Os01g0507700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os01g0507700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.2 | 0.346 | 13.2 | -0.777 | 0.835 | -2.05 | -0.0627 | -3.74 | 0.328 | 7.3 | 0.2535 | 1419 | -- | -- |
| 58.78 | 0.357 | 13.2 | -0.935 | 0.789 | -1 | -0.136 | -- | 0.352 | 6.99 | 1.389 | 1421 | -- | -- |
| 54.06 | 0.342 | 13.2 | -0.761 | 0.865 | -2.08 | -- | -3.88 | 0.328 | 7.45 | 0.2407 | 1409 | -- | -- |
| 58.07 | 0.355 | 13.2 | -1.02 | 0.807 | -1.12 | -- | -- | 0.26 | 6.86 | 1.075 | 1428 | -- | -- |
| 87.48 | 0.436 | 13.2 | -0.767 | -- | -2.11 | -- | -3.77 | 0.358 | -- | 0.2284 | 1450 | -- | -- |
| 72.62 | 0.4 | 13.2 | -0.808 | 0.801 | -- | -0.0438 | -- | 0.409 | 6.76 | -- | -- | -- | -- |
| 72.63 | 0.399 | 13.2 | -0.809 | 0.801 | -- | -- | -- | 0.409 | 6.74 | -- | -- | -- | -- |
| 89.67 | 0.441 | 13.3 | -1.07 | -- | -1.25 | -- | -- | 0.257 | -- | 1.24 | 1463 | -- | -- |
| 84.33 | 0.428 | 13.2 | -- | 0.762 | -0.651 | -- | -- | 0.404 | 6.85 | 2.454 | 1434 | -- | -- |
| 106.19 | 0.482 | 13.2 | -0.79 | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
| 89.86 | 0.443 | 13.2 | -- | 0.792 | -- | -- | -- | 0.5 | 6.8 | -- | -- | -- | -- |
| 115.45 | 0.5 | 13.2 | -- | -- | -0.748 | -- | -- | 0.424 | -- | 2.47 | 1472 | -- | -- |
| 122.66 | 0.517 | 13.2 | -- | -- | -- | -- | -- | 0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 2 | 54.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 56 | 54.52 | radiation | 1 | 1440 | < th | dose dependent | sin | 17 | NA |
| 92 | 55.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 93 | 55.37 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 94 | 55.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 99 | 55.47 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 100 | 55.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 101 | 55.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 128 | 55.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 183 | 55.71 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 205 | 55.81 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 233 | 55.98 | radiation | 1 | 1440 | < th | dose independent | sin | 17 | NA |
| 237 | 56.00 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 247 | 56.01 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 295 | 56.13 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |
| 389 | 56.32 | humidity | 90 | 43200 | > th | dose independent | sin | 15 | NA |
| 426 | 56.37 | humidity | 70 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 479 | 56.46 | radiation | 1 | 1440 | > th | dose independent | sin | 18 | NA |
| 494 | 56.48 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 524 | 56.53 | radiation | 1 | 1440 | < th | dose dependent | rect. | 1 | 18 |
| 580 | 56.57 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 620 | 56.59 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 643 | 56.61 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 679 | 56.66 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 692 | 56.67 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 785 | 56.76 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 821 | 56.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 838 | 56.83 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 856 | 56.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 865 | 56.87 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 895 | 56.88 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 908 | 56.89 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 954 | 56.95 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 960 | 56.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 4 |