Os08g0205400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os08g0205400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.48 | 0.228 | 12.9 | -0.407 | 0.232 | -0.446 | 0.103 | 0.675 | 0.00305 | 13.7 | 19.45 | 2078 | -- | -- |
| 23.49 | 0.226 | 12.9 | -0.402 | 0.201 | -0.68 | 0.0282 | -- | -0.00895 | 12.6 | 18.7 | 3415 | -- | -- |
| 23.39 | 0.225 | 12.9 | -0.432 | 0.243 | -0.486 | -- | 0.599 | -0.00911 | 13.9 | 19.48 | 2641 | -- | -- |
| 23.13 | 0.224 | 12.9 | -0.387 | 0.21 | -0.71 | -- | -- | 0.0088 | 13.9 | 18.5 | 3326 | -- | -- |
| 26.05 | 0.238 | 12.9 | -0.414 | -- | -0.651 | -- | 0.224 | -0.00778 | -- | 18.59 | 3244 | -- | -- |
| 30.32 | 0.258 | 12.8 | -0.0495 | 0.214 | -- | 0.159 | -- | 0.141 | 14 | -- | -- | -- | -- |
| 30.42 | 0.258 | 12.8 | -0.0448 | 0.214 | -- | -- | -- | 0.142 | 13.9 | -- | -- | -- | -- |
| 26.07 | 0.238 | 12.9 | -0.393 | -- | -0.728 | -- | -- | 0.0085 | -- | 18.52 | 3249 | -- | -- |
| 25.82 | 0.237 | 12.8 | -- | 0.244 | -0.496 | -- | -- | 0.0818 | 14.1 | 18.4 | 2708 | -- | -- |
| 33.19 | 0.269 | 12.8 | -0.0536 | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
| 30.47 | 0.258 | 12.8 | -- | 0.215 | -- | -- | -- | 0.147 | 13.9 | -- | -- | -- | -- |
| 29.01 | 0.251 | 12.8 | -- | -- | -0.517 | -- | -- | 0.0813 | -- | 18.1 | 3162 | -- | -- |
| 33.27 | 0.269 | 12.8 | -- | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.78 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 5 | 22.05 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 15 | 22.22 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 20 | 22.30 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 21 | 22.30 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 38 | 22.37 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 51 | 22.43 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 65 | 22.48 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 70 | 22.50 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 82 | 22.55 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 84 | 22.55 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 102 | 22.58 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 121 | 22.62 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 136 | 22.66 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 166 | 22.70 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 203 | 22.76 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 226 | 22.77 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 238 | 22.78 | wind | 9 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 240 | 22.78 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 19 | NA |
| 253 | 22.79 | wind | 9 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 255 | 22.79 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 267 | 22.80 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 268 | 22.80 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 271 | 22.81 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 19 | NA |
| 277 | 22.81 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 294 | 22.82 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 309 | 22.83 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 311 | 22.83 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 324 | 22.84 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 19 | NA |
| 332 | 22.84 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 358 | 22.86 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 364 | 22.86 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 20 |
| 370 | 22.87 | wind | 9 | 43200 | < th | dose independent | sin | 1 | NA |
| 388 | 22.87 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 402 | 22.88 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 411 | 22.88 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 20 |
| 413 | 22.88 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 17 | 9 |
| 443 | 22.89 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 450 | 22.89 | humidity | 60 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 478 | 22.90 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 479 | 22.90 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 495 | 22.91 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 535 | 22.91 | wind | 7 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 549 | 22.92 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 575 | 22.92 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 584 | 22.93 | wind | 9 | 43200 | > th | dose independent | sin | 0 | NA |
| 591 | 22.93 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 619 | 22.93 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 20 |
| 622 | 22.93 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 630 | 22.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 22 | 19 |
| 637 | 22.94 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 657 | 22.94 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 666 | 22.94 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 668 | 22.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 726 | 22.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 761 | 22.96 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 852 | 22.98 | wind | 9 | 43200 | > th | dose independent | rect. | 7 | 13 |
| 867 | 22.98 | wind | 7 | 43200 | > th | dose dependent | sin | 1 | NA |
| 869 | 22.98 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 936 | 22.99 | atmosphere | 1015 | 14400 | > th | dose dependent | no | NA | NA |
| 940 | 22.99 | humidity | 60 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 999 | 23.00 | wind | 7 | 43200 | > th | dose independent | sin | 4 | NA |