BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0136000 Os01g0136000|013-010-A12
(149 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0136000 Similar to Cytosolic class I small heat-shock ... 205 8e-54
Os01g0136200 16.9 kDa class I heat shock protein 193 3e-50
Os01g0136100 16.9 kDa class I heat shock protein 192 8e-50
Os03g0267000 Low molecular mass heat shock protein Oshsp18.0 145 1e-35
Os03g0266900 Low molecular mass heat shock protein Oshsp17.3 143 4e-35
Os03g0266300 Class I low-molecular-weight heat shock protei... 142 8e-35
Os03g0267200 Low molecular mass heat shock protein Oshsp17.7 141 2e-34
Os01g0135800 Similar to Cytosolic class I small heat shock ... 115 1e-26
Os02g0128000 Similar to Cytosolic class I small heat shock ... 93 8e-20
Os04g0445100 Similar to 22.7 kDa class IV heat shock protei... 85 2e-17
Os06g0253100 HSP20-like chaperone domain containing protein 70 6e-13
Os02g0217900 Similar to Cytosolic class II small heat shock... 67 6e-12
Os11g0244200 Similar to Pisum sativum 17.9 kDa heat shock p... 65 1e-11
>Os01g0136000 Similar to Cytosolic class I small heat-shock protein HSP17.5
Length = 149
Score = 205 bits (522), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/149 (73%), Positives = 109/149 (73%)
Query: 1 MSLVRRSNVXXXXXXXXXXXXGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADLP 60
MSLVRRSNV GVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADLP
Sbjct: 1 MSLVRRSNVFDPFADFWDPFDGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADLP 60
Query: 61 GXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVK 120
G GNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVK
Sbjct: 61 GVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVK 120
Query: 121 ASMENGVLXXXXXXXXXXXXXXXXIEISG 149
ASMENGVL IEISG
Sbjct: 121 ASMENGVLTVTVPKAEVKKPEVKAIEISG 149
>Os01g0136200 16.9 kDa class I heat shock protein
Length = 150
Score = 193 bits (491), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 1 MSLVRRSNVXXXXXXXX-XXXXGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADL 59
MSLVRRSNV VFRS+VPATSD DTAAFANAR+DWKETPESHVFKADL
Sbjct: 1 MSLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADL 60
Query: 60 PGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV 119
PG GNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV
Sbjct: 61 PGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV 120
Query: 120 KASMENGVLXXXXXXXXXXXXXXXXIEISG 149
KA MENGVL IEISG
Sbjct: 121 KAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
>Os01g0136100 16.9 kDa class I heat shock protein
Length = 150
Score = 192 bits (488), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 1 MSLVRRSNVXXXXXXXX-XXXXGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADL 59
MSLVRRSNV VFRS+VPATSD DTAAFANAR+DWKETPESHVFKADL
Sbjct: 1 MSLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADL 60
Query: 60 PGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV 119
PG GNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV
Sbjct: 61 PGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV 120
Query: 120 KASMENGVLXXXXXXXXXXXXXXXXIEISG 149
KA +ENGVL IEISG
Sbjct: 121 KAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
>Os03g0267000 Low molecular mass heat shock protein Oshsp18.0
Length = 161
Score = 145 bits (365), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 96/162 (59%), Gaps = 14/162 (8%)
Query: 1 MSLVRRSNVXXXXX-------------XXXXXXXGVFRSLVPATSDRDTAAFANARVDWK 47
MSL+RRSNV +F S P + +TAAFA AR+DWK
Sbjct: 1 MSLIRRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSF-PRGTSSETAAFAGARIDWK 59
Query: 48 ETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRR 107
ETPE+HVFKAD+PG GNVL ISG+RSKE+E+K DKWHRVERSSG+F+RR
Sbjct: 60 ETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRR 119
Query: 108 FRLPENAKVDQVKASMENGVLXXXXXXXXXXXXXXXXIEISG 149
FRLPEN K +Q+KASMENGVL I+++G
Sbjct: 120 FRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG 161
>Os03g0266900 Low molecular mass heat shock protein Oshsp17.3
Length = 154
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 95/155 (61%), Gaps = 7/155 (4%)
Query: 1 MSLVRRSNVXXXXXXXXXXXXGVFR------SLVPATSDRDTAAFANARVDWKETPESHV 54
MS++RRSNV F SL P ++ D AAFA AR+DWKETPE+HV
Sbjct: 1 MSMIRRSNVFDPFSLDLWDPFDGFPFGSGSGSLFP-RANSDAAAFAGARIDWKETPEAHV 59
Query: 55 FKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENA 114
FKAD+PG GNVL ISG+R KE+E+K DKWHRVERSSG+F+RRFRLPEN
Sbjct: 60 FKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENT 119
Query: 115 KVDQVKASMENGVLXXXXXXXXXXXXXXXXIEISG 149
K +Q+KASMENGVL I+I+G
Sbjct: 120 KPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
>Os03g0266300 Class I low-molecular-weight heat shock protein 17.9
Length = 161
Score = 142 bits (358), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 85/121 (70%)
Query: 29 PATSDRDTAAFANARVDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKE 88
P + +TAAFA AR+DWKETPE+HVFKAD+PG GN+L ISG+R+KE+E
Sbjct: 41 PRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQE 100
Query: 89 DKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLXXXXXXXXXXXXXXXXIEIS 148
+K D+WHRVERSSG+F+RRFRLP+NAK +Q+KASMENGVL I+IS
Sbjct: 101 EKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQIS 160
Query: 149 G 149
G
Sbjct: 161 G 161
>Os03g0267200 Low molecular mass heat shock protein Oshsp17.7
Length = 159
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 83/118 (70%)
Query: 32 SDRDTAAFANARVDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKN 91
++ D AAFA AR+DWKETPE HVFKAD+PG GN+L ISG+RS+E+E+K+
Sbjct: 42 ANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKS 101
Query: 92 DKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLXXXXXXXXXXXXXXXXIEISG 149
DKWHRVERSSG+F+RRFRLPEN K +Q+KASMENGVL I+ISG
Sbjct: 102 DKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
>Os01g0135800 Similar to Cytosolic class I small heat shock protein 3B (Fragment)
Length = 150
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 1 MSLVRRSNVXXXXXX---XXXXXXGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKA 57
MSLVR NV G RSL N RVDWKETP +HVF A
Sbjct: 1 MSLVRSGNVLDPMSVDFWADADPFGAVRSLA-----ERCPVLTNVRVDWKETPTAHVFTA 55
Query: 58 DLPGXXXXXXXXXXXXGNVLVISGQRSKEKE--DKND-KWHRVERSSGQFMRRFRLPENA 114
DLPG G VLVISG+R++E++ KND +WH VERSSG+F RRFRLP A
Sbjct: 56 DLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGA 115
Query: 115 KVDQVKASMENGVLXXXXXXXXXXXXXXXXIEISG 149
+VDQV ASM+NGVL I ISG
Sbjct: 116 RVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
>Os02g0128000 Similar to Cytosolic class I small heat shock protein 6 (Fragment)
Length = 177
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 40 ANARVDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVER 99
+ A +DWKET +HVF AD+PG VL ISGQR++ E+K ++WHRVER
Sbjct: 68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVER 127
Query: 100 SSGQFMRRFRLPENAKVDQVKASMENGVL 128
SS +F+R RLP NA D V A+++NGVL
Sbjct: 128 SSERFVRTVRLPPNANTDGVHAALDNGVL 156
>Os04g0445100 Similar to 22.7 kDa class IV heat shock protein precursor
Length = 215
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 24 FRSL--VPATSDRD-TAAFANARVDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVIS 80
FR L VP DRD A + ARVDW+ET ++H D+PG VL IS
Sbjct: 55 FRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRIS 114
Query: 81 GQR----SKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVL 128
G+R + E++ D WHR ERS G+F R+ RLP+NA +D + AS++NGVL
Sbjct: 115 GERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
>Os06g0253100 HSP20-like chaperone domain containing protein
Length = 146
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 22 GVFRSLV---PATSDRDTAAFANARVDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLV 78
G FR ++ P D +A+ A A +DW ETP SHV + ++PG GNVL
Sbjct: 8 GPFRRILYGRPFPPDWASAS-ATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLT 66
Query: 79 ISG---QRSKEKEDKNDK---WHRVERSSGQFMRRFRLPENAKVDQVKASMENGVL 128
+ G + EKE + +K WH ER +F R LP +V+Q++AS++NGVL
Sbjct: 67 VRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVL 122
>Os02g0217900 Similar to Cytosolic class II small heat shock protein 4 (Fragment)
Length = 175
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 25 RSLVPATSD--RDTAAFANARVDWKETPESH--VFKADLPGXXXXXXXXXXXXGNVLVIS 80
R L P T RD A AN +D KE S V D+PG GNVL IS
Sbjct: 30 RQLNPPTRAYVRDRRAMANTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAIS 89
Query: 81 GQRSKEKEDKND-----KWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVL 128
G+R + D +D K+ R+ER G+FMRRF LPE+A +D V+A ++GVL
Sbjct: 90 GERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVL 142
>Os11g0244200 Similar to Pisum sativum 17.9 kDa heat shock protein (hsp17.9)
(Fragment)
Length = 206
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 42 ARVDWKETPESHVFKADLPGXXXXXXXXXXXXGN-VLVISGQRSKEKEDKND-------K 93
AR DWKETPE+HV D+PG + VL +SG+R + + + +
Sbjct: 72 ARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVR 131
Query: 94 WHRVERSSGQFMRRFRLPENAKVDQVKASMENGVL 128
WHR ER++G+F RRFR+P A V +V A +++GVL
Sbjct: 132 WHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,235,449
Number of extensions: 97372
Number of successful extensions: 239
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 233
Number of HSP's successfully gapped: 14
Length of query: 149
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 57
Effective length of database: 12,232,113
Effective search space: 697230441
Effective search space used: 697230441
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 151 (62.8 bits)