BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0244800 Os04g0244800|AK121488
(155 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0244800 Heavy metal transport/detoxification protein d... 318 1e-87
Os03g0156600 Similar to Farnesylated protein (ATFP6) 216 5e-57
Os01g0507700 Heavy metal transport/detoxification protein d... 166 5e-42
Os03g0383900 Heavy metal transport/detoxification protein d... 154 2e-38
Os08g0403300 Heavy metal transport/detoxification protein d... 144 2e-35
Os09g0364800 Heavy metal transport/detoxification protein d... 94 4e-20
Os03g0120400 Heavy metal transport/detoxification protein d... 82 2e-16
Os01g0758000 Heavy metal transport/detoxification protein d... 80 5e-16
Os10g0537400 80 7e-16
Os05g0150700 Heavy metal transport/detoxification protein d... 67 5e-12
>Os04g0244800 Heavy metal transport/detoxification protein domain containing
protein
Length = 155
Score = 318 bits (815), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MGIVDVVSEFCSVPRTRRHLKKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVT 60
MGIVDVVSEFCSVPRTRRHLKKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVT
Sbjct: 1 MGIVDVVSEFCSVPRTRRHLKKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVT 60
Query: 61 AKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRN 120
AKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRN
Sbjct: 61 AKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRN 120
Query: 121 VVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM 155
VVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM
Sbjct: 121 VVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM 155
>Os03g0156600 Similar to Farnesylated protein (ATFP6)
Length = 155
Score = 216 bits (550), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/155 (65%), Positives = 125/155 (80%)
Query: 1 MGIVDVVSEFCSVPRTRRHLKKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVT 60
MG+ D+++E +P KK KQFQ VE+KVR+DCEGCERK++KA+E+MKGVSSVEV
Sbjct: 1 MGVDDIIAELRVLPAKILLKKKPKQFQKVEVKVRMDCEGCERKVRKAVEEMKGVSSVEVD 60
Query: 61 AKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRN 120
AKQNKVTVTGYV+ +V+ R+ + GK+ EPWPYVPYD V HPYAPGAYDKKAP GYVRN
Sbjct: 61 AKQNKVTVTGYVEQEEVVGRLRRRAGKKAEPWPYVPYDVVPHPYAPGAYDKKAPPGYVRN 120
Query: 121 VVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM 155
++DP AAPLARA+ E + +AFSDENPN+C+VM
Sbjct: 121 ALADPDAAPLARATEEEEKLASAFSDENPNSCAVM 155
>Os01g0507700 Heavy metal transport/detoxification protein domain containing
protein
Length = 151
Score = 166 bits (421), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 113/157 (71%), Gaps = 8/157 (5%)
Query: 1 MGIVDVVSEFCSVPRTRRHLKKRKQ--FQTVEMKVRIDCEGCERKIKKALEDMKGVSSVE 58
MG++D +S+ CS+ T+ LK RK+ QTV +KV++DCEGCER++K A++ M+GV+SV
Sbjct: 1 MGVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVA 60
Query: 59 VTAKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYV 118
V KQ++ TVTGYV+A KV+ RV TGK E WPYVPY +PY GAYDKKAPAG+V
Sbjct: 61 VNPKQSRCTVTGYVEASKVLERVK-STGKAAEMWPYVPYTMTTYPYVGGAYDKKAPAGFV 119
Query: 119 RNVVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM 155
R +P+A +A S+ EVRY FSDEN ++CS+M
Sbjct: 120 RG---NPAA--MADPSAPEVRYMTMFSDENVDSCSIM 151
>Os03g0383900 Heavy metal transport/detoxification protein domain containing
protein
Length = 157
Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 3/135 (2%)
Query: 22 KRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRV 81
KR+Q QTVE+KVR+DC+GCE K+K AL +KGV SV++ KQ KVTV+GYV+A KV+R+
Sbjct: 25 KRRQLQTVELKVRMDCDGCELKVKNALSTLKGVESVKINRKQQKVTVSGYVEASKVLRK- 83
Query: 82 AYKTGKRVEPWPYVPYDTVAHPY-APGAYDKKAPAGYVRNVVSDPSAAPLARASSTEVRY 140
A TGK+ E WPYVPY + PY A AYD++AP G+VRNV + SAA ++ TE R
Sbjct: 84 AQSTGKKSELWPYVPYSAASQPYVAAAAYDRRAPPGHVRNVEAS-SAAYVSGGGRTEERL 142
Query: 141 TAAFSDENPNACSVM 155
T F+DE+PNACS+M
Sbjct: 143 TNLFNDEDPNACSLM 157
>Os08g0403300 Heavy metal transport/detoxification protein domain containing
protein
Length = 150
Score = 144 bits (364), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 92/137 (67%), Gaps = 11/137 (8%)
Query: 21 KKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRR 80
KK++QF TVE+KVR+DC+GCE K++ L +MKGV SVE+ KQ KVTV G VD +V+RR
Sbjct: 23 KKKRQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEINRKQQKVTVQGMVDTQRVLRR 82
Query: 81 VAYKTGKRVEPWPYVPYDTVAHPYA--PGAYDKKAPAGYVRNVVSDPSAAPLARASSTEV 138
A TGKR E WPYVPY +PY P AYDKKAP G++R V A L S E
Sbjct: 83 -AQSTGKRTELWPYVPY---TNPYVAPPAAYDKKAPNGHIRRV-----DAVLPVTPSQEE 133
Query: 139 RYTAAFSDENPNACSVM 155
R FSD+NPNAC+VM
Sbjct: 134 RLATLFSDDNPNACAVM 150
>Os09g0364800 Heavy metal transport/detoxification protein domain containing
protein
Length = 112
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
Query: 65 KVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRNVVSD 124
KVTV G+V+ KV++RV TGK+ E WPYVPY VAHPYA AYDK+AP G+VR V
Sbjct: 20 KVTVQGFVEPHKVVKRVQ-ATGKKAEIWPYVPYTLVAHPYAAPAYDKRAPPGHVRRV--- 75
Query: 125 PSAAPLARASST------EVRYTAAFSDENPNACSVM 155
+ P+A S E R T FSDENPNACS+M
Sbjct: 76 DAVMPVASYGSAAAAAAPEERLTTMFSDENPNACSIM 112
>Os03g0120400 Heavy metal transport/detoxification protein domain containing
protein
Length = 193
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 26 FQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRVAYKT 85
QTVE+KVR+ C GCER +K AL ++GV SVEV + KVTVTGYV+ +V++ V +
Sbjct: 62 LQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVR-RA 120
Query: 86 GKRVEPWPY--VP-YDTVAHPYAPGAYDKKAPAGYVRNVVSDPSAAPLARASSTEVRYTA 142
GK+ E WP +P Y T A Y + Y R+ + L +
Sbjct: 121 GKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGADPVSN 180
Query: 143 AFSDENPNACSVM 155
F+D++ NACS+M
Sbjct: 181 LFNDDDVNACSIM 193
>Os01g0758000 Heavy metal transport/detoxification protein domain containing
protein
Length = 158
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 32/157 (20%)
Query: 29 VEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRVAYKTGKR 88
VEM V +DC GCE+KI+KA++ M+GV VE+ ++ KVTV G V+ KV++ V +TG+R
Sbjct: 4 VEMSVHMDCAGCEKKIRKAIQRMEGVDDVEIDMERQKVTVNGNVEQKKVLKAVR-RTGRR 62
Query: 89 VEPWPYVPYDTVA----------------HPYAPGAYDKKAPA--------------GYV 118
WP+ PY H Y PGA + A GY
Sbjct: 63 AVLWPH-PYTGGGVVAGGTVHVLAQQQNYHQYHPGAGVQAHAAHAARPTSSYNYYKHGYD 121
Query: 119 RNVVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM 155
+ + A ++ R T FSDENP +CSVM
Sbjct: 122 DSRLYGGYYHHGANSAVVGTRATDYFSDENPQSCSVM 158
>Os10g0537400
Length = 185
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 25 QFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRVAYK 84
QTVE+KVR+ CEGCER ++ AL +++GV SVEV KV VTGYVD G+V+R V +
Sbjct: 51 SLQTVELKVRMCCEGCERVVRSALANLRGVDSVEVDVAMEKVRVTGYVDRGRVLREVR-R 109
Query: 85 TGKRVEPWP 93
+GK+ E WP
Sbjct: 110 SGKKAEFWP 118
>Os05g0150700 Heavy metal transport/detoxification protein domain containing
protein
Length = 368
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 25 QFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVTAKQNKVTVTGYVDAGKVMRRVAYK 84
++QT+ +KV I CEGC++K+KK L ++GV ++ + KV V G V +++++ K
Sbjct: 12 KYQTLALKVSIHCEGCKKKVKKVLHSIEGVYKTDIDVQHQKVVVIGNVSVDTLVKKLV-K 70
Query: 85 TGKRVEPWP 93
TGK EPWP
Sbjct: 71 TGKHAEPWP 79
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,020,414
Number of extensions: 184730
Number of successful extensions: 673
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 665
Number of HSP's successfully gapped: 10
Length of query: 155
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 63
Effective length of database: 12,232,113
Effective search space: 770623119
Effective search space used: 770623119
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 151 (62.8 bits)