Os01g0184200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 17.5 kDa class II heat shock protein.
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Os01g0184200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 17.5 kDa class II heat shock protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.96 | 0.431 | 9.63 | -0.441 | 0.505 | -1.21 | 0.404 | -0.782 | 0.00833 | 17.6 | 24.7 | 97 | -- | -- |
| 84.89 | 0.429 | 9.63 | -0.538 | 0.498 | -1.13 | 0.484 | -- | -0.0168 | 17.4 | 24.83 | 88 | -- | -- |
| 83 | 0.424 | 9.6 | -0.431 | 0.519 | -1.65 | -- | -1.59 | 0.0685 | 17.3 | 22.29 | 131 | -- | -- |
| 85.4 | 0.43 | 9.62 | -0.552 | 0.53 | -1.25 | -- | -- | 0.0435 | 17.2 | 22.95 | 121 | -- | -- |
| 93.51 | 0.45 | 9.63 | -0.471 | -- | -1.34 | -- | -0.8 | -0.0539 | -- | 26.92 | 142 | -- | -- |
| 102.82 | 0.475 | 9.59 | -0.281 | 0.644 | -- | 0.533 | -- | 0.196 | 16.6 | -- | -- | -- | -- |
| 103.58 | 0.477 | 9.59 | -0.278 | 0.647 | -- | -- | -- | 0.198 | 16.5 | -- | -- | -- | -- |
| 94.3 | 0.452 | 9.65 | -0.621 | -- | -1.32 | -- | -- | -0.0943 | -- | 27.26 | 133 | -- | -- |
| 92.05 | 0.449 | 9.61 | -- | 0.584 | -1.01 | -- | -- | 0.121 | 17.3 | 22.95 | 121 | -- | -- |
| 125.92 | 0.524 | 9.58 | -0.303 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 105.62 | 0.481 | 9.58 | -- | 0.652 | -- | -- | -- | 0.229 | 16.5 | -- | -- | -- | -- |
| 103.67 | 0.474 | 9.62 | -- | -- | -1.12 | -- | -- | 0.0125 | -- | 27.45 | 131 | -- | -- |
| 128.34 | 0.529 | 9.58 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 2 | 76.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 3 | 76.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 5 | 76.39 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 11 | 77.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 20 | 78.01 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 34 | 78.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 112 | 80.98 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 120 | 81.23 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 138 | 81.54 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 141 | 81.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 152 | 81.74 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 173 | 82.10 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 16 |
| 182 | 82.16 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 208 | 82.50 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 216 | 82.56 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 237 | 82.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 244 | 83.01 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 22 |
| 246 | 83.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 257 | 83.13 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 293 | 83.52 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 305 | 83.61 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 344 | 84.01 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 349 | 84.04 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 351 | 84.04 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 355 | 84.11 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 378 | 84.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 385 | 84.30 | temperature | 30.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 399 | 84.35 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 408 | 84.42 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 415 | 84.45 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 418 | 84.46 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 431 | 84.53 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 436 | 84.56 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 437 | 84.56 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 449 | 84.61 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 470 | 84.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 485 | 84.74 | temperature | 10.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 493 | 84.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 495 | 84.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 498 | 84.77 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 504 | 84.80 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 535 | 84.90 | temperature | 20.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 571 | 85.03 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 582 | 85.08 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 585 | 85.11 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 588 | 85.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 605 | 85.20 | temperature | 20.0 | 30 | < th | dose dependent | sin | 23 | NA |
| 611 | 85.21 | temperature | 20.0 | 90 | > th | dose independent | sin | 5 | NA |
| 621 | 85.24 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 629 | 85.26 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 635 | 85.27 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 639 | 85.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 641 | 85.28 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 642 | 85.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 645 | 85.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 647 | 85.28 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 676 | 85.38 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 720 | 85.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 731 | 85.55 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 754 | 85.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 764 | 85.63 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 769 | 85.64 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 777 | 85.66 | temperature | 20.0 | 90 | < th | dose independent | sin | 4 | NA |
| 780 | 85.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 787 | 85.67 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 799 | 85.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 801 | 85.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 808 | 85.72 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 814 | 85.76 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 820 | 85.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 840 | 85.85 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 850 | 85.87 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 853 | 85.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 868 | 85.93 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 871 | 85.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 872 | 85.94 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 890 | 85.99 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 903 | 86.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 922 | 86.07 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 944 | 86.11 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 949 | 86.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 951 | 86.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 952 | 86.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 954 | 86.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 955 | 86.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 962 | 86.12 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 980 | 86.17 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 989 | 86.19 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |