15 | 19 |
| 659 | 165.52 | humidity | 90.0 | 30 | > th | dose independent | rect. | 17 | 17 |
| 676 | 165.58 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 678 | 165.58 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 679 | 165.58 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 680 | 165.58 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 681 | 165.58 | temperature | 10.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 686 | 165.59 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 13 |
| 690 | 165.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 704 | 165.68 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 706 | 165.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 709 | 165.68 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 710 | 165.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 760 | 165.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 771 | 165.96 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 22 |
| 775 | 165.98 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 786 | 166.02 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 795 | 166.04 | radiation | 1.0 | 30 | > th | dose dependent | sin | 10 | NA |
| 805 | 166.06 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 818 | 166.11 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 18 |
| 827 | 166.14 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 839 | 166.21 | humidity | 90.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 844 | 166.24 | humidity | 90.0 | 30 | > th | dose independent | rect. | 22 | 20 |
| 907 | 166.46 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 929 | 166.57 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 18 |
| 932 | 166.57 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 979 | 166.72 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 990 | 166.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 6 |