Os06g0253100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os06g0253100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 549.93 | 1.1 | 6.41 | -1.2 | 4.59 | 7.02 | 3.44 | 3.37 | -0.123 | 8.97 | 15.34 | 10 | 6.02 | 19.9 |
| 564.78 | 1.11 | 6.46 | -1.38 | 4.54 | 7.07 | 3.63 | -- | -0.263 | 9.05 | 15.3 | 7 | 6.03 | 19.9 |
| 589.12 | 1.13 | 6.4 | -1 | 4.55 | 7.04 | -- | 4.26 | -0.092 | 8.92 | 15.47 | 9 | 6 | 19.9 |
| 613.04 | 1.15 | 6.45 | -1.42 | 4.54 | 7.08 | -- | -- | -0.218 | 8.97 | 15.53 | 7 | 6.05 | 19.9 |
| 872.64 | 1.38 | 6.46 | 0.02 | -- | 7.54 | -- | 6.9 | 0.5 | -- | 16.22 | 4 | 5.81 | 12.2 |
| 1255.56 | 1.66 | 6.25 | -0.449 | 5.67 | -- | 4.76 | -- | 0.819 | 12 | -- | -- | -- | -- |
| 1353.71 | 1.72 | 6.24 | -0.262 | 5.65 | -- | -- | -- | 0.839 | 12 | -- | -- | -- | -- |
| 816.39 | 1.33 | 6.47 | -0.802 | -- | 7.88 | -- | -- | 0.246 | -- | 17.15 | 17 | 5.87 | 12 |
| 667.39 | 1.2 | 6.43 | -- | 4.48 | 7 | -- | -- | -0.154 | 8.97 | 15.69 | 7 | 6.05 | 19.9 |
| 3364.44 | 2.71 | 6.36 | -0.437 | -- | -- | -- | -- | 0.761 | -- | -- | -- | -- | -- |
| 1355.52 | 1.72 | 6.23 | -- | 5.65 | -- | -- | -- | 0.868 | 12 | -- | -- | -- | -- |
| 832.34 | 1.34 | 6.51 | -- | -- | 7.73 | -- | -- | 0.263 | -- | 16 | 18 | 5.88 | 11.9 |
| 3369.48 | 2.71 | 6.35 | -- | -- | -- | -- | -- | 0.81 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 563.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 3 | 583.18 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 7 | 598.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 14 | 615.39 | temperature | 15 | 10 | > th | dose dependent | sin | 2 | NA |
| 17 | 616.58 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 22 | 620.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 90 | 670.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 141 | 699.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 163 | 706.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 175 | 712.11 | temperature | 25 | 30 | < th | dose independent | rect. | 2 | 16 |
| 207 | 720.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 217 | 724.51 | temperature | 25 | 30 | > th | dose independent | sin | 3 | NA |
| 245 | 733.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 280 | 745.72 | temperature | 25 | 30 | < th | dose independent | sin | 3 | NA |
| 331 | 758.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 355 | 763.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 457 | 780.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 7 |
| 527 | 794.10 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 542 | 797.19 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 548 | 798.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 580 | 804.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 587 | 805.05 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 599 | 806.59 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 12 |
| 610 | 808.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 618 | 809.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 650 | 813.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 673 | 817.26 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 8 |
| 693 | 819.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 712 | 820.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 748 | 825.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 758 | 826.09 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 769 | 827.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 804 | 831.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 817 | 833.26 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 824 | 834.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 875 | 840.82 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 899 | 843.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 909 | 844.03 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 911 | 844.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 9 |
| 923 | 844.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 926 | 844.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 21 |
| 927 | 845.03 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 5 |
| 945 | 846.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 989 | 850.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 8 |
| 999 | 852.09 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 18 |