BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0156600 Os03g0156600|AK105367
(155 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66110.1 | chr5:26430245-26430778 FORWARD LENGTH=148 131 1e-31
AT4G38580.1 | chr4:18034596-18035693 FORWARD LENGTH=154 114 2e-26
AT4G35060.1 | chr4:16685874-16686419 REVERSE LENGTH=154 107 2e-24
AT1G71050.1 | chr1:26803322-26803946 REVERSE LENGTH=153 104 2e-23
AT1G22990.1 | chr1:8139221-8140045 FORWARD LENGTH=153 103 3e-23
AT4G08570.1 | chr4:5455123-5455975 REVERSE LENGTH=151 91 2e-19
AT4G39700.1 | chr4:18424265-18424906 FORWARD LENGTH=159 84 4e-17
AT5G17450.1 | chr5:5755386-5756743 FORWARD LENGTH=150 82 2e-16
AT1G06330.1 | chr1:1931671-1932266 REVERSE LENGTH=160 71 2e-13
AT3G56891.1 | chr3:21064199-21064922 REVERSE LENGTH=167 69 1e-12
AT2G18196.1 | chr2:7920793-7922268 REVERSE LENGTH=179 64 3e-11
AT1G29100.1 | chr1:10169084-10169619 FORWARD LENGTH=142 61 2e-10
AT4G10465.1 | chr4:6473582-6475137 FORWARD LENGTH=184 57 4e-09
AT1G56210.1 | chr1:21035715-21037019 FORWARD LENGTH=365 55 1e-08
AT5G27690.1 | chr5:9803796-9805036 FORWARD LENGTH=353 54 3e-08
AT1G23000.1 | chr1:8143614-8144865 FORWARD LENGTH=359 51 2e-07
AT3G02960.1 | chr3:667245-668626 REVERSE LENGTH=247 50 4e-07
AT3G05220.1 | chr3:1488808-1491171 FORWARD LENGTH=578 49 8e-07
AT3G06130.1 | chr3:1853048-1854673 REVERSE LENGTH=474 48 2e-06
AT5G37860.1 | chr5:15069578-15070555 REVERSE LENGTH=263 47 3e-06
AT5G63530.1 | chr5:25433279-25435614 FORWARD LENGTH=356 47 3e-06
AT5G19090.1 | chr5:6387910-6389855 FORWARD LENGTH=588 47 4e-06
AT5G50740.3 | chr5:20635983-20637970 REVERSE LENGTH=291 47 4e-06
AT5G03380.1 | chr5:832400-834301 REVERSE LENGTH=393 46 9e-06
>AT5G66110.1 | chr5:26430245-26430778 FORWARD LENGTH=148
Length = 147
Score = 131 bits (329), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 78/122 (63%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
+MDCEGCER+VRK+VE MKGVS V VD KQ+K+TV G+V+ +VV R+ R GKKAE
Sbjct: 26 KMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTGKKAELWP 85
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCA 153
GAYDKKAPPGYVRN RA+ E K SAFSD+NPN+C
Sbjct: 86 YVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKYTSAFSDDNPNACT 145
Query: 154 VM 155
+M
Sbjct: 146 IM 147
>AT4G38580.1 | chr4:18034596-18035693 FORWARD LENGTH=154
Length = 153
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
+MDCEGCERKVR++VE MKGVSSV ++ K +KVTV GYV+ +VV R+ R GKK E
Sbjct: 33 KMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWP 92
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCA 153
G YDKKAP GYVR RA+ E + +AFSDENP +C
Sbjct: 93 YVPYDVVAHPYAAGVYDKKAPSGYVRR-VDDPGVSQLARASSTEVRYTTAFSDENPAACV 151
Query: 154 VM 155
VM
Sbjct: 152 VM 153
>AT4G35060.1 | chr4:16685874-16686419 REVERSE LENGTH=154
Length = 153
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 69/121 (57%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXXX 94
+DCEGCERKVR+A+E M+G+ V ++ KVTV GYVE +VV R+ R GK+AE
Sbjct: 33 IDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKRAELYPF 92
Query: 95 XXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCAV 154
G YD +AP GYVRN RA+ E + +AFSDEN ++C V
Sbjct: 93 VPYDVVAHPYASGVYDNRAPTGYVRNTEYDPHVSRLARASSTEVRYTTAFSDENASACVV 152
Query: 155 M 155
M
Sbjct: 153 M 153
>AT1G71050.1 | chr1:26803322-26803946 REVERSE LENGTH=153
Length = 152
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
+MDC+GCER+V+ AV MKGV SVEV+ K +KVTV+GYVE ++V+ R+ R GKKAE
Sbjct: 35 KMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRI-ERTGKKAEIWP 93
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCA 153
G YDKKAP GYVR E S FSDENPN+C
Sbjct: 94 YVPYNMVAYPYAVGTYDKKAPAGYVRKSEQSQLQLL---PGAPENHYISLFSDENPNACT 150
Query: 154 VM 155
VM
Sbjct: 151 VM 152
>AT1G22990.1 | chr1:8139221-8140045 FORWARD LENGTH=153
Length = 152
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
++DC+GCERK++ AV +KG SVEV+ K +KVTV+GYV+ ++V+ ++ KKAE
Sbjct: 36 KIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWP 95
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCA 153
GAYDK+APPG+VR + ++KL S FSDENPN+C
Sbjct: 96 YVPYTMVAYPYAAGAYDKRAPPGFVRK-----SEQAQAQPGSTDDKLMSLFSDENPNACT 150
Query: 154 VM 155
VM
Sbjct: 151 VM 152
>AT4G08570.1 | chr4:5455123-5455975 REVERSE LENGTH=151
Length = 150
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
R+DCEGCERK++ + +KGV SV+VD K KVTVTGY++ ++V+ + KK E
Sbjct: 34 RIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVL-EAAKSTKKKVELWP 92
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCA 153
AYDKKAPP VR T ++ FSDENPNSCA
Sbjct: 93 YVPYTMVANPYISQAYDKKAPPNMVRK----VPDTASVNETTVDDSYTIMFSDENPNSCA 148
Query: 154 VM 155
+M
Sbjct: 149 IM 150
>AT4G39700.1 | chr4:18424265-18424906 FORWARD LENGTH=159
Length = 158
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
RMDC+GC K++ ++ +KGV +VE++ KQ KVTV+GY + +V+ + + GKKAE
Sbjct: 39 RMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVL-KKAKATGKKAEIWP 97
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPNSCA 153
AYDKKAPPGYVR ++ S FSD+NPN+C+
Sbjct: 98 YVPYNLVAQPYIAQAYDKKAPPGYVRKVDPNVTTGTMA-VYYDDPSYTSLFSDDNPNACS 156
Query: 154 VM 155
+M
Sbjct: 157 IM 158
>AT5G17450.1 | chr5:5755386-5756743 FORWARD LENGTH=150
Length = 149
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
+MDC+GCER+VR V MKGV SVEV+ KQ+++TV G+V+ +V+ R+ + GKKAE
Sbjct: 33 KMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRV-KSTGKKAEFWP 91
Query: 94 XXXXXXXXXXXXXGAYDKKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDENPN-SC 152
G YDK+AP G++RN A EE S FSD+N + +C
Sbjct: 92 YIPQHMVYYPFAPGMYDKRAPAGHIRNPTQSFPT-----ANAPEENYVSLFSDDNVHAAC 146
Query: 153 AVM 155
++M
Sbjct: 147 SIM 149
>AT1G06330.1 | chr1:1931671-1932266 REVERSE LENGTH=160
Length = 159
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
MDC GCE +V+ A+++M+GV +VE+D Q KVTVTGY +Q++V+ ++ R+ G++AE
Sbjct: 18 HMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKV-RKTGRRAELWQ 76
Query: 94 XXXXXXXXXXXXX------------GAYDKKAP----------PGYVRNXXXXXXXXXXX 131
G + AP GY N
Sbjct: 77 LPYNPDHMGGSSSNGGYFYNPQGCNGPINHAAPVPTSSYNYYKHGYDSN-DYSSYRHHPV 135
Query: 132 RATEEEEKLASAFSDENPNSCAVM 155
A+ + S FSDENPN+C++M
Sbjct: 136 HASIFSHQTGSKFSDENPNACSIM 159
>AT3G56891.1 | chr3:21064199-21064922 REVERSE LENGTH=167
Length = 166
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
MDC+GCE+KVR+A+ ++ GV +VE+D + KVTVTGYV++EEV+ ++ +R G+ AE
Sbjct: 24 MDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVL-KMVKRTGRTAE 78
>AT2G18196.1 | chr2:7920793-7922268 REVERSE LENGTH=179
Length = 178
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
RM C GCER V+ A+ +++GV SVEV+ + +VTV GYVE+++V+ + RRAGK+AE
Sbjct: 53 RMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAV-RRAGKRAEFWP 111
Query: 94 XXXXXXXXXXXXXGAYDK----KAPPGYVRNXXXXXXXXXXXRATEE-EEKLASAFSDEN 148
D + Y R+ T ++K+++ F+D+N
Sbjct: 112 YPDMPRYFTSSDHYFKDTTREFRESYNYYRHGYNLSDRHGNIHVTNRGDDKMSNFFNDDN 171
Query: 149 PNSCAVM 155
++C++M
Sbjct: 172 VHACSLM 178
>AT1G29100.1 | chr1:10169084-10169619 FORWARD LENGTH=142
Length = 141
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVV 78
MDC GCE KVRKA+E+M GV V++D KQ +VTVTG EQ++V+
Sbjct: 5 MDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGSAEQKKVL 48
>AT4G10465.1 | chr4:6473582-6475137 FORWARD LENGTH=184
Length = 183
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXX 93
RM C GC R VR A+ +++GV SVEVD + +V V GYV++ +V+ + RRAGK+AE
Sbjct: 58 RMCCTGCVRIVRNAISKLRGVDSVEVDKELGRVRVVGYVDRNKVLKAV-RRAGKRAEFSP 116
Query: 94 XXXXXXXXXXXXXGAYD-----KKAPPGYVRNXXXXXXXXXXXRATEEEEKLASAFSDEN 148
D K++ Y + ++++++ F+D+N
Sbjct: 117 YPEPPLYFTSTQNYFVDPSKEFKESYNYYRHGYNGTEQHGNIPVGSRGDDRVSNMFNDDN 176
Query: 149 PNSCAVM 155
N+C +M
Sbjct: 177 VNACRLM 183
>AT1G56210.1 | chr1:21035715-21037019 FORWARD LENGTH=365
Length = 364
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
+ CEGC+RKV+K + ++GV V++D KQ+KVTV G + E ++ +L +AGK AE
Sbjct: 48 IHCEGCKRKVKKILTSIEGVFKVDIDVKQHKVTVIGIISPEILLKKL-NKAGKNAE 102
>AT5G27690.1 | chr5:9803796-9805036 FORWARD LENGTH=353
Length = 352
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
+ CEGC+RK++K + ++ GV + +D KQ KVTV G VE E ++ ++ +AG+ AE
Sbjct: 38 IHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKI-MKAGRHAE 92
>AT1G23000.1 | chr1:8143614-8144865 FORWARD LENGTH=359
Length = 358
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
+ CEGC +KV+K ++ ++GV V+++A+ KVTV+G V+ ++ +L +AGK AE
Sbjct: 20 NIHCEGCNKKVKKLLQRIEGVCHVKIEAEHQKVTVSGSVDSATLINKL-VKAGKHAE 75
>AT3G02960.1 | chr3:667245-668626 REVERSE LENGTH=247
Length = 246
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXXX 94
M CEGC ++++ +E++KG+ SVE D ++ V V G ++ ++V +++++ GK AE
Sbjct: 134 MHCEGCVHEIKRGIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKLGKHAELLSQ 193
Query: 95 XXXXXXXXXXXXGAYDKKA--------PPGYVRNXXXXXXXXXXXRATEEEEKLASAFSD 146
+++ PP Y + + + FSD
Sbjct: 194 ITEKGKDNNKKNNNKKEESDGNKIFSYPPQY----------------SSQHAYPSQIFSD 237
Query: 147 ENPNSCAVM 155
EN +SC++M
Sbjct: 238 ENVHSCSIM 246
>AT3G05220.1 | chr3:1488808-1491171 FORWARD LENGTH=578
Length = 577
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 37 CEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
CEGC+ KV+K +++++GV SV+ D +Q +VTVTG ++ +V +L ++GK AE
Sbjct: 20 CEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKL-SKSGKHAE 72
>AT3G06130.1 | chr3:1853048-1854673 REVERSE LENGTH=474
Length = 473
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
+ C+GC++KV+K +++++GV + ++D++Q KVTV+G V+ ++ +L ++GK AE
Sbjct: 18 IHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKL-AKSGKHAE 72
>AT5G37860.1 | chr5:15069578-15070555 REVERSE LENGTH=263
Length = 262
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
++C+GC+ KV+K + +++GV SV++D Q V V G ++ E +V +L +R GK A+
Sbjct: 18 INCQGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGNLDPEILVKKLNKR-GKHAQ 72
>AT5G63530.1 | chr5:25433279-25435614 FORWARD LENGTH=356
Length = 355
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKA 89
M CE C +++K + MKGV S E D K ++VTV G E +++V + +R GK A
Sbjct: 178 HMHCEACATEIKKRIMRMKGVESAESDLKSSQVTVKGVFEPQKLVEYVYKRTGKHA 233
>AT5G19090.1 | chr5:6387910-6389855 FORWARD LENGTH=588
Length = 587
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 37 CEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAE 90
C+GC++KV+K +++++GV + ++DA+ KVTV+G V+ ++ +L ++GK AE
Sbjct: 20 CDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKL-LKSGKHAE 72
>AT5G50740.3 | chr5:20635983-20637970 REVERSE LENGTH=291
Length = 290
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 34 RMDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKA 89
M CE C +++K + MKGV SVE D K ++V+V G E++V + +R GK A
Sbjct: 138 HMHCEACAMEIQKRIMRMKGVESVEPDFKASQVSVKGVFTPEKLVEFIYKRIGKHA 193
>AT5G03380.1 | chr5:832400-834301 REVERSE LENGTH=393
Length = 392
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 35 MDCEGCERKVRKAVEEMKGVSSVEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEXXXX 94
M CEGC +K+++ + KGV V++D K NK+TV G V+ EV ++ + + E
Sbjct: 32 MHCEGCGKKIKRIFKHFKGVEDVKIDYKSNKLTVIGNVDPVEVRDKVADKIKRPVELVST 91
Query: 95 XXXXXXXXXXXXGAYDKKAPP 115
G +KK P
Sbjct: 92 VAPPKKETPPSSGGAEKKPSP 112
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.128 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,206,157
Number of extensions: 56817
Number of successful extensions: 197
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 31
Length of query: 155
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 65
Effective length of database: 8,639,129
Effective search space: 561543385
Effective search space used: 561543385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 107 (45.8 bits)