Os04g0244800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0244800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.78 | 0.384 | 14.6 | 0.498 | 1.54 | -1.96 | -0.0268 | 3.12 | -0.947 | 4.93 | 92.98 | 415 | 12.2 | -- |
| 72.24 | 0.396 | 14.6 | 0.563 | 1.53 | -1.98 | 0.584 | -- | -0.93 | 4.87 | 93.24 | 448 | 12.5 | -- |
| 65.86 | 0.378 | 14.6 | 0.489 | 1.51 | -2.16 | -- | 3.61 | -0.941 | 4.93 | 93.16 | 412 | 12.9 | -- |
| 73.03 | 0.398 | 14.6 | 0.559 | 1.52 | -1.95 | -- | -- | -0.926 | 4.94 | 93.43 | 448 | 12.7 | -- |
| 175.14 | 0.616 | 14.6 | 0.477 | -- | -1.49 | -- | 4.03 | -0.868 | -- | 93.22 | 365 | 13.6 | -- |
| 97.13 | 0.462 | 14.6 | 0.499 | 1.32 | -- | 0.348 | -- | -0.82 | 5.12 | -- | -- | -- | -- |
| 97.43 | 0.462 | 14.6 | 0.499 | 1.33 | -- | -- | -- | -0.822 | 5.15 | -- | -- | -- | -- |
| 181.59 | 0.628 | 14.6 | 0.582 | -- | -1.21 | -- | -- | -0.839 | -- | 93.77 | 354 | 13.7 | -- |
| 81.13 | 0.419 | 14.6 | -- | 1.53 | -1.93 | -- | -- | -0.969 | 4.96 | 93.59 | 448 | 12.6 | -- |
| 189.67 | 0.644 | 14.6 | 0.546 | -- | -- | -- | -- | -0.788 | -- | -- | -- | -- | -- |
| 103.98 | 0.477 | 14.6 | -- | 1.34 | -- | -- | -- | -0.878 | 5.14 | -- | -- | -- | -- |
| 190.41 | 0.643 | 14.7 | -- | -- | -1.12 | -- | -- | -0.896 | -- | 93.97 | 342 | 13.6 | -- |
| 197.52 | 0.656 | 14.7 | -- | -- | -- | -- | -- | -0.849 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.58 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 5 | 77.16 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 6 | 77.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 13 | 77.47 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 15 | 77.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 17 | 77.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 18 | 77.64 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 72 | 78.71 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 73 | 78.71 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 14 |
| 89 | 79.58 | wind | 1 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 96 | 79.81 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 1 |
| 99 | 79.91 | wind | 1 | 270 | < th | dose independent | rect. | 23 | 2 |
| 104 | 80.09 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 112 | 80.67 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 14 |
| 120 | 80.96 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 3 |
| 136 | 81.27 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 140 | 81.41 | temperature | 20 | 30 | > th | dose independent | rect. | 12 | 16 |
| 152 | 81.62 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 154 | 81.64 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 156 | 81.64 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 158 | 81.64 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 209 | 81.64 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 211 | 81.64 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 213 | 81.64 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 284 | 82.22 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 291 | 82.35 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 308 | 82.59 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 310 | 82.61 | humidity | 60 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 324 | 82.78 | humidity | 90 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 337 | 82.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 338 | 82.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 341 | 82.92 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 357 | 82.95 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 362 | 83.04 | temperature | 10 | 10 | > th | dose dependent | rect. | 14 | 14 |
| 368 | 83.10 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 369 | 83.10 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 371 | 83.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 375 | 83.12 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 411 | 83.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 416 | 83.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 429 | 83.30 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 443 | 83.39 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 450 | 83.40 | humidity | 90 | 270 | > th | dose dependent | sin | 15 | NA |
| 451 | 83.40 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 503 | 83.57 | humidity | 90 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 511 | 83.63 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 21 | 7 |
| 557 | 83.74 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 558 | 83.74 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 23 | 3 |
| 578 | 83.79 | radiation | 10 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 590 | 83.85 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 602 | 83.85 | radiation | 1 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 680 | 84.19 | radiation | 1 | 1440 | < th | dose independent | sin | 19 | NA |
| 695 | 84.24 | radiation | 1 | 1440 | > th | dose independent | sin | 19 | NA |
| 758 | 84.42 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 784 | 84.55 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 792 | 84.61 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 811 | 84.67 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 16 | 10 |
| 838 | 84.75 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 12 | 14 |
| 844 | 84.78 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 891 | 84.88 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 896 | 84.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 7 |
| 932 | 85.04 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 14 | 14 |
| 945 | 85.07 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 976 | 85.13 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 2 |