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Os03g0266300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Class I low-molecular-weight heat shock protein 17.9.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0337) R2 : 0.778
β1 : 1.33 (0.126) R2dD : 0.0606 R2D : 0.0487
β2 : 2.51 (0.0894) R2dC : 0.416 R2C : 0.215
β3 : 3.14 (0.113) R2dE : 0.421 R2E : 0.269
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 5.24 (0.492) R2dD*E : 0.0636 R2D*E : 0.0602
γ1 : 0.125 (0.072) R2dN8 : 0.00312 R2N8 : -0.00016
σ : 0.622
deviance : 178.56
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C
peak time of C : 18.6
E
wheather : temperature
threshold : 14.87
memory length : 4
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 19.1
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
170.47 0.613 10.6 1.5 3.23 2.95 2.75 5.99 0.135 18.1 15.21 9 20.8 --
187.81 0.643 10.6 1.14 2.78 2.05 3.06 -- -0.00294 16.3 23.98 3 23.4 --
178.56 0.622 10.6 1.33 2.51 3.14 -- 5.24 0.125 18.6 14.87 4 19.1 --
208.99 0.678 10.6 1.16 2.81 2.48 -- -- 0.00484 16.5 24.76 2 0.716 --
213.69 0.681 10.5 1.37 -- 3.47 -- 6.24 0.238 -- 6.87 89 15.6 --
244.15 0.733 10.6 1.32 2.88 -- 3.8 -- 0.26 15.3 -- -- -- --
288.73 0.796 10.5 1.39 2.91 -- -- -- 0.283 15.5 -- -- -- --
247.48 0.733 10.6 1.04 -- 3.74 -- -- 0.111 -- 7.098 75 15.2 --
243.2 0.73 10.7 -- 2.81 2.64 -- -- -0.189 16.7 24.1 2 23.7 --
762.61 1.29 10.5 1.27 -- -- -- -- 0.206 -- -- -- -- --
339.97 0.863 10.6 -- 2.89 -- -- -- 0.128 15.5 -- -- -- --
273.64 0.77 10.6 -- -- 3.92 -- -- -0.0319 -- 11.05 61 15.1 --
805.28 1.32 10.6 -- -- -- -- -- 0.0645 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 164.52 temperature 15 10 > th dose dependent rect. 6 14
2 166.03 temperature 10 720 > th dose dependent rect. 5 5
4 167.01 temperature 15 10 > th dose dependent rect. 6 20
8 168.15 temperature 20 90 > th dose dependent rect. 6 5
17 169.71 temperature 20 270 > th dose dependent rect. 7 1
23 170.56 temperature 15 10 > th dose dependent sin 3 NA
80 174.30 temperature 25 10 > th dose dependent sin 7 NA
160 178.54 temperature 15 90 > th dose dependent rect. 23 12
180 179.48 temperature 25 90 > th dose independent rect. 6 5
239 182.13 temperature 30 10 < th dose dependent rect. 11 19
243 182.15 temperature 30 90 < th dose dependent rect. 3 12
246 182.35 temperature 25 90 > th dose dependent rect. 23 12
261 182.73 temperature 30 30 < th dose dependent sin 3 NA
265 182.79 temperature 10 720 > th dose dependent rect. 22 12
352 185.13 temperature 20 10 > th dose dependent rect. 6 6
380 185.90 temperature 30 10 < th dose dependent rect. 19 23
403 186.49 temperature 25 10 > th dose dependent rect. 23 13
404 186.52 temperature 20 10 > th dose dependent rect. 13 23
426 187.00 temperature 20 10 > th dose dependent rect. 15 23
430 187.07 temperature 30 10 < th dose dependent rect. 1 23
453 187.44 temperature 25 90 > th dose independent rect. 6 13
454 187.44 temperature 25 10 > th dose independent rect. 6 14
467 187.74 temperature 30 10 < th dose dependent rect. 17 23
476 187.92 temperature 20 720 > th dose independent rect. 6 11
480 187.97 temperature 30 10 < th dose dependent no NA NA
510 188.54 temperature 25 10 > th dose independent rect. 6 19
513 188.68 temperature 10 10 > th dose dependent no NA NA
520 188.79 temperature 30 10 < th dose dependent rect. 15 23
524 188.89 temperature 25 10 > th dose independent sin 2 NA
526 188.90 temperature 25 90 > th dose independent sin 3 NA
539 189.00 temperature 20 10 > th dose dependent rect. 21 23
579 189.49 temperature 30 10 < th dose dependent rect. 13 23
587 189.60 temperature 25 90 < th dose independent rect. 2 13
588 189.60 temperature 30 10 < th dose dependent rect. 23 23
591 189.68 temperature 20 10 > th dose dependent rect. 23 23
611 189.85 temperature 30 10 < th dose dependent rect. 21 23
627 189.97 radiation 1 90 > th dose dependent sin 10 NA
645 190.18 temperature 25 90 < th dose independent sin 3 NA
666 190.45 temperature 30 10 < th dose dependent rect. 3 23
684 190.68 temperature 25 90 < th dose independent rect. 9 22
708 190.98 temperature 25 90 < th dose independent rect. 2 15
709 190.99 temperature 25 270 < th dose independent rect. 23 15
713 191.05 temperature 25 90 > th dose independent rect. 6 19
734 191.33 temperature 20 10 > th dose dependent rect. 1 23
802 192.19 temperature 25 10 > th dose independent rect. 6 6
846 192.66 temperature 25 90 < th dose independent rect. 2 17
850 192.66 temperature 20 10 > th dose dependent rect. 9 23
866 192.87 temperature 30 720 < th dose dependent rect. 3 2
872 192.93 radiation 1 90 > th dose dependent rect. 16 19
930 193.45 temperature 20 10 > th dose dependent rect. 17 23
948 193.63 temperature 25 90 < th dose independent rect. 2 21
965 193.82 temperature 30 720 < th dose dependent rect. 2 10
992 194.11 temperature 25 10 < th dose independent rect. 10 21