BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0120400 Os03g0120400|AK070517
(193 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0120400 Heavy metal transport/detoxification protein d... 369 e-103
Os10g0537400 197 5e-51
Os03g0383900 Heavy metal transport/detoxification protein d... 100 6e-22
Os01g0758000 Heavy metal transport/detoxification protein d... 98 3e-21
Os03g0156600 Similar to Farnesylated protein (ATFP6) 90 8e-19
Os01g0507700 Heavy metal transport/detoxification protein d... 87 8e-18
Os08g0403300 Heavy metal transport/detoxification protein d... 87 1e-17
Os04g0244800 Heavy metal transport/detoxification protein d... 82 2e-16
Os12g0144600 Heavy metal transport/detoxification protein d... 69 3e-12
Os11g0147500 Heavy metal transport/detoxification protein d... 68 5e-12
Os06g0542300 Heavy metal transport/detoxification protein d... 66 1e-11
Os08g0205400 Heavy metal transport/detoxification protein d... 65 4e-11
Os02g0530100 Heavy metal transport/detoxification protein d... 64 8e-11
>Os03g0120400 Heavy metal transport/detoxification protein domain containing
protein
Length = 193
Score = 369 bits (946), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/193 (92%), Positives = 179/193 (92%)
Query: 1 MSTVSSALSSFLYCCFSPTXXXXXXXXXXXXXXSSHPTSTNTYYYEGGLAGRRMGRSRPL 60
MSTVSSALSSFLYCCFSPT SSHPTSTNTYYYEGGLAGRRMGRSRPL
Sbjct: 1 MSTVSSALSSFLYCCFSPTGGHRHGHRAGAYYYSSHPTSTNTYYYEGGLAGRRMGRSRPL 60
Query: 61 SLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRA 120
SLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRA
Sbjct: 61 SLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRA 120
Query: 121 GKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGADPVSN 180
GKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGADPVSN
Sbjct: 121 GKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGADPVSN 180
Query: 181 LFNDDDVNACSIM 193
LFNDDDVNACSIM
Sbjct: 181 LFNDDDVNACSIM 193
>Os10g0537400
Length = 185
Score = 197 bits (500), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 59 PLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVR 118
P+SLQTVELKVRMCC GCERVV+ AL LRGVDSVEV++ MEKV VTGYV+R RVL+EVR
Sbjct: 49 PVSLQTVELKVRMCCEGCERVVRSALANLRGVDSVEVDVAMEKVRVTGYVDRGRVLREVR 108
Query: 119 RAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGY-NGDKHGHLPEPHRGADP 177
R+GKKAEFWP+ P FTS K+YF D E++R SYNY+R GY +GD+HG + EP RGAD
Sbjct: 109 RSGKKAEFWPSGGTPRRFTSEKEYFRDGEAYRGSYNYHRRGYGDGDRHGWMREPARGADA 168
Query: 178 VSNLFNDDDVN-ACSIM 193
VSN+FNDDDV+ AC+IM
Sbjct: 169 VSNMFNDDDVSAACAIM 185
>Os03g0383900 Heavy metal transport/detoxification protein domain containing
protein
Length = 157
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
Query: 57 SRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKE 116
S+ LQTVELKVRM C GCE VK+AL L+GV+SV++ + +KVTV+GYVE +VL++
Sbjct: 24 SKRRQLQTVELKVRMDCDGCELKVKNALSTLKGVESVKINRKQQKVTVSGYVEASKVLRK 83
Query: 117 VRRAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGAD 176
+ GKK+E WP +P Y +++ Y R + + ++ R +
Sbjct: 84 AQSTGKKSELWPY--VP-YSAASQPYVAAAAYDRRAPPGHVRNVEASSAAYVSGGGRTEE 140
Query: 177 PVSNLFNDDDVNACSIM 193
++NLFND+D NACS+M
Sbjct: 141 RLTNLFNDEDPNACSLM 157
>Os01g0758000 Heavy metal transport/detoxification protein domain containing
protein
Length = 158
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 28/159 (17%)
Query: 62 LQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRAG 121
+ VE+ V M C+GCE+ ++ A+ ++ GVD VE+++E +KVTV G VE+++VLK VRR G
Sbjct: 1 MTIVEMSVHMDCAGCEKKIRKAIQRMEGVDDVEIDMERQKVTVNGNVEQKKVLKAVRRTG 60
Query: 122 KKAEFWPNP-------------------DLPLYFTSAKDYFHDEESFRP--SYNYYRHGY 160
++A WP+P + Y A H + RP SYNYY+HGY
Sbjct: 61 RRAVLWPHPYTGGGVVAGGTVHVLAQQQNYHQYHPGAGVQAHAAHAARPTSSYNYYKHGY 120
Query: 161 NGDKHGHLPEPHRGADP------VSNLFNDDDVNACSIM 193
+ D + H GA+ ++ F+D++ +CS+M
Sbjct: 121 D-DSRLYGGYYHHGANSAVVGTRATDYFSDENPQSCSVM 158
>Os03g0156600 Similar to Farnesylated protein (ATFP6)
Length = 155
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 49 LAGRRMGRSRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYV 108
L + + + +P Q VE+KVRM C GCER V+ A+ +++GV SVEV+ + KVTVTGYV
Sbjct: 13 LPAKILLKKKPKQFQKVEVKVRMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYV 72
Query: 109 ERQRVLKEV-RRAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGH 167
E++ V+ + RRAGKKAE WP +P Y Y + Y R+
Sbjct: 73 EQEEVVGRLRRRAGKKAEPWPY--VP-YDVVPHPYAPGAYDKKAPPGYVRNALADPDAAP 129
Query: 168 LPEPHRGADPVSNLFNDDDVNACSIM 193
L + +++ F+D++ N+C++M
Sbjct: 130 LARATEEEEKLASAFSDENPNSCAVM 155
>Os01g0507700 Heavy metal transport/detoxification protein domain containing
protein
Length = 151
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 26/149 (17%)
Query: 53 RMGRSRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQR 112
++ + RPL QTV +KV+M C GCER VK+A+ +RGV SV V + + TVTGYVE +
Sbjct: 21 KLRKKRPL--QTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAVNPKQSRCTVTGYVEASK 78
Query: 113 VLKEVRRAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLP--E 170
VL+ V+ GK AE WP +P T +Y Y Y+
Sbjct: 79 VLERVKSTGKAAEMWPY--VPYTMT--------------TYPYVGGAYDKKAPAGFVRGN 122
Query: 171 PHRGADPVS------NLFNDDDVNACSIM 193
P ADP + +F+D++V++CSIM
Sbjct: 123 PAAMADPSAPEVRYMTMFSDENVDSCSIM 151
>Os08g0403300 Heavy metal transport/detoxification protein domain containing
protein
Length = 150
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 47 GGLAGRRMGRSRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTG 106
GG +G+ + TVELKVRM C GCE V++ L ++GV SVE+ + +KVTV G
Sbjct: 14 GGSSGK-TSHKKKRQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQG 72
Query: 107 YVERQRVLKEVRRAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKH- 165
V+ QRVL+ + GK+ E WP Y Y P Y + NG
Sbjct: 73 MVDTQRVLRRAQSTGKRTELWP------YVPYTNPYVA------PPAAYDKKAPNGHIRR 120
Query: 166 --GHLPEPHRGADPVSNLFNDDDVNACSIM 193
LP + ++ LF+DD+ NAC++M
Sbjct: 121 VDAVLPVTPSQEERLATLFSDDNPNACAVM 150
>Os04g0244800 Heavy metal transport/detoxification protein domain containing
protein
Length = 155
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 62 LQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVR-RA 120
QTVE+KVR+ C GCER +K AL ++GV SVEV + KVTVTGYV+ +V++ V +
Sbjct: 26 FQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRVAYKT 85
Query: 121 GKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGADPVSN 180
GK+ E WP +P Y T A Y + Y R+ + L +
Sbjct: 86 GKRVEPWPY--VP-YDTVAHPYAPGAYDKKAPAGYVRNVVSDPSAAPLARASSTEVRYTA 142
Query: 181 LFNDDDVNACSIM 193
F+D++ NACS+M
Sbjct: 143 AFSDENPNACSVM 155
>Os12g0144600 Heavy metal transport/detoxification protein domain containing
protein
Length = 524
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 54 MGRSRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRV 113
M + L +QT LKV + C GC++ VK L K+ GV ++ E KVTV+G V+ +
Sbjct: 1 MSKEEVLKIQTCVLKVNIHCDGCQKKVKKILHKIEGVYQTSIDAEQGKVTVSGLVDPATI 60
Query: 114 LKEVRRAGKKAEFW 127
+K++ +AGK AE W
Sbjct: 61 IKKLNKAGKPAELW 74
>Os11g0147500 Heavy metal transport/detoxification protein domain containing
protein
Length = 515
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 54 MGRSRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRV 113
M + L +QT LKV + C GC++ VK L K+ GV ++ E KVTV+G V+ +
Sbjct: 1 MSKEEVLKIQTCVLKVNIHCDGCQKKVKKILHKIEGVYQTSIDAEQGKVTVSGLVDPATI 60
Query: 114 LKEVRRAGKKAEFW 127
+K++ +AGK AE W
Sbjct: 61 IKKLNKAGKPAELW 74
>Os06g0542300 Heavy metal transport/detoxification protein domain containing
protein
Length = 183
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 62 LQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRAG 121
+ VE+++ + C GCE V+ AL +L+GVD V+V+ KVTVTG +++VL+ RR+G
Sbjct: 1 MTIVEMQMNIDCDGCEDNVRKALQRLQGVDYVDVDRVRGKVTVTGSASQKKVLRAARRSG 60
Query: 122 KKAEFWPN 129
+ A WP+
Sbjct: 61 RIAVLWPS 68
>Os08g0205400 Heavy metal transport/detoxification protein domain containing
protein
Length = 81
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 63 QTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRAGK 122
+TV L+V M C GC VK L K++GV+S +V+++ +KVTV G V VL+ V + GK
Sbjct: 3 ETVVLRVGMSCEGCVGAVKRVLGKMQGVESFDVDIKEQKVTVKGNVTPDAVLQTVSKTGK 62
Query: 123 KAEFWPNPDLPLYFTSA 139
K FW P+ T+A
Sbjct: 63 KTSFWDAEPAPVEATAA 79
>Os02g0530100 Heavy metal transport/detoxification protein domain containing
protein
Length = 252
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 60 LSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRR 119
++ +TV LKV M C GC V+ L K+ GV++ ++++E +KVTV G V+ + V + V +
Sbjct: 121 VTTKTVVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSK 180
Query: 120 AGKKAEFW 127
GKK FW
Sbjct: 181 TGKKTSFW 188
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,597,635
Number of extensions: 273856
Number of successful extensions: 635
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 632
Number of HSP's successfully gapped: 13
Length of query: 193
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 98
Effective length of database: 12,075,471
Effective search space: 1183396158
Effective search space used: 1183396158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)