BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0760500 Os02g0760500|AK062958
(162 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0760500 Similar to ER6 protein (Fragment) 301 1e-82
Os01g0511100 Universal stress protein (Usp) family protein 95 3e-20
Os07g0673400 Universal stress protein (Usp) family protein 85 2e-17
Os03g0305400 Universal stress protein (Usp) family protein 84 6e-17
Os10g0318900 Similar to ER6 protein (Fragment) 80 6e-16
Os10g0437500 Universal stress protein (Usp) family protein 80 8e-16
Os01g0303800 Universal stress protein (Usp) family protein 79 2e-15
AK103732 79 2e-15
Os05g0157200 Universal stress protein (Usp) family protein 75 1e-14
Os12g0552500 Universal stress protein (Usp) family protein 69 1e-12
Os02g0773200 Universal stress protein (Usp) family protein 69 1e-12
Os03g0750000 Universal stress protein (Usp) family protein 67 5e-12
>Os02g0760500 Similar to ER6 protein (Fragment)
Length = 162
Score = 301 bits (772), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/162 (92%), Positives = 150/162 (92%)
Query: 1 MATGNLASVVVAVDGSEESMNALRWALDNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPF 60
MATGNLASVVVAVDGSEESMNALRWALDNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPF
Sbjct: 1 MATGNLASVVVAVDGSEESMNALRWALDNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPF 60
Query: 61 GGPSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTAN 120
GGPSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTAN
Sbjct: 61 GGPSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTAN 120
Query: 121 LKADLLVMGCRAFGPLKRMFLGSVSNYXXXXXXXXXXXXKGT 162
LKADLLVMGCRAFGPLKRMFLGSVSNY KGT
Sbjct: 121 LKADLLVMGCRAFGPLKRMFLGSVSNYCINNVVCPVVVIKGT 162
>Os01g0511100 Universal stress protein (Usp) family protein
Length = 167
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Query: 5 NLASVVVAVDGSEESMNALRWALDNLRLRPDGALVVLHVQP--PPSIAAGLNPGPIPFGG 62
L +VAVD SE S +AL WAL NL L+VL VQP P + + G P G
Sbjct: 10 KLQKAMVAVDESEFSHHALEWALRNLAPTIAPPLLVLTVQPLLPLGYVSAASFGS-PLGT 68
Query: 63 PSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTANLK 122
P V P +A++ Q++++QA+LD A +IC++ V V+T + VGDPKE IC+ K
Sbjct: 69 P--VVAPELIKAMQEQQQQLSQALLDKAKQICAQHGVAVETMIKVGDPKEMICQAAEESK 126
Query: 123 ADLLVMGCRAFGPLKRMFLGSVSNY 147
DLL++G + GP++R+FLGSVSNY
Sbjct: 127 VDLLIVGSHSRGPVQRLFLGSVSNY 151
>Os07g0673400 Universal stress protein (Usp) family protein
Length = 171
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 9 VVVAVDGSEESMNALRWALDNLRLRPDGA----LVVLHVQPPPSIAAGLNPGPIPFGGPS 64
VVV VD SE S AL W + +L G+ LV++H +P PS G GP G
Sbjct: 13 VVVGVDDSEHSNYALEWTMQHLASGMAGSGGAELVIVHAKPSPSSVVGFGAGP----GSG 68
Query: 65 EVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTANLKAD 124
EV + +EA R+ + +++ A ++C + +V+ G+P+ +C A
Sbjct: 69 EV-----VRYVEADLRKTAEDVVEKARRLCIANAMHALIEVIEGEPRYVLCNAVEKHSAG 123
Query: 125 LLVMGCRAFGPLKRMFLGSVSNY 147
LLV+G +G +KR FLGSVS+Y
Sbjct: 124 LLVVGSHGYGAIKRAFLGSVSDY 146
>Os03g0305400 Universal stress protein (Usp) family protein
Length = 180
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 32/167 (19%)
Query: 2 ATGNLASVVVAVDGSEESMNALRWALDNLRLRPD-------GALVVLHVQPPPSIAAGLN 54
ATG ++VAVD +ES++AL+W L + R +++L+V+PPP + L+
Sbjct: 11 ATGR--RILVAVDEGDESVHALKWCLASFAKRGGGGGAAPPDTIILLYVRPPPPTYSVLD 68
Query: 55 PGPIPFGGPSEVEVPAFTQAIEAHQRRITQAILDHALKICS--------------EKNVE 100
F EV A AI+ + + + +A+++ A K+C+ E VE
Sbjct: 69 ASGYVFSD----EVAA---AIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVE 121
Query: 101 VKTDVVVGDPKEKICEVTANLKADLLVMGCRAFGPLKRMFLGSVSNY 147
VK V VGD + IC++ L AD+LVMG +G KR LGSVS+Y
Sbjct: 122 VK--VAVGDARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDY 166
>Os10g0318900 Similar to ER6 protein (Fragment)
Length = 209
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/38 (97%), Positives = 38/38 (100%)
Query: 28 DNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPFGGPSE 65
DNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPFGGPS+
Sbjct: 100 DNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPFGGPSK 137
>Os10g0437500 Universal stress protein (Usp) family protein
Length = 181
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 9 VVVAVDGSEESMNALRWALDNLRL---------------RPDGALVVLH-VQPPPSIAAG 52
V+VAVD S S AL W LD+L RP LV++H ++P +
Sbjct: 3 VLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMFP 62
Query: 53 LNPGPIPFGGPSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKE 112
+ PG +G S +E A+ A Q + +L A IC + V T V G+P+E
Sbjct: 63 VGPGSAVYGAASMME------AVRAAQAENARNLLVRARLICERRGVAAATVAVEGEPRE 116
Query: 113 KICEVTANLKADLLVMGCRAFGPLKRMFLGSVSNY 147
+C + A LLV+G R G LKR FLGSVS+Y
Sbjct: 117 ALCRAAEDAGAGLLVVGSRGLGALKRAFLGSVSDY 151
>Os01g0303800 Universal stress protein (Usp) family protein
Length = 182
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 9 VVVAVDGSEESMNALRWALDNLRLRPDG-ALVVLHVQPPPSIAAGLNPGPIPFGGPSEVE 67
+VVAVD SEES +AL W L N+ G LV+LH + P + A ++ + S+V
Sbjct: 33 IVVAVDESEESTHALTWCLANVVSSSGGDTLVLLHARRPRPVYAAMDSSG--YMMTSDV- 89
Query: 68 VPAFTQAIEAHQRRITQAILDHALKICSE-KNVEVKTDVVVGDPKEKICEVTANLKADLL 126
+++ + ++ A + A IC+ +V V+T V GDP++ IC+ T + ADLL
Sbjct: 90 ----MASMDKYAAAVSAAAVGKAKHICAAFPHVTVETMVESGDPRDVICDATEKMAADLL 145
Query: 127 VMGCRAFGPLKRMFLGSVSNY 147
VMG +G ++R FLGSVSN+
Sbjct: 146 VMGTHGYGLIQRAFLGSVSNH 166
>AK103732
Length = 182
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 9 VVVAVDGSEESMNALRWALDNLRLRPDG-ALVVLHVQPPPSIAAGLNPGPIPFGGPSEVE 67
+VVAVD SEES +AL W L N+ G LV+LH + P + A ++ + S+V
Sbjct: 33 IVVAVDESEESTHALTWCLANVVSSSGGDTLVLLHARRPRPVYAAMDSSG--YMMTSDV- 89
Query: 68 VPAFTQAIEAHQRRITQAILDHALKICSE-KNVEVKTDVVVGDPKEKICEVTANLKADLL 126
+++ + ++ A + A IC+ +V V+T V GDP++ IC+ T + ADLL
Sbjct: 90 ----MASMDKYAAAVSAAAVGKAKHICAAFPHVTVETMVESGDPRDVICDATEKMAADLL 145
Query: 127 VMGCRAFGPLKRMFLGSVSNY 147
VMG +G ++R FLGSVSN+
Sbjct: 146 VMGTHGYGLIQRAFLGSVSNH 166
>Os05g0157200 Universal stress protein (Usp) family protein
Length = 167
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 12 AVDGSEESMNALRWALDNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPFGGP----SEVE 67
AVD SE S ALRWA DNL LR L++LHV P G G P S+
Sbjct: 15 AVDFSEGSRAALRWAADNL-LRAGDHLILLHVLKDPDYEQGETLLWEATGSPLIPLSDFS 73
Query: 68 VPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTANLKADLLV 127
P + A T LD + +K V V V+ GDP+EK+C+ + LV
Sbjct: 74 EPTIAKKYGAKPDAET---LDMLNTVARQKEVVVVFKVLWGDPREKLCQAINEIPMSCLV 130
Query: 128 MGCRAFGPLKRMFLGSVSNY 147
+G R G LKR+ LGSVS+Y
Sbjct: 131 IGSRGLGKLKRVLLGSVSDY 150
>Os12g0552500 Universal stress protein (Usp) family protein
Length = 169
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 8 SVVVAVDGSEESMNALRWALDNLRLR-----PDGALVVLHVQPPPSIAAGLNPGPIPFGG 62
++VV VD SE S AL+W L + P LVV++ +P + A GL G
Sbjct: 17 TMVVGVDESEHSYYALQWTLRHFFAAAAGQPPQYRLVVVNAKPTAASAVGL-------AG 69
Query: 63 PSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTANLK 122
P +V F +EA ++ + +++ A ++C++ + + +V+ GD + +CE +
Sbjct: 70 PGAADVLPF---VEADLKKSSMRVIEKARELCAQVS-DALFEVLEGDARNVLCESVERHQ 125
Query: 123 ADLLVMGCRAFGPLKRMFLGSVSNY 147
A++LV+G +G +KR LGSVS+Y
Sbjct: 126 AEMLVVGSHGYGAIKRAVLGSVSDY 150
>Os02g0773200 Universal stress protein (Usp) family protein
Length = 165
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 8 SVVVAVDGSEESMNALRWALDNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPFGGPSEVE 67
++ + +D S S A +WA+DNL ++ ++++HV P + A+ + G +
Sbjct: 7 TIGLGMDYSPSSKAAAKWAVDNL-VKAGDRIILVHVLPKGADAS--HKELWKSTGSPLIP 63
Query: 68 VPAFTQAIEAHQRRIT--QAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTANLKADL 125
+ F + + I + +L+ K VEV V GD +EK+CE +LK +
Sbjct: 64 LLEFMEMNVQARYGINPDKEVLEILQAESKSKQVEVLAKVYWGDAREKLCEAVDDLKVNT 123
Query: 126 LVMGCRAFGPLKRMFLGSVSNY 147
V+GCR GPLKR LGSVSNY
Sbjct: 124 FVLGCRGLGPLKRALLGSVSNY 145
>Os03g0750000 Universal stress protein (Usp) family protein
Length = 128
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 79 QRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTANLKADLLVMGCRAFGPLKR 138
Q I++ ++ AL +C ++ V +V GD KE IC+ + AD+LV+G R G +KR
Sbjct: 40 QEEISRKVVSRALDVCKQREVSATGAIVEGDAKEAICQAVEEMHADMLVLGSRGLGKIKR 99
Query: 139 MFLGSVSNY 147
FLGSVS+Y
Sbjct: 100 AFLGSVSDY 108
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,586,669
Number of extensions: 247447
Number of successful extensions: 883
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 877
Number of HSP's successfully gapped: 13
Length of query: 162
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 69
Effective length of database: 12,179,899
Effective search space: 840413031
Effective search space used: 840413031
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)