Os03g0156600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Farnesylated protein (ATFP6).
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Os03g0156600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Farnesylated protein (ATFP6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67 | 0.385 | 3.19 | -0.839 | 0.17 | 44.5 | -0.158 | -111 | 4.57e-06 | 9.44 | 46.68 | 10 | -- | -- |
| 67 | 0.384 | 2.9 | -0.101 | 0.17 | 1.84 | -0.161 | -- | 9.39e-05 | 9.42 | 46.68 | 10 | -- | -- |
| 67.07 | 0.381 | 3.19 | -0.853 | 0.171 | 44.8 | -- | -112 | -0.000164 | 9.77 | 47.06 | 9 | -- | -- |
| 67.09 | 0.384 | 2.9 | -0.105 | 0.17 | 1.82 | -- | -- | 0.000171 | 9.75 | 45.88 | 8 | -- | -- |
| 68.8 | 0.386 | 3.19 | -0.849 | -- | 44.6 | -- | -111 | 0.000584 | -- | 46.58 | 9 | -- | -- |
| 76.59 | 0.41 | 2.9 | -0.0336 | 0.205 | -- | 0.13 | -- | -0.0062 | 10.5 | -- | -- | -- | -- |
| 76.65 | 0.41 | 2.9 | -0.0289 | 0.206 | -- | -- | -- | -0.00619 | 10.2 | -- | -- | -- | -- |
| 68.8 | 0.388 | 2.91 | -0.109 | -- | 1.89 | -- | -- | 0.000624 | -- | 45.79 | 3 | -- | -- |
| 67.37 | 0.384 | 2.9 | -- | 0.171 | 1.78 | -- | -- | 0.0115 | 9.81 | 45.88 | 8 | -- | -- |
| 79.22 | 0.416 | 2.91 | -0.032 | -- | -- | -- | -- | -0.00666 | -- | -- | -- | -- | -- |
| 76.67 | 0.41 | 2.9 | -- | 0.206 | -- | -- | -- | -0.00297 | 10.2 | -- | -- | -- | -- |
| 69.11 | 0.388 | 2.9 | -- | -- | 1.85 | -- | -- | 0.0124 | -- | 45.62 | 4 | -- | -- |
| 79.24 | 0.416 | 2.91 | -- | -- | -- | -- | -- | -0.00312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.61 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 27 | 65.61 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 161 | 66.80 | humidity | 50 | 90 | < th | dose independent | rect. | 17 | 18 |
| 162 | 66.80 | humidity | 50 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 175 | 66.99 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 3 |
| 213 | 67.00 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 1 |
| 454 | 67.00 | humidity | 50 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 808 | 67.03 | humidity | 50 | 90 | < th | dose dependent | sin | 8 | NA |
| 811 | 67.04 | humidity | 50 | 10 | < th | dose dependent | sin | 10 | NA |
| 831 | 67.06 | humidity | 50 | 10 | < th | dose dependent | sin | 7 | NA |
| 936 | 67.27 | humidity | 50 | 30 | < th | dose independent | sin | 9 | NA |