Os02g0767800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os02g0767800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 352.49 | 0.882 | 3.83 | 0.362 | 0.499 | 1.38 | 0.102 | 0.661 | -0.139 | 11.8 | 2 | 44 | -- | -- |
| 353.1 | 0.875 | 3.82 | 0.36 | 0.502 | 1.32 | 0.175 | -- | -0.129 | 11.9 | 1.942 | 43 | -- | -- |
| 352.53 | 0.874 | 3.83 | 0.364 | 0.499 | 1.37 | -- | 0.704 | -0.14 | 11.9 | 2 | 43 | -- | -- |
| 353.25 | 0.875 | 3.82 | 0.359 | 0.496 | 1.31 | -- | -- | -0.128 | 11.9 | 1.896 | 43 | -- | -- |
| 366.81 | 0.892 | 3.84 | 0.414 | -- | 1.59 | -- | 0.562 | -0.137 | -- | 1.8 | 43 | -- | -- |
| 378.39 | 0.912 | 3.83 | 0.0453 | 0.906 | -- | -0.281 | -- | -0.171 | 14.3 | -- | -- | -- | -- |
| 378.68 | 0.911 | 3.83 | 0.0373 | 0.905 | -- | -- | -- | -0.173 | 14.2 | -- | -- | -- | -- |
| 367.27 | 0.893 | 3.83 | 0.409 | -- | 1.55 | -- | -- | -0.128 | -- | 1.7 | 43 | -- | -- |
| 356.28 | 0.879 | 3.83 | -- | 0.522 | 1.16 | -- | -- | -0.164 | 12.3 | 2 | 43 | -- | -- |
| 427.45 | 0.966 | 3.84 | -0.000744 | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
| 378.72 | 0.91 | 3.83 | -- | 0.904 | -- | -- | -- | -0.177 | 14.2 | -- | -- | -- | -- |
| 371.36 | 0.898 | 3.84 | -- | -- | 1.44 | -- | -- | -0.173 | -- | 1.8 | 43 | -- | -- |
| 427.45 | 0.965 | 3.84 | -- | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 344.99 | wind | 3 | 90 | > th | dose independent | rect. | 6 | 13 |
| 4 | 347.06 | wind | 3 | 90 | > th | dose independent | rect. | 3 | 16 |
| 7 | 348.06 | wind | 9 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 8 | 348.14 | wind | 3 | 90 | < th | dose independent | sin | 23 | NA |
| 11 | 348.50 | wind | 3 | 90 | > th | dose independent | rect. | 6 | 17 |
| 12 | 348.65 | wind | 1 | 30 | > th | dose dependent | rect. | 7 | 12 |
| 13 | 348.84 | wind | 3 | 90 | > th | dose independent | sin | 23 | NA |
| 17 | 349.15 | wind | 5 | 30 | < th | dose independent | rect. | 23 | 23 |
| 20 | 349.50 | wind | 9 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 23 | 349.68 | wind | 3 | 90 | > th | dose independent | rect. | 21 | 22 |
| 32 | 350.44 | wind | 3 | 90 | > th | dose independent | rect. | 3 | 20 |
| 34 | 350.61 | wind | 1 | 30 | > th | dose dependent | rect. | 7 | 16 |
| 37 | 350.76 | wind | 1 | 30 | > th | dose dependent | rect. | 7 | 18 |
| 45 | 351.29 | wind | 5 | 30 | < th | dose independent | rect. | 19 | 23 |
| 52 | 351.56 | wind | 1 | 30 | > th | dose dependent | sin | 23 | NA |
| 53 | 351.57 | wind | 1 | 30 | > th | dose dependent | rect. | 9 | 10 |
| 56 | 351.65 | wind | 3 | 90 | < th | dose independent | rect. | 3 | 23 |
| 73 | 352.02 | wind | 9 | 30 | < th | dose dependent | sin | 22 | NA |
| 79 | 352.12 | wind | 3 | 90 | > th | dose independent | rect. | 13 | 23 |
| 84 | 352.41 | wind | 1 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 88 | 352.44 | wind | 1 | 30 | > th | dose dependent | rect. | 9 | 16 |
| 94 | 352.60 | wind | 1 | 30 | > th | dose dependent | rect. | 2 | 17 |
| 95 | 352.61 | wind | 3 | 90 | < th | dose independent | rect. | 5 | 16 |
| 111 | 352.98 | wind | 3 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 134 | 353.31 | wind | 1 | 90 | > th | dose dependent | rect. | 21 | 22 |
| 147 | 353.60 | wind | 9 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 161 | 353.80 | wind | 1 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 164 | 353.84 | wind | 3 | 90 | > th | dose independent | rect. | 6 | 22 |
| 165 | 353.85 | wind | 1 | 90 | > th | dose dependent | rect. | 2 | 21 |
| 174 | 353.99 | wind | 3 | 90 | < th | dose independent | rect. | 5 | 12 |
| 218 | 354.40 | wind | 5 | 30 | < th | dose independent | rect. | 19 | 21 |
| 269 | 354.83 | wind | 3 | 90 | < th | dose independent | rect. | 7 | 14 |
| 326 | 355.28 | wind | 1 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 354 | 355.50 | wind | 3 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 359 | 355.53 | wind | 5 | 270 | < th | dose independent | rect. | 3 | 11 |
| 368 | 355.57 | wind | 3 | 30 | > th | dose dependent | no | NA | NA |
| 382 | 355.63 | humidity | 90 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 387 | 355.65 | wind | 3 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 392 | 355.69 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 3 |
| 394 | 355.71 | wind | 3 | 90 | > th | dose independent | no | NA | NA |
| 397 | 355.72 | humidity | 50 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 435 | 356.06 | wind | 3 | 90 | < th | dose independent | rect. | 3 | 18 |
| 498 | 356.47 | wind | 3 | 90 | < th | dose independent | no | NA | NA |
| 505 | 356.49 | wind | 3 | 90 | < th | dose independent | rect. | 1 | 23 |
| 509 | 356.51 | humidity | 90 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 537 | 356.65 | wind | 3 | 90 | < th | dose independent | rect. | 17 | 23 |
| 542 | 356.68 | humidity | 80 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 546 | 356.71 | wind | 5 | 30 | < th | dose dependent | rect. | 5 | 17 |
| 576 | 356.86 | humidity | 80 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 582 | 356.89 | humidity | 90 | 30 | < th | dose dependent | rect. | 11 | 8 |
| 592 | 356.93 | humidity | 90 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 610 | 357.01 | wind | 3 | 90 | > th | dose independent | rect. | 9 | 23 |
| 635 | 357.12 | wind | 3 | 90 | < th | dose independent | rect. | 15 | 23 |
| 637 | 357.12 | wind | 9 | 90 | < th | dose dependent | no | NA | NA |
| 648 | 357.17 | humidity | 90 | 30 | < th | dose dependent | rect. | 11 | 12 |
| 664 | 357.25 | humidity | 90 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 676 | 357.31 | wind | 3 | 90 | < th | dose independent | rect. | 7 | 11 |
| 698 | 357.39 | wind | 5 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 703 | 357.41 | humidity | 50 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 761 | 357.66 | wind | 3 | 90 | < th | dose independent | rect. | 3 | 14 |
| 763 | 357.66 | wind | 3 | 90 | < th | dose independent | rect. | 21 | 23 |
| 772 | 357.69 | wind | 3 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 792 | 357.78 | wind | 3 | 90 | < th | dose independent | rect. | 13 | 23 |
| 843 | 357.94 | humidity | 90 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 871 | 358.02 | wind | 5 | 30 | < th | dose dependent | rect. | 8 | 14 |
| 909 | 358.14 | wind | 9 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 913 | 358.16 | wind | 3 | 90 | < th | dose independent | rect. | 5 | 23 |
| 916 | 358.17 | humidity | 90 | 90 | < th | dose dependent | sin | 22 | NA |
| 924 | 358.19 | wind | 9 | 30 | < th | dose independent | rect. | 23 | 23 |
| 931 | 358.21 | humidity | 50 | 10 | > th | dose independent | rect. | 23 | 23 |
| 957 | 358.28 | wind | 7 | 10 | < th | dose independent | rect. | 12 | 23 |
| 977 | 358.34 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 994 | 358.38 | humidity | 90 | 90 | < th | dose dependent | rect. | 2 | 21 |