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Os11g0147500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heavy metal transport/detoxification protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.84 (0.0512) R2 : 0.308
β1 : -1.93 (0.199) R2dD : 0.178 R2D : 0.051
β2 : 1.15 (0.124) R2dC : 0.135 R2C : 0.107
β3 : 1.64 (0.202) R2dE : 0.119 R2E : 0.000758
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -4.04 (0.828) R2dD*E : 0.0471 R2D*E : -0.0449
γ1 : -0.262 (0.107) R2dN8 : 0.0128 R2N8 : -0.00263
σ : 0.928
deviance : 397.27
__
_____
C
peak time of C : 9.01
E
wheather : humidity
threshold : 80
memory length : 1294
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
397.58 0.937 6.84 -1.94 1.13 1.6 0.316 -4.01 -0.267 8.8 80.1 1337 -- --
414.44 0.948 6.8 -1.65 1.21 1.4 0.268 -- -0.177 9.13 75 1245 -- --
397.27 0.928 6.84 -1.93 1.15 1.64 -- -4.04 -0.262 9.01 80 1294 -- --
414.7 0.948 6.78 -1.59 1.21 1.36 -- -- -0.166 9.04 74.75 1250 -- --
467.27 1.01 6.87 -1.87 -- 1.49 -- -4 -0.266 -- 82 1404 -- --
456.28 1 6.8 -1.37 1.11 -- 0.53 -- -0.259 8.3 -- -- -- --
457.08 1 6.8 -1.35 1.11 -- -- -- -0.258 8.42 -- -- -- --
489.84 1.03 6.81 -1.58 -- 1.2 -- -- -0.156 -- 75.21 1390 -- --
480.2 1.02 6.73 -- 1.24 1.07 -- -- -0.000207 8.89 74.94 1256 -- --
525.7 1.07 6.83 -1.35 -- -- -- -- -0.247 -- -- -- -- --
505.29 1.05 6.76 -- 1.1 -- -- -- -0.107 8.51 -- -- -- --
551.3 1.09 6.79 -- -- 0.953 -- -- -0.0954 -- 90 1418 -- --
573.54 1.12 6.79 -- -- -- -- -- -0.0973 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 385.30 humidity 80 1440 < th dose independent rect. 24 15
7 385.96 humidity 80 1440 < th dose independent rect. 3 12
11 386.26 humidity 80 1440 < th dose independent rect. 7 8
19 387.71 humidity 80 1440 > th dose independent rect. 3 13
20 387.99 humidity 80 1440 > th dose independent rect. 24 16
33 389.51 humidity 80 1440 < th dose independent sin 3 NA
58 390.93 radiation 10 1440 > th dose independent rect. 11 20
66 392.04 radiation 10 1440 > th dose independent rect. 11 7
80 392.30 humidity 80 1440 > th dose independent sin 2 NA
98 393.40 humidity 80 1440 < th dose independent rect. 11 3
107 393.75 humidity 80 1440 > th dose independent rect. 11 3
113 394.19 humidity 80 1440 < th dose dependent rect. 15 4
129 394.67 humidity 80 1440 < th dose dependent rect. 13 6
130 394.68 radiation 10 1440 < th dose dependent rect. 11 7
134 394.92 humidity 90 270 > th dose dependent rect. 1 19
148 395.34 humidity 90 1440 < th dose dependent rect. 11 8
152 395.43 radiation 10 1440 > th dose independent rect. 11 1
154 395.59 radiation 10 1440 < th dose dependent rect. 11 17
165 395.72 radiation 10 1440 < th dose dependent rect. 11 14
168 395.74 humidity 70 720 > th dose independent rect. 18 9
169 395.74 radiation 10 1440 < th dose dependent rect. 11 11
170 395.75 radiation 10 1440 > th dose independent sin 17 NA
214 396.40 radiation 10 1440 > th dose independent rect. 11 3
232 396.79 humidity 70 720 > th dose independent rect. 17 15
264 397.01 humidity 50 1440 > th dose dependent rect. 11 8
274 397.19 humidity 80 1440 < th dose dependent rect. 13 20
281 397.36 humidity 70 720 < th dose independent rect. 18 14
282 397.37 humidity 80 1440 < th dose dependent rect. 11 22
292 397.61 humidity 70 1440 < th dose dependent rect. 15 17
344 397.98 humidity 70 720 > th dose independent rect. 17 7
348 398.01 humidity 60 1440 > th dose independent rect. 15 4
376 398.31 humidity 80 1440 < th dose dependent sin 18 NA
384 398.35 temperature 20 720 > th dose dependent rect. 17 6
422 398.71 humidity 70 720 < th dose independent rect. 18 2
435 398.74 humidity 60 1440 < th dose independent rect. 15 4
446 398.81 humidity 60 1440 > th dose independent rect. 15 16
447 398.82 humidity 60 1440 > th dose independent rect. 15 14
468 398.92 humidity 60 1440 > th dose independent rect. 15 7
474 398.95 humidity 60 1440 > th dose independent rect. 15 10
487 399.04 humidity 70 1440 > th dose dependent rect. 11 3
518 399.20 radiation 1 1440 < th dose independent rect. 11 19
520 399.22 humidity 70 720 > th dose independent sin 12 NA
530 399.33 humidity 80 1440 < th dose dependent rect. 7 12
542 399.44 humidity 50 1440 > th dose dependent rect. 15 3
573 399.57 humidity 50 1440 > th dose dependent rect. 15 1
576 399.61 humidity 70 720 > th dose independent rect. 17 4
587 399.70 radiation 10 1440 < th dose dependent sin 17 NA
666 400.21 humidity 90 30 > th dose dependent rect. 4 17
698 400.36 humidity 70 1440 < th dose dependent sin 13 NA
846 400.80 humidity 90 270 > th dose dependent rect. 1 13
866 400.97 humidity 80 1440 < th dose dependent no NA NA
867 400.97 humidity 90 1440 < th dose dependent rect. 13 1
874 401.01 radiation 10 1440 < th dose dependent rect. 13 1
927 401.22 humidity 90 10 > th dose independent rect. 4 16
991 401.46 humidity 80 10 > th dose dependent rect. 24 21