BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0263000 Os03g0263000|AK068934
(258 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0263000 Similar to TINY-like protein 281 5e-76
Os02g0767800 89 3e-18
Os06g0210300 Pathogenesis-related transcriptional factor an... 85 5e-17
Os06g0553700 71 1e-12
Os04g0648900 Similar to Dehydration responsive element bind... 70 1e-12
Os02g0231000 70 2e-12
Os04g0549700 Similar to Dehydration responsive element bind... 68 6e-12
Os11g0242300 68 8e-12
Os01g0200600 Similar to Avr9/Cf-9 rapidly elicited protein ... 67 9e-12
Os04g0550200 Pathogenesis-related transcriptional factor an... 67 1e-11
Os06g0198200 67 1e-11
Os02g0657000 AP2 domain-containing protein Rap211 67 1e-11
Os06g0197900 67 1e-11
Os10g0560700 Similar to Transcriptional factor TINY 66 2e-11
Os08g0454000 66 2e-11
Os02g0656600 Similar to Dehydration responsive element bind... 66 3e-11
>Os03g0263000 Similar to TINY-like protein
Length = 258
Score = 281 bits (718), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 152/258 (58%), Positives = 152/258 (58%)
Query: 1 MVKNTSNKCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPYKGVRMRSWGS 60
MVKNTSNKCI VRPYKGVRMRSWGS
Sbjct: 1 MVKNTSNKCIAAAGATAAAGLGGGAASCSGGGGDGKVTTAAAAALAVRPYKGVRMRSWGS 60
Query: 61 WVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSASSRRRLDIHRG 120
WVSEIRAPHQKRRIWLGSY LLCLKGSDAVLNFPSSASSRRRLDIHRG
Sbjct: 61 WVSEIRAPHQKRRIWLGSYATPEAAARAYDAALLCLKGSDAVLNFPSSASSRRRLDIHRG 120
Query: 121 GTDSAAGDMSPRSIQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
GTDSAAGDMSPRSIQR
Sbjct: 121 GTDSAAGDMSPRSIQRVAAAAAAAFDAAAAAVVVDESCSCSAEAMSSTPTSGATSLSTLG 180
Query: 181 XXXXXDVLDHATTPXXXXXXXXNVCSPPLEGDHELWTELDAFASPKFMDLMAAGGTAFSS 240
DVLDHATTP NVCSPPLEGDHELWTELDAFASPKFMDLMAAGGTAFSS
Sbjct: 181 SSGGGDVLDHATTPSSSSSAAANVCSPPLEGDHELWTELDAFASPKFMDLMAAGGTAFSS 240
Query: 241 PWEEPEEDGELMRLWSFC 258
PWEEPEEDGELMRLWSFC
Sbjct: 241 PWEEPEEDGELMRLWSFC 258
>Os02g0767800
Length = 238
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
YKGVRMRSWGSWVSEIRAP+QK RIWLGSY LLCLKGS A LNFP
Sbjct: 34 YKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSAADLNFP--- 90
Query: 110 SSRRRLDIHRGGTDSAAGDMSPRSIQR 136
L H A MSP+SIQR
Sbjct: 91 ---VHLPFHI-----PAAAMSPKSIQR 109
>Os06g0210300 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 272
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAV-LNFPSS 108
YKGVRMRSWGSWVSEIRAP QK RIWLGSY LLCLKGS A LNFP
Sbjct: 70 YKGVRMRSWGSWVSEIRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGSAAADLNFPV- 128
Query: 109 ASSRRRLDIHRGGTDSAAGDMSPRSIQR 136
RL D A MSP+SIQR
Sbjct: 129 -----RLPF-----DLPAAAMSPKSIQR 146
>Os06g0553700
Length = 263
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVRMR+WG WVSEIR P +K RIWLG++ L +KG AVLNFP +A
Sbjct: 51 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPGAA 110
Query: 110 SSRRR 114
+S R
Sbjct: 111 ASLPR 115
>Os04g0648900 Similar to Dehydration responsive element binding protein 2F
(DREB2F protein)
Length = 233
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVRMR WG WV+EIR PH++ RIWLGSY + L+G A LNFP
Sbjct: 62 YRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFPEEI 121
Query: 110 SS 111
SS
Sbjct: 122 SS 123
>Os02g0231000
Length = 247
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVRMR+WG WVSEIR P +K RIWLG++ L +KG AVLNFP A
Sbjct: 46 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDMA 105
Query: 110 SSRRR 114
+S R
Sbjct: 106 ASLPR 110
>Os04g0549700 Similar to Dehydration responsive element binding protein 1F
(DREB1F protein)
Length = 284
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 37/60 (61%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVR RSWG WVSEIR P +K RIWLG++ L +KG +A LNFP SA
Sbjct: 118 YRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRNAHLNFPDSA 177
>Os11g0242300
Length = 201
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 40/72 (55%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVR R WG WVSEIR P +K RIWLGS+ L L+G DA LNFP+ A
Sbjct: 21 YRGVRKRKWGKWVSEIREPGKKTRIWLGSFESPEMAAVAHDVAALRLRGRDARLNFPAIA 80
Query: 110 SSRRRLDIHRGG 121
RR D G
Sbjct: 81 HRFRRPDTAEPG 92
>Os01g0200600 Similar to Avr9/Cf-9 rapidly elicited protein 111A
Length = 228
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVRMR+WG WVSEIR P +K RIWLG++ L +KG+ AVLNFP A
Sbjct: 46 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPCPEMAARAHDVAALSIKGARAVLNFPDLA 105
Query: 110 SSRRRLDIHRGGTDSAAGDMSPRSIQ 135
+ R ++PR +Q
Sbjct: 106 PALPR-----------PASLAPRDVQ 120
>Os04g0550200 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 217
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 36/60 (60%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVRMRSWG WVSEIR P +K RIWLG++ L +KG A LNFP A
Sbjct: 47 YRGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALAIKGRTAHLNFPDLA 106
>Os06g0198200
Length = 191
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAV--LNFPS 107
YKGVR+R WG WV+EIR P+ ++RIWLGSY +CL+G +A+ LNF
Sbjct: 16 YKGVRLRQWGKWVAEIRLPNSRKRIWLGSYYTPEKAARAFDAAFICLRGGEAIAGLNFTE 75
Query: 108 S 108
S
Sbjct: 76 S 76
>Os02g0657000 AP2 domain-containing protein Rap211
Length = 225
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFP 106
Y+GVRMRSWG WVSEIR P +K RIWLG++ L +KG A LNFP
Sbjct: 50 YRGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALAIKGRAAHLNFP 106
>Os06g0197900
Length = 124
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 48 RPYKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAV--LNF 105
R Y+GVR+R WG WV+EIR P+ +RIWLGSY +CL+G +A+ LNF
Sbjct: 20 RKYRGVRLRQWGKWVAEIRLPNSLKRIWLGSYDSPEKAARAFDAAFICLRGGEAIAGLNF 79
Query: 106 PSS 108
P S
Sbjct: 80 PES 82
>Os10g0560700 Similar to Transcriptional factor TINY
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVRMR+WG WVSEIR P +K RIWLG++ L +KG A LNFP A
Sbjct: 96 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTADMAARAHDVAALAIKGRAAHLNFPDLA 155
Query: 110 SSRRRLDIHRGGTDSAAGDMSPRSIQ 135
G A SP+ +Q
Sbjct: 156 -----------GVLPRAASASPKDVQ 170
>Os08g0454000
Length = 243
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 48 RPYKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAV--LNF 105
R YKGVR+R WG WVSEIR P+ + RIWLGSY +CL+GS LNF
Sbjct: 25 RRYKGVRLRKWGRWVSEIRMPNSRERIWLGSYESAEKAARAFDAAAVCLRGSRGAGSLNF 84
Query: 106 PSS--ASSRRRL 115
P S RRR
Sbjct: 85 PESPPPDVRRRF 96
>Os02g0656600 Similar to Dehydration responsive element binding protein 2B
(DREB2B protein)
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 50 YKGVRMRSWGSWVSEIRAPHQKRRIWLGSYXXXXXXXXXXXXXLLCLKGSDAVLNFPSSA 109
Y+GVR RSWG WVSEIR P +K RIWLG++ L +KG A LNFPS A
Sbjct: 99 YRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRAAHLNFPSLA 158
Query: 110 SS 111
+
Sbjct: 159 HT 160
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,345,256
Number of extensions: 195553
Number of successful extensions: 520
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 546
Number of HSP's successfully gapped: 18
Length of query: 258
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 159
Effective length of database: 11,866,615
Effective search space: 1886791785
Effective search space used: 1886791785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)