Os01g0136000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytosolic class I small heat-shock protein HSP17.5.
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Os01g0136000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytosolic class I small heat-shock protein HSP17.5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 303.52 | 0.819 | 4.03 | -0.914 | 1.54 | 2.51 | -0.349 | -3.48 | 0.091 | 10.8 | 24.2 | 11 | -- | -- |
| 308.87 | 0.825 | 3.98 | -0.428 | 1.56 | 2.18 | -0.756 | -- | 0.24 | 11 | 24.2 | 11 | -- | -- |
| 303.95 | 0.812 | 4.04 | -0.978 | 1.54 | 2.53 | -- | -3.83 | 0.074 | 10.8 | 24.18 | 12 | -- | -- |
| 311.27 | 0.827 | 3.98 | -0.459 | 1.57 | 2.18 | -- | -- | 0.237 | 10.9 | 24.2 | 11 | -- | -- |
| 428.66 | 0.97 | 4.12 | -1.29 | -- | 3.45 | -- | -5.25 | -0.0654 | -- | 24.18 | 12 | -- | -- |
| 384.53 | 0.919 | 3.92 | -0.0922 | 2.16 | -- | -0.486 | -- | 0.491 | 12.3 | -- | -- | -- | -- |
| 385.55 | 0.92 | 3.92 | -0.111 | 2.16 | -- | -- | -- | 0.489 | 12.3 | -- | -- | -- | -- |
| 443.84 | 0.981 | 4.05 | -0.639 | -- | 3.05 | -- | -- | 0.108 | -- | 24 | 3 | -- | -- |
| 316.49 | 0.833 | 3.96 | -- | 1.6 | 2.11 | -- | -- | 0.329 | 11.1 | 24.54 | 8 | -- | -- |
| 679.29 | 1.22 | 3.97 | -0.183 | -- | -- | -- | -- | 0.455 | -- | -- | -- | -- | -- |
| 385.88 | 0.919 | 3.92 | -- | 2.16 | -- | -- | -- | 0.501 | 12.3 | -- | -- | -- | -- |
| 454.07 | 0.992 | 4.02 | -- | -- | 2.98 | -- | -- | 0.2 | -- | 24.13 | 2 | -- | -- |
| 680.17 | 1.22 | 3.96 | -- | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 295.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 12 |
| 4 | 299.08 | temperature | 15 | 90 | > th | dose dependent | sin | 1 | NA |
| 5 | 299.09 | temperature | 15 | 270 | > th | dose dependent | sin | 3 | NA |
| 14 | 299.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 20 | 300.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 59 | 302.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 12 |
| 68 | 303.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 69 | 303.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 71 | 303.89 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 73 | 303.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 74 | 303.99 | temperature | 30 | 30 | < th | dose dependent | sin | 0 | NA |
| 91 | 304.47 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 124 | 305.26 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 164 | 306.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 362 | 310.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 424 | 311.54 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 514 | 312.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 528 | 313.26 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 570 | 314.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 649 | 315.21 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 670 | 315.40 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 713 | 315.88 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 721 | 315.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 970 | 318.41 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 11 |