Os12g0144600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os12g0144600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.34 | 0.522 | 3.94 | 0.49 | 0.365 | 0.935 | 1.35 | 0.87 | -0.0881 | 7.34 | 998.9 | 2965 | -- | -- |
| 123.6 | 0.518 | 3.94 | 0.466 | 0.369 | 0.868 | 1.38 | -- | -0.0843 | 7.3 | 999.2 | 2905 | -- | -- |
| 128.24 | 0.527 | 3.95 | 0.525 | 0.366 | 0.967 | -- | 1.06 | -0.0929 | 7.18 | 998.7 | 2963 | -- | -- |
| 128.57 | 0.528 | 3.95 | 0.504 | 0.369 | 0.844 | -- | -- | -0.0888 | 7.14 | 999.2 | 2899 | -- | -- |
| 135.35 | 0.542 | 3.95 | 0.537 | -- | 1.04 | -- | 1.2 | -0.0872 | -- | 998.5 | 2954 | -- | -- |
| 130.63 | 0.536 | 3.95 | 0.513 | 0.37 | -- | 1.34 | -- | -0.13 | 7.32 | -- | -- | -- | -- |
| 135.46 | 0.545 | 3.96 | 0.542 | 0.373 | -- | -- | -- | -0.133 | 7.24 | -- | -- | -- | -- |
| 135.74 | 0.543 | 3.96 | 0.513 | -- | 0.884 | -- | -- | -0.0848 | -- | 999 | 2801 | -- | -- |
| 134.97 | 0.541 | 3.96 | -- | 0.376 | 0.756 | -- | -- | -0.142 | 7.07 | 1000 | 2866 | -- | -- |
| 142.83 | 0.558 | 3.96 | 0.548 | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
| 143.19 | 0.56 | 3.97 | -- | 0.378 | -- | -- | -- | -0.193 | 7.15 | -- | -- | -- | -- |
| 142.41 | 0.556 | 3.97 | -- | -- | 0.807 | -- | -- | -0.134 | -- | 999.9 | 2781 | -- | -- |
| 150.76 | 0.573 | 3.98 | -- | -- | -- | -- | -- | -0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.17 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 2 | 122.17 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 3 | 122.58 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 4 | 122.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 6 | 122.68 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 4 |
| 12 | 122.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 6 |
| 14 | 122.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 14 |
| 18 | 123.22 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 21 | 123.27 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 23 | 123.29 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 32 | 123.49 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 47 | 123.67 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 74 | 123.93 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 10 |
| 76 | 123.94 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 77 | 123.94 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 87 | 123.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 97 | 124.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 98 | 124.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 116 | 124.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 118 | 124.18 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 123 | 124.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 124 | 124.22 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 131 | 124.24 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 5 |
| 144 | 124.27 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 145 | 124.27 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 163 | 124.32 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 6 |
| 177 | 124.35 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 202 | 124.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 203 | 124.40 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 215 | 124.42 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 235 | 124.46 | temperature | 20.0 | 720 | > th | dose independent | sin | 9 | NA |
| 250 | 124.48 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 261 | 124.49 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 272 | 124.51 | atmosphere | 1000.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 283 | 124.52 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 300 | 124.53 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 314 | 124.55 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 329 | 124.57 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 375 | 124.63 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 392 | 124.65 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 407 | 124.66 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 411 | 124.66 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 426 | 124.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 434 | 124.69 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 446 | 124.70 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 464 | 124.72 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 472 | 124.73 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 528 | 124.78 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 530 | 124.78 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 541 | 124.79 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 547 | 124.79 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 620 | 124.86 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 633 | 124.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 692 | 124.92 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 707 | 124.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 726 | 124.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 19 |
| 730 | 124.94 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 747 | 124.95 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 753 | 124.95 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 13 |
| 780 | 124.97 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 6 | 10 |
| 794 | 124.98 | temperature | 25.0 | 10 | > th | dose independent | rect. | 23 | 12 |
| 829 | 125.00 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 833 | 125.00 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 849 | 125.01 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 939 | 125.06 | atmosphere | 1000.0 | 4320 | < th | dose dependent | no | NA | NA |
| 955 | 125.07 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 975 | 125.08 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 5 | NA |