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Os05g0150700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heavy metal transport/detoxification protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.13 (0.039) R2 : 0.376
β1 : -1.63 (0.142) R2dD : 0.188 R2D : 0.0533
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.09 (0.138) R2dE : 0.0915 R2E : -0.0385
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.06 (0.0854) R2dN8 : 0.306 R2N8 : 0.0886
σ : 0.723
deviance : 241.12
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C
peak time of C : --
E
wheather : radiation
threshold : 29.67
memory length : 1868
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
232.84 0.717 8.16 -1.65 0.58 -0.8 0.801 0.107 -1.08 16 20 1441 -- --
232.87 0.711 8.16 -1.65 0.58 -0.8 0.807 -- -1.08 16 20 1440 -- --
234.68 0.713 8.16 -1.65 0.58 -0.799 -- 0.158 -1.08 16 19.99 1439 -- --
234.74 0.714 8.16 -1.65 0.582 -0.787 -- -- -1.07 16 20 1439 -- --
241.26 0.723 8.14 -1.63 -- -1.07 -- 0.289 -1.05 -- 29.67 1868 -- --
257.28 0.752 8.12 -1.6 0.541 -- 0.659 -- -0.9 16.3 -- -- -- --
258.49 0.753 8.12 -1.59 0.546 -- -- -- -0.896 16.3 -- -- -- --
241.12 0.723 8.13 -1.63 -- -1.09 -- -- -1.06 -- 29.67 1868 -- --
279.92 0.779 8.12 -- 0.6 -1.13 -- -- -0.983 15.8 19.52 8503 -- --
274.54 0.774 8.11 -1.61 -- -- -- -- -0.91 -- -- -- -- --
325.06 0.843 8.08 -- 0.576 -- -- -- -0.719 16.2 -- -- -- --
294.33 0.799 8.14 -- -- -1.38 -- -- -1.16 -- 30 22082 -- --
343 0.864 8.07 -- -- -- -- -- -0.732 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 229.94 wind 1 43200 < th dose independent rect. 4 7
2 230.28 wind 1 43200 < th dose independent rect. 2 11
4 230.33 wind 1 43200 > th dose independent rect. 4 6
7 230.88 radiation 30 1440 < th dose independent rect. 10 1
11 231.45 radiation 30 1440 < th dose independent rect. 10 3
13 231.57 radiation 30 14400 < th dose independent rect. 16 17
16 231.75 radiation 30 14400 > th dose dependent rect. 16 17
17 231.79 wind 1 43200 < th dose independent rect. 5 2
18 231.79 radiation 30 14400 > th dose dependent rect. 7 2
33 231.82 radiation 30 14400 < th dose independent rect. 18 15
34 231.84 radiation 30 14400 < th dose independent rect. 4 5
36 231.85 wind 1 43200 > th dose independent rect. 2 9
40 231.87 radiation 30 14400 < th dose independent rect. 20 13
49 231.88 radiation 40 1440 < th dose dependent rect. 10 1
50 231.89 wind 1 43200 < th dose dependent rect. 2 15
55 232.14 radiation 20 1440 < th dose independent rect. 16 21
56 232.17 wind 1 43200 < th dose dependent rect. 2 12
59 232.23 wind 1 43200 < th dose dependent rect. 2 17
61 232.24 radiation 20 1440 < th dose independent rect. 14 22
101 232.40 radiation 20 1440 < th dose independent rect. 8 3
102 232.45 radiation 30 14400 < th dose independent sin 11 NA
103 232.45 radiation 40 14400 < th dose independent rect. 9 1
126 232.55 wind 3 43200 < th dose dependent rect. 5 1
131 232.60 radiation 30 14400 > th dose independent rect. 16 17
132 232.61 radiation 30 1440 < th dose independent rect. 10 5
140 232.65 radiation 30 14400 > th dose independent rect. 7 2
158 232.66 wind 1 43200 < th dose dependent rect. 4 7
160 232.68 radiation 20 1440 < th dose independent rect. 7 16
177 232.69 radiation 20 1440 < th dose independent rect. 7 12
184 232.69 radiation 20 1440 < th dose independent rect. 7 23
190 232.72 wind 1 43200 > th dose independent rect. 5 1
198 232.77 wind 1 43200 < th dose dependent rect. 4 9
228 232.82 radiation 20 1440 < th dose independent rect. 4 17
241 232.83 radiation 20 1440 < th dose independent rect. 5 14
255 232.84 radiation 20 1440 < th dose independent no NA NA
278 232.84 radiation 20 1440 < th dose independent rect. 22 23
289 232.85 radiation 40 14400 < th dose independent rect. 13 21
303 232.86 radiation 20 1440 < th dose independent sin 2 NA
359 232.93 radiation 20 14400 < th dose independent rect. 15 1
362 232.93 radiation 40 14400 < th dose independent rect. 15 23
369 232.96 radiation 20 1440 < th dose independent rect. 7 6
424 233.06 radiation 30 1440 < th dose independent rect. 10 22
475 233.18 radiation 1 1440 > th dose dependent rect. 10 1
508 233.25 radiation 40 14400 < th dose independent rect. 5 12
517 233.25 radiation 40 14400 < th dose independent rect. 7 16
540 233.26 radiation 40 14400 < th dose independent no NA NA
548 233.26 radiation 30 1440 < th dose independent rect. 10 11
634 233.27 radiation 30 1440 < th dose independent rect. 10 9
650 233.27 radiation 30 1440 < th dose independent rect. 10 20
665 233.29 radiation 30 14400 > th dose dependent sin 11 NA
699 233.36 radiation 40 14400 < th dose independent rect. 9 23
702 233.37 wind 1 43200 < th dose dependent rect. 4 3
756 233.41 radiation 40 14400 < th dose dependent rect. 16 17
969 233.56 radiation 20 14400 < th dose independent rect. 15 6
987 233.57 radiation 20 14400 < th dose independent rect. 15 4