BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0507700 Os01g0507700|AK060145
(151 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0507700 Heavy metal transport/detoxification protein d... 278 1e-75
Os04g0244800 Heavy metal transport/detoxification protein d... 144 2e-35
Os03g0383900 Heavy metal transport/detoxification protein d... 123 6e-29
Os03g0156600 Similar to Farnesylated protein (ATFP6) 120 3e-28
Os08g0403300 Heavy metal transport/detoxification protein d... 114 3e-26
Os03g0120400 Heavy metal transport/detoxification protein d... 82 2e-16
Os09g0364800 Heavy metal transport/detoxification protein d... 74 4e-14
Os10g0537400 73 9e-14
Os01g0758000 Heavy metal transport/detoxification protein d... 64 5e-11
>Os01g0507700 Heavy metal transport/detoxification protein domain containing
protein
Length = 151
Score = 278 bits (711), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/151 (91%), Positives = 138/151 (91%)
Query: 1 MGVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVA 60
MGVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVA
Sbjct: 1 MGVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVA 60
Query: 61 VNPKQSRCTVTGYVEASKVLERVKSTGKAAEMWXXXXXXXXXXXXXGGAYDKKAPAGFVR 120
VNPKQSRCTVTGYVEASKVLERVKSTGKAAEMW GGAYDKKAPAGFVR
Sbjct: 61 VNPKQSRCTVTGYVEASKVLERVKSTGKAAEMWPYVPYTMTTYPYVGGAYDKKAPAGFVR 120
Query: 121 GNPAAMADPSAPEVRYMTMFSDENVDSCSIM 151
GNPAAMADPSAPEVRYMTMFSDENVDSCSIM
Sbjct: 121 GNPAAMADPSAPEVRYMTMFSDENVDSCSIM 151
>Os04g0244800 Heavy metal transport/detoxification protein domain containing
protein
Length = 155
Score = 144 bits (364), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 105/157 (66%), Gaps = 8/157 (5%)
Query: 1 MGVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVA 60
MG++D +S+ CS+ T+ LK RK+ QTV +KV++DCEGCER++K A++ M+GV+SV
Sbjct: 1 MGIVDVVSEFCSVPRTRRHLKKRKQ--FQTVEMKVRIDCEGCERKIKKALEDMKGVSSVE 58
Query: 61 VNPKQSRCTVTGYVEASKVLERVK-STGKAAEMWXXXXXXXXXXXXXGGAYDKKAPAGFV 119
V KQ++ TVTGYV+A KV+ RV TGK E W GAYDKKAPAG+V
Sbjct: 59 VTAKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYV 118
Query: 120 RG---NPAA--MADPSAPEVRYMTMFSDENVDSCSIM 151
R +P+A +A S+ EVRY FSDEN ++CS+M
Sbjct: 119 RNVVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM 155
>Os03g0383900 Heavy metal transport/detoxification protein domain containing
protein
Length = 157
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
Query: 2 GVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAV 61
G L+ L+ + S + K K+R LQTV +KV+MDC+GCE +VKNA+ +++GV SV +
Sbjct: 3 GSLEYLAGLFSCGDHHHGHKNSKRRQLQTVELKVRMDCDGCELKVKNALSTLKGVESVKI 62
Query: 62 NPKQSRCTVTGYVEASKVLERVKSTGKAAEMW-XXXXXXXXXXXXXGGAYDKKAPAGFVR 120
N KQ + TV+GYVEASKVL + +STGK +E+W AYD++AP G VR
Sbjct: 63 NRKQQKVTVSGYVEASKVLRKAQSTGKKSELWPYVPYSAASQPYVAAAAYDRRAPPGHVR 122
Query: 121 G----NPAAMADPSAPEVRYMTMFSDENVDSCSIM 151
+ A ++ E R +F+DE+ ++CS+M
Sbjct: 123 NVEASSAAYVSGGGRTEERLTNLFNDEDPNACSLM 157
>Os03g0156600 Similar to Farnesylated protein (ATFP6)
Length = 155
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 18/162 (11%)
Query: 1 MGVLDSLSDMCSLTETKEALKLRKKRP--LQTVNIKVKMDCEGCERRVKNAVKSMRGVTS 58
MGV D ++++ L A L KK+P Q V +KV+MDCEGCER+V+ AV+ M+GV+S
Sbjct: 1 MGVDDIIAELRVLP----AKILLKKKPKQFQKVEVKVRMDCEGCERKVRKAVEEMKGVSS 56
Query: 59 VAVNPKQSRCTVTGYVEASKVLERV-KSTGKAAEMWXXXXXXXXXXXXXGGAYDKKAPAG 117
V V+ KQ++ TVTGYVE +V+ R+ + GK AE W GAYDKKAP G
Sbjct: 57 VEVDAKQNKVTVTGYVEQEEVVGRLRRRAGKKAEPWPYVPYDVVPHPYAPGAYDKKAPPG 116
Query: 118 FVRGNPAAMADPSA--------PEVRYMTMFSDENVDSCSIM 151
+VR A+ADP A E + + FSDEN +SC++M
Sbjct: 117 YVRN---ALADPDAAPLARATEEEEKLASAFSDENPNSCAVM 155
>Os08g0403300 Heavy metal transport/detoxification protein domain containing
protein
Length = 150
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 2 GVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAV 61
G L LSD+ L + +KKR TV +KV+MDC+GCE +V+N + +M+GV SV +
Sbjct: 3 GTLHYLSDLL-LGGSSGKTSHKKKRQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVEI 61
Query: 62 NPKQSRCTVTGYVEASKVLERVKSTGKAAEMWXXXXXXXXXXXXXGGAYDKKAPAGFVRG 121
N KQ + TV G V+ +VL R +STGK E+W AYDKKAP G +R
Sbjct: 62 NRKQQKVTVQGMVDTQRVLRRAQSTGKRTELWPYVPYTNPYVAPP-AAYDKKAPNGHIRR 120
Query: 122 NPAAMADPSAPEVRYMTMFSDENVDSCSIM 151
A + + E R T+FSD+N ++C++M
Sbjct: 121 VDAVLPVTPSQEERLATLFSDDNPNACAVM 150
>Os03g0120400 Heavy metal transport/detoxification protein domain containing
protein
Length = 193
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 21 KLRKKRPL--QTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAVNPKQSRCTVTGYVEASK 78
++ + RPL QTV +KV+M C GCER VK+A+ +RGV SV V + + TVTGYVE +
Sbjct: 53 RMGRSRPLSLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQR 112
Query: 79 VLERVKSTGKAAEMWXXXXXXXXXXXXXGGAYDKKA--PA------GFVRGNPAAMADPS 130
VL+ V+ GK AE W +D+++ P+ G+ + +P
Sbjct: 113 VLKEVRRAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPH 172
Query: 131 APEVRYMTMFSDENVDSCSIM 151
+F+D++V++CSIM
Sbjct: 173 RGADPVSNLFNDDDVNACSIM 193
>Os09g0364800 Heavy metal transport/detoxification protein domain containing
protein
Length = 112
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 67 RCTVTGYVEASKVLERVKSTGKAAEMWXXXXXXXXXXXXXGGAYDKKAPAGFVRGNPAAM 126
+ TV G+VE KV++RV++TGK AE+W AYDK+AP G VR A M
Sbjct: 20 KVTVQGFVEPHKVVKRVQATGKKAEIWPYVPYTLVAHPYAAPAYDKRAPPGHVRRVDAVM 79
Query: 127 ADPS--------APEVRYMTMFSDENVDSCSIM 151
S APE R TMFSDEN ++CSIM
Sbjct: 80 PVASYGSAAAAAAPEERLTTMFSDENPNACSIM 112
>Os10g0537400
Length = 185
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 28 LQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAVNPKQSRCTVTGYVEASKVLERVKSTG 87
LQTV +KV+M CEGCER V++A+ ++RGV SV V+ + VTGYV+ +VL V+ +G
Sbjct: 52 LQTVELKVRMCCEGCERVVRSALANLRGVDSVEVDVAMEKVRVTGYVDRGRVLREVRRSG 111
Query: 88 KAAEMW 93
K AE W
Sbjct: 112 KKAEFW 117
>Os01g0758000 Heavy metal transport/detoxification protein domain containing
protein
Length = 158
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 34/158 (21%)
Query: 28 LQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVAVNPKQSRCTVTGYVEASKVLERVKSTG 87
+ V + V MDC GCE++++ A++ M GV V ++ ++ + TV G VE KVL+ V+ TG
Sbjct: 1 MTIVEMSVHMDCAGCEKKIRKAIQRMEGVDDVEIDMERQKVTVNGNVEQKKVLKAVRRTG 60
Query: 88 KAAEMWXXXXXXXXXXXXXGGA-------YDKKAPAGFVRGNPAAMADPSAPEVRY---- 136
+ A +W Y + P V+ + A A P++ Y
Sbjct: 61 RRAVLWPHPYTGGGVVAGGTVHVLAQQQNYHQYHPGAGVQAHAAHAARPTSSYNYYKHGY 120
Query: 137 -----------------------MTMFSDENVDSCSIM 151
FSDEN SCS+M
Sbjct: 121 DDSRLYGGYYHHGANSAVVGTRATDYFSDENPQSCSVM 158
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.127 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,279,420
Number of extensions: 135255
Number of successful extensions: 463
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 454
Number of HSP's successfully gapped: 9
Length of query: 151
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 59
Effective length of database: 12,232,113
Effective search space: 721694667
Effective search space used: 721694667
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 151 (62.8 bits)