BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0305400 Os03g0305400|AK071397
(180 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163 139 1e-33
AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163 95 2e-20
AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172 91 3e-19
AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161 89 2e-18
AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227 87 6e-18
AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205 84 6e-17
AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243 69 1e-12
AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176 65 1e-11
AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176 64 3e-11
AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164 59 1e-09
AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161 59 2e-09
AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194 53 7e-08
AT4G27320.1 | chr4:13678860-13680717 REVERSE LENGTH=261 49 2e-06
>AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163
Length = 162
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 18/173 (10%)
Query: 7 EETAATGRRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSV 66
EET R+I+VAVDE +ES+ AL W L + +T+ILLYV+PP P YS
Sbjct: 2 EETKE--RKIVVAVDESEESMEALSWSLDNL------FPYGSNNTLILLYVKPPLPVYSS 53
Query: 67 LDASGYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVAV 126
LDA+G++ + + AA+ Y E+ E+V+ +++ + Y ++ +E +V
Sbjct: 54 LDAAGFIVTGDPVAALKKYEYELVESVMARSRTVYQDYESDIN----------IERRVGR 103
Query: 127 GDARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
GDA+ VIC KL D+LVMG+H YG FKRALLGSVS+YC + CPV+IVK
Sbjct: 104 GDAKEVICNAVQKLRVDMLVMGTHDYGFFKRALLGSVSEYCAKRVKCPVVIVK 156
>AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163
Length = 162
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 16 ILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLDASGYVFS 75
++V VD+ ++S +AL+W L F L V P S + +G +
Sbjct: 10 MVVGVDDSEQSTYALEWTLDRFFAPYAPNY-----PFKLFIVHAKPNAVSAVGLAG-PGT 63
Query: 76 DEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVAVGDARNVICQ 135
EV +D K A VVEKA+ +C + V G ++V GDARN++C+
Sbjct: 64 AEVVPYVDADLKHTAAKVVEKAKAICQ--SRSVHG---------AVIEVFEGDARNILCE 112
Query: 136 MADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
+ DK A +LV+GSHGYG KRA+LGS SDYC +A+C V+IVK
Sbjct: 113 VVDKHHASILVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVK 156
>AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172
Length = 171
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 23/171 (13%)
Query: 16 ILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLDASGYVFS 75
++VAVD + S+ AL+W L + + ++L+V+P P + + F
Sbjct: 10 VVVAVDGSEVSMEALRWALDNL----KLSSSSSDSSFVVLHVQPSPSVAAGVSPGTIPFG 65
Query: 76 -------DEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVAVGD 128
AAI+ + K + + ++E A ++C A + V+ +V +GD
Sbjct: 66 GPSGLEVPAFTAAIEQHQKRITDTILEHASQIC------------AEKSVNVKTQVVIGD 113
Query: 129 ARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
+ IC+ + L AD+LVMGS YG KR LGSVS+YC +A+CPV+I+K
Sbjct: 114 PKYKICEAVENLHADLLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIK 164
>AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161
Length = 160
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 7 EETAATGRRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSV 66
EE + ++++VA+DE + S AL+W L D+ I+L+ P S
Sbjct: 3 EEEKSVMKQVMVAIDESECSKRALQWTLVYLKD-------SLADSDIILFTAQPHLDLSC 55
Query: 67 LDASGYVFSD-EVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVA 125
+ AS Y + E+ ++ K +++ K+C G + +
Sbjct: 56 VYASSYGAAPIELINSLQESHKNAGLNRLDEGTKICAETG------------VTPRKVLE 103
Query: 126 VGDARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVKS 180
G+ + IC+ A+KLG D+LV+GSHG G +R LGSVS+YCV NA CPVL+V++
Sbjct: 104 FGNPKEAICEAAEKLGVDMLVVGSHGKGALQRTFLGSVSNYCVNNAKCPVLVVRT 158
>AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227
Length = 226
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 46/212 (21%)
Query: 2 DRATEEETAA-TGRRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDT--IILLYVR 58
+ TE E + T +R++VA+DE D S +AL+W + F+ ++ + +++V+
Sbjct: 20 ETTTEAEAPSLTTKRMVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQ 79
Query: 59 PPPPTYSVLDA-----SGYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGE 113
P ++ A + S + ++ +E + A++ +A ++C
Sbjct: 80 SPFNHFAAFPAGPGGATAVYASSSMIESVKKAQQETSAALLSRALQMCR----------- 128
Query: 114 AGHEMKVEVKVAVGDARNVICQMADKLGADVLVMGSHGYG-------------------- 153
+++ E V G+A+ +IC+ +K+ D+LV+GS G G
Sbjct: 129 -AKQIRTETLVLEGEAKEMICEAVEKMHVDLLVVGSRGLGKIKRYCIINNFFLYINLSAY 187
Query: 154 ------LFKRALLGSVSDYCVRNANCPVLIVK 179
F RA LGSVSDYC +ANCP+LIVK
Sbjct: 188 YFVCFVRFGRAFLGSVSDYCAHHANCPILIVK 219
>AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205
Length = 204
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 16 ILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXD--TIILLYVRPPPPTY---SVLDAS 70
++VA+DE S AL+W + + + LL+V P Y S AS
Sbjct: 32 VMVAIDESKNSFDALEWAVDHLRVVISAEPETGQEGGLLTLLHVHPTYLQYIYPSGGTAS 91
Query: 71 GYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVAVGDAR 130
+D V + +E + +A ++C G +K E + GD +
Sbjct: 92 AVYATDSVPEPMRKAREESTTNLFTRALEIC------------RGKMVKTETMILEGDPK 139
Query: 131 NVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
+ICQ ++ D+LV+GS G G+ KRA LGSVSDYC ++A CP+LIV+
Sbjct: 140 EMICQAVEQTHVDLLVVGSRGLGMIKRAFLGSVSDYCAQHAKCPILIVR 188
>AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243
Length = 242
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 9 TAATGRRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLD 68
TA R+I +AVD DES +A++W + ++ + D ++LL+V+P SVL
Sbjct: 33 TAGAQRKIGIAVDLSDESAYAVQWAVQNYLR--------SGDAVVLLHVQP----TSVLY 80
Query: 69 ASGYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGD-GEAGHEMKVEVKVAVG 127
+ + D ++ D ++E + + + +V EA K+ + V
Sbjct: 81 GADWGAMD-LSPQWDPNNEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHI-VKDH 138
Query: 128 DARNVICQMADKLGADVLVMGSHGYGLFKRA---LLGSVSDYCVRNANCPVLIVK 179
D + +C ++LG L+MGS G+G KR+ LGSVSDY V + CPV++V+
Sbjct: 139 DMKERLCLEVERLGLSTLIMGSRGFGATKRSSKGRLGSVSDYSVHHCACPVVVVR 193
>AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176
Length = 175
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 29 ALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLDASGYVFSDEVAAAIDGYSKE 88
A +W L + I+LL+V+ V+D G+ D + A+ + + ++
Sbjct: 30 AFEWTLEKIVRSNTSDF-----KILLLHVQ-------VVDEDGFDDVDSIYASPEDF-RD 76
Query: 89 VAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKV--EVKVAVGDARNVICQMADKLGADVLV 146
+ ++ K L + + HE+ V E + GD ++VICQ ++ D LV
Sbjct: 77 MRQSNKAKGLHLLEFFVNKC-------HEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLV 129
Query: 147 MGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
+GS G G F++ +G+VS +CV++A CPV+ +K
Sbjct: 130 VGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIK 162
>AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176
Length = 175
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 15 RILVAVDEGD---------ESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYS 65
R++VAV+E S A +W L + ++LL+V+
Sbjct: 7 RVMVAVNESTLKGYPHASISSKKAFEWTLKKIVRSNTSGF-----KLLLLHVQ------- 54
Query: 66 VLDASGYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKV--EVK 123
V D G+ D + A+ D + +++ E K L + K+ H++ V E
Sbjct: 55 VQDEDGFDDMDSIYASPDDF-RQMRERNKAKGLHLLEFFVKKC-------HDIGVGCEAW 106
Query: 124 VAVGDARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
+ GD +IC ++ D LV+GS G G F++ +G+VS++CV++A CPV+ +K
Sbjct: 107 IRKGDPTELICHEVRRVRPDFLVVGSRGLGPFQKVFVGTVSEFCVKHAECPVITIK 162
>AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164
Length = 163
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 13 GRRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLDASGY 72
GRRI VAVD D S AL W + + + D +IL+ + + + G
Sbjct: 6 GRRIGVAVDFSDCSKKALSWAIDNVVR--------DGDHLILITI-----AHDMNYEEGE 52
Query: 73 VFSDEVAAAIDGYSKEVAEAVVEKAQKLC----TLYGKEVGGDGEAGHEMKVEVKVAVGD 128
+ E + E ++A V K L TL ++ + V +K+ GD
Sbjct: 53 MQLWETVGSPFIPMSEFSDAAVMKKYALKPDAETL---DIVNTAARKKTITVVMKIYWGD 109
Query: 129 ARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVKS 180
R IC A+++ LVMG+ G G KR ++GSVS++ V N CPV +VK+
Sbjct: 110 PREKICAAAEQIPLSSLVMGNRGLGGLKRMIMGSVSNHVVNNVACPVTVVKA 161
>AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161
Length = 160
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 14 RRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLDASGYV 73
R I +A+D + S +ALKW + + A + DTI +++ P S ++ +
Sbjct: 5 RNIGIAMDFSESSKNALKWAIENLADKG--------DTIYIIHTLPLSGDES-RNSLWFK 55
Query: 74 FSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVAVGDARNVI 133
+ + E+ E K C ++ G E+ V K+ GDAR +
Sbjct: 56 SGSPLIPLAEFREPEIMEKYGVKTDIACL----DMLDTGSRQKEVHVVTKLYWGDAREKL 111
Query: 134 CQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVK 179
L D +VMGS G +R ++GSVS + +++A CPV +VK
Sbjct: 112 VDAVKDLKLDSIVMGSRGLSALQRIIMGSVSSFVIQHAPCPVTVVK 157
>AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194
Length = 193
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 16 ILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPTYSVLDASGYVFS 75
++VAVD G S HA W L F + DT+ L++ A FS
Sbjct: 42 VIVAVDHGPNSKHAFDWALVHFCR--------LADTLHLVH------------AVSSSFS 81
Query: 76 DEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKVEVKVAVGDARNVICQ 135
+ Y E ++A++EK + + +K +V GDA VIC+
Sbjct: 82 LQCVKNDVVY--ETSQALMEK-----------LAVEAYQVAMVKSVARVVEGDAGKVICK 128
Query: 136 MADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNA-NCPVLIV 178
A+K+ +++G+ G L + L GSVS+YC N + PV+IV
Sbjct: 129 EAEKVKPAAVIVGTRGRSLVRSVLQGSVSEYCFHNCKSAPVIIV 172
>AT4G27320.1 | chr4:13678860-13680717 REVERSE LENGTH=261
Length = 260
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 4 ATEEETAATGRRILVAVDEGDESVHALKWCLASFAKRXXXXXXXXXDTIILLYVRPPPPT 63
AT TA R+I VAVD +ES A++W + + + D +++L+V P
Sbjct: 35 ATPTPTAGARRKIGVAVDLSEESAFAVRWAVDHYIR--------PGDAVVILHVSP---- 82
Query: 64 YSVLDASGYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDG----EAGHEMK 119
SVL + + + + + +V EAG K
Sbjct: 83 TSVLFGADWGPLPLQTPPPPSAATDPGAQPKPSQEDFDAFTSSKVADLAKPLKEAGFPHK 142
Query: 120 VEVKVAVGDARNVICQMADKLGADVLVMGSHGYGLFKRA---LLGSVSDY 166
+ + V D R +C ++L ++MGS G+G KR LGSVSDY
Sbjct: 143 IHI-VKDHDMRERLCLETERLNLSAVIMGSRGFGAEKRGSDGKLGSVSDY 191
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,705,913
Number of extensions: 138706
Number of successful extensions: 678
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 665
Number of HSP's successfully gapped: 14
Length of query: 180
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 88
Effective length of database: 8,584,297
Effective search space: 755418136
Effective search space used: 755418136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)