Os03g0305400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Universal stress protein (Usp) family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0305400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Universal stress protein (Usp) family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 658.52 | 1.21 | 5.05 | -0.784 | 0.806 | 4.36 | 3.95 | 0.518 | -0.282 | 17.3 | 29.64 | 708 | 17 | 3.02 |
| 658.32 | 1.19 | 5.05 | -0.693 | 0.782 | 4.31 | 3.75 | -- | -0.29 | 17.8 | 29.59 | 706 | 17 | 3.03 |
| 692.69 | 1.23 | 5.03 | -0.826 | 0.842 | 4.34 | -- | -0.141 | -0.314 | 17.6 | 29.6 | 712 | 17 | 3 |
| 687.19 | 1.22 | 5.1 | -0.744 | 0.964 | 4.12 | -- | -- | -0.338 | 19.1 | 29.4 | 728 | 17 | 3.01 |
| 716.9 | 1.25 | 5.02 | -0.736 | -- | 4.23 | -- | -0.11 | -0.244 | -- | 29.5 | 698 | 17 | 2.83 |
| 967.62 | 1.46 | 5.05 | -1.25 | 4.49 | -- | -1.01 | -- | -0.00322 | 23.7 | -- | -- | -- | -- |
| 971.96 | 1.46 | 5.05 | -1.21 | 4.49 | -- | -- | -- | 0.00211 | 23.7 | -- | -- | -- | -- |
| 715.22 | 1.25 | 5.01 | -0.709 | -- | 4.24 | -- | -- | -0.239 | -- | 29.56 | 699 | 16.9 | 2.92 |
| 702.46 | 1.23 | 5.09 | -- | 1.04 | 4.14 | -- | -- | -0.318 | 18.9 | 29.4 | 730 | 17 | 3.03 |
| 2242.25 | 2.21 | 4.95 | -1.08 | -- | -- | -- | -- | 0.0554 | -- | -- | -- | -- | -- |
| 1010.64 | 1.49 | 5.02 | -- | 4.48 | -- | -- | -- | 0.137 | 23.6 | -- | -- | -- | -- |
| 727.97 | 1.26 | 5.02 | -- | -- | 4.27 | -- | -- | -0.221 | -- | 29.58 | 707 | 16.7 | 3.11 |
| 2273.24 | 2.23 | 4.92 | -- | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 664.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 2 | 669.06 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 6 | 675.50 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 9 | 681.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 12 |
| 12 | 685.16 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 15 | 686.98 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 22 | 689.68 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 38 | 699.94 | radiation | 10.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 62 | 711.02 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 67 | 711.69 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 73 | 713.26 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 83 | 718.06 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 108 | 724.08 | radiation | 10.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 115 | 725.25 | humidity | 70.0 | 720 | > th | dose independent | sin | 15 | NA |
| 137 | 727.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 19 |
| 160 | 730.03 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 22 |
| 194 | 734.53 | radiation | 1.0 | 720 | < th | dose independent | rect. | 22 | 22 |
| 202 | 735.55 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 211 | 736.57 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 19 |
| 214 | 737.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 23 |
| 215 | 737.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 229 | 738.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 245 | 740.36 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 260 | 741.13 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 18 |
| 277 | 742.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 326 | 744.32 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 336 | 744.68 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 341 | 744.77 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 456 | 747.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 566 | 749.18 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 569 | 749.18 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 590 | 750.02 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 688 | 752.53 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 10 |
| 729 | 754.04 | radiation | 1.0 | 720 | < th | dose independent | sin | 14 | NA |
| 744 | 754.45 | radiation | 1.0 | 90 | < th | dose dependent | sin | 20 | NA |
| 749 | 754.57 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 12 |
| 766 | 754.95 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 798 | 755.91 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 822 | 756.62 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 14 |
| 823 | 756.71 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 12 |
| 888 | 758.04 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 909 | 758.37 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 920 | 758.60 | radiation | 1.0 | 90 | < th | dose independent | sin | 17 | NA |
| 926 | 758.78 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 931 | 758.87 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 936 | 758.93 | temperature | 25.0 | 90 | < th | dose independent | rect. | 19 | 2 |