BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0266900 Os03g0266900|AK119243
(154 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59720.1 | chr5:24062632-24063117 FORWARD LENGTH=162 167 2e-42
AT3G46230.1 | chr3:16984263-16984733 REVERSE LENGTH=157 165 7e-42
AT1G53540.1 | chr1:19980510-19980983 FORWARD LENGTH=158 163 4e-41
AT2G29500.1 | chr2:12633279-12633740 REVERSE LENGTH=154 154 2e-38
AT1G07400.1 | chr1:2275148-2275621 FORWARD LENGTH=158 138 1e-33
AT1G59860.1 | chr1:22031474-22031941 FORWARD LENGTH=156 132 8e-32
AT4G10250.1 | chr4:6370537-6371124 FORWARD LENGTH=196 102 8e-23
AT5G37670.1 | chr5:14969035-14969448 FORWARD LENGTH=138 82 9e-17
AT5G12020.1 | chr5:3882409-3882876 REVERSE LENGTH=156 73 6e-14
AT5G12030.1 | chr5:3884214-3884684 REVERSE LENGTH=157 72 1e-13
AT4G27670.1 | chr4:13819048-13819895 REVERSE LENGTH=228 47 6e-06
>AT5G59720.1 | chr5:24062632-24063117 FORWARD LENGTH=162
Length = 161
Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
Query: 1 MSMI------RRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKET 54
MS+I RRSNVFDPFS DLW A D AAF AR+DWKET
Sbjct: 1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTAR-DVAAFTNARVDWKET 59
Query: 55 PEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFR 114
PEAHVFKAD+PGL D NVLQISGER KE EEK DKWHRVER+SGKF+RRFR
Sbjct: 60 PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 119
Query: 115 LPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
LPEN K E++KA+MENGVL VKSI I+G
Sbjct: 120 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159
>AT3G46230.1 | chr3:16984263-16984733 REVERSE LENGTH=157
Length = 156
Score = 165 bits (418), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 97/150 (64%), Gaps = 4/150 (2%)
Query: 5 RRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVFKADV 64
RR+NVFDPFSLD+W D AAF A++DW+ETPEAHVFKADV
Sbjct: 11 RRTNVFDPFSLDVWDPFEGFLTPGLTNAPAK----DVAAFTNAKVDWRETPEAHVFKADV 66
Query: 65 PGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQI 124
PGL DGN+LQISGER E EEK+D WHRVERSSGKF+RRFRLPEN K E++
Sbjct: 67 PGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEV 126
Query: 125 KASMENGVLXXXXXXXXXXXXDVKSIQITG 154
KASMENGVL +VKS+ I+G
Sbjct: 127 KASMENGVLSVTVPKVQESKPEVKSVDISG 156
>AT1G53540.1 | chr1:19980510-19980983 FORWARD LENGTH=158
Length = 157
Score = 163 bits (412), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 100/160 (62%), Gaps = 9/160 (5%)
Query: 1 MSMI------RRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKET 54
MS+I RR+NVFDPFSLD++ D AAF A++DW+ET
Sbjct: 1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAM---DVAAFTNAKVDWRET 57
Query: 55 PEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFR 114
PEAHVFKAD+PGL DGN+LQISGER E EEK DKWHRVERSSGKF RRFR
Sbjct: 58 PEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFR 117
Query: 115 LPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
LPEN K E+IKASMENGVL +VKSI I+G
Sbjct: 118 LPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157
>AT2G29500.1 | chr2:12633279-12633740 REVERSE LENGTH=154
Length = 153
Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 100/161 (62%), Gaps = 15/161 (9%)
Query: 1 MSMI-------RRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKE 53
MSMI RRSN+FDPFSLD+W R NS A AR+DW+E
Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS-----RENS---AIVNARVDWRE 52
Query: 54 TPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRF 113
TPEAHVFKAD+PGL + +VL+ISGER E+E+K D WHRVERSSG+F RRF
Sbjct: 53 TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 112
Query: 114 RLPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
RLPEN K +Q+KA+MENGVL DVKSIQI+G
Sbjct: 113 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153
>AT1G07400.1 | chr1:2275148-2275621 FORWARD LENGTH=158
Length = 157
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 93/153 (60%), Gaps = 10/153 (6%)
Query: 5 RRSN-VFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVFKAD 63
RRSN +FDPFSLD+W + + +A AR+DWKET EAHVFKAD
Sbjct: 12 RRSNSIFDPFSLDVWDPFKELQFPSS-------LSGETSAITNARVDWKETAEAHVFKAD 64
Query: 64 VPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQ 123
+PG+ D +VL+ISGER E+EEK D WHRVERSSG+F R+F+LPEN K +Q
Sbjct: 65 LPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQ 124
Query: 124 IKASMENGVLXXX--XXXXXXXXXDVKSIQITG 154
+KASMENGVL VKSI I+G
Sbjct: 125 VKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157
>AT1G59860.1 | chr1:22031474-22031941 FORWARD LENGTH=156
Length = 155
Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 89/147 (60%), Gaps = 12/147 (8%)
Query: 10 FDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVFKADVPGLXX 69
FDPFSLD+W +S ++A A AR+DWKET EAHVFKAD+PG+
Sbjct: 19 FDPFSLDVWDPFKELQF----------PSSSSSAIANARVDWKETAEAHVFKADLPGMKK 68
Query: 70 XXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASME 129
D +VL+ISGER E+EEK D WHRVERSSG F R+FRLPEN K +Q+KASME
Sbjct: 69 EEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASME 128
Query: 130 NGVLXXX--XXXXXXXXXDVKSIQITG 154
NGVL VKSI I+G
Sbjct: 129 NGVLTVTVPKVETNKKKAQVKSIDISG 155
>AT4G10250.1 | chr4:6370537-6371124 FORWARD LENGTH=196
Length = 195
Score = 102 bits (254), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%)
Query: 41 AAAFAGARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWH 100
+ A + AR+DWKET E H D+PGL + VL++SGER +E+E+K D+WH
Sbjct: 65 SVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWH 124
Query: 101 RVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
RVERS GKF R+F+LP+N E +KA +ENGVL
Sbjct: 125 RVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157
>AT5G37670.1 | chr5:14969035-14969448 FORWARD LENGTH=138
Length = 137
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 47 ARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSS 106
A IDW E+ +H+FK +VPG +GNVL I GE IKE++++ WH ER +
Sbjct: 22 ALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREA 81
Query: 107 -----GKFLRRFRLPENTKPEQIKASMENGVL 133
+FLRR LPEN K +Q+KA +ENGVL
Sbjct: 82 FSGGGSEFLRRIELPENVKVDQVKAYVENGVL 113
>AT5G12020.1 | chr5:3882409-3882876 REVERSE LENGTH=156
Length = 155
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 40 DAAAFAGARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTD-K 98
DA A A D E P A+ F D+PG+ + NVL +SGER +E +E K
Sbjct: 38 DAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVK 97
Query: 99 WHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
+ R+ER GKF+R+F+LPEN ++I A +GVL
Sbjct: 98 YVRMERRMGKFMRKFQLPENADLDKISAVCHDGVL 132
>AT5G12030.1 | chr5:3884214-3884684 REVERSE LENGTH=157
Length = 156
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 40 DAAAFAGARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTD-K 98
DA A A D E P+A+VF D+PG+ + NVL +SG+R ++ +E K
Sbjct: 39 DAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVK 98
Query: 99 WHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
+ R+ER GKF+R+F+LP+N E+I A+ +GVL
Sbjct: 99 FVRMERRMGKFMRKFQLPDNADLEKISAACNDGVL 133
>AT4G27670.1 | chr4:13819048-13819895 REVERSE LENGTH=228
Length = 227
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 38 NSDAAAFAGARIDWKETPEAHVFKA--DVPGLXXXXXXXXXXDGNVLQISGERIKEQEEK 95
N + + R W E H K D+PGL D NVL I GE+ KE +
Sbjct: 116 NRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVED-NVLVIKGEQKKEDSD- 173
Query: 96 TDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
D W RS + R +LP+N + ++IKA ++NGVL
Sbjct: 174 -DSWS--GRSVSSYGTRLQLPDNCEKDKIKAELKNGVL 208
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,367,719
Number of extensions: 72015
Number of successful extensions: 203
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 201
Number of HSP's successfully gapped: 11
Length of query: 154
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 64
Effective length of database: 8,639,129
Effective search space: 552904256
Effective search space used: 552904256
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 107 (45.8 bits)