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Os02g0530100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heavy metal transport/detoxification protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0354) R2 : 0.624
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.11 (0.0884) R2dC : 0.135 R2C : 0.0633
β3 : -1.91 (0.183) R2dE : 0.1 R2E : -0.0753
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.68 (0.0763) R2dN8 : 0.554 R2N8 : 0.346
σ : 0.662
deviance : 201.73
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C
peak time of C : 14.5
E
wheather : humidity
threshold : 92.42
memory length : 718
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.5
open length of G : 8.02

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
193.14 0.653 13.9 -0.329 1.07 -1.78 0.353 -1.53 -1.74 14.4 92.04 713 17.9 7.92
195.69 0.652 13.9 -0.363 1.13 -1.92 0.555 -- -1.68 14.6 92.69 710 17.4 8.09
193.46 0.648 13.9 -0.326 1.07 -1.83 -- -1.6 -1.73 14.5 92.25 709 17.9 7.71
196.76 0.653 13.9 -0.381 1.12 -1.96 -- -- -1.68 14.6 92.73 701 17.4 8.13
215.94 0.684 13.9 -0.427 -- -1.84 -- -1.28 -1.58 -- 71.55 605 18.9 6.8
238.28 0.724 13.9 -0.568 1.31 -- 0.856 -- -1.56 15.1 -- -- -- --
240.7 0.727 13.9 -0.549 1.31 -- -- -- -1.56 15.1 -- -- -- --
220.07 0.691 13.9 -0.465 -- -1.89 -- -- -1.58 -- 71.52 601 19 6.52
201.73 0.662 13.9 -- 1.11 -1.91 -- -- -1.68 14.5 92.42 718 17.5 8.02
338.73 0.86 13.9 -0.605 -- -- -- -- -1.59 -- -- -- -- --
248.65 0.738 13.9 -- 1.32 -- -- -- -1.5 15.1 -- -- -- --
225.46 0.699 13.9 -- -- -1.96 -- -- -1.54 -- 72.54 594 19 6.56
348.39 0.871 13.9 -- -- -- -- -- -1.53 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 199.61 humidity 90 720 > th dose dependent rect. 18 8
10 200.95 humidity 90 720 > th dose dependent rect. 9 17
32 204.02 humidity 90 1440 > th dose dependent rect. 23 1
35 204.42 humidity 80 1440 < th dose dependent rect. 20 1
38 204.66 humidity 80 1440 < th dose dependent rect. 20 3
61 206.18 humidity 90 720 > th dose dependent sin 17 NA
70 206.43 atmosphere 1005 4320 < th dose independent rect. 17 1
78 206.70 humidity 50 720 > th dose dependent rect. 20 7
85 206.86 atmosphere 1005 4320 > th dose independent rect. 17 1
94 207.07 wind 5 1440 < th dose independent rect. 17 2
97 207.12 humidity 70 1440 > th dose dependent rect. 12 18
101 207.20 humidity 70 720 > th dose dependent rect. 19 7
107 207.32 humidity 70 1440 > th dose dependent rect. 15 15
115 207.55 wind 5 1440 > th dose independent rect. 18 1
117 207.57 humidity 60 1440 > th dose dependent rect. 19 9
130 207.74 humidity 70 1440 > th dose dependent sin 14 NA
134 207.75 wind 5 1440 < th dose independent rect. 16 4
156 208.05 atmosphere 1000 4320 > th dose dependent rect. 13 1
161 208.10 atmosphere 1015 4320 < th dose dependent rect. 13 1
163 208.11 wind 5 1440 > th dose independent rect. 16 4
173 208.33 wind 3 1440 > th dose dependent rect. 17 2
183 208.41 humidity 90 720 < th dose dependent rect. 19 6
256 208.96 humidity 90 1440 > th dose independent rect. 23 1
277 209.15 humidity 90 1440 > th dose independent rect. 12 14
278 209.15 humidity 90 1440 > th dose independent rect. 10 16
297 209.20 humidity 90 1440 > th dose independent rect. 18 8
391 209.63 humidity 80 720 < th dose independent rect. 19 5
524 210.09 temperature 20 270 > th dose independent rect. 14 12
600 210.26 humidity 90 1440 > th dose independent sin 16 NA
612 210.30 humidity 70 1440 > th dose dependent rect. 20 1
673 210.44 atmosphere 995 4320 > th dose dependent sin 1 NA
691 210.47 atmosphere 1015 4320 < th dose dependent sin 1 NA
736 210.58 humidity 90 1440 < th dose independent rect. 23 1
844 210.81 humidity 90 1440 < th dose independent rect. 10 18
861 210.84 humidity 80 14400 > th dose independent rect. 21 1