Os10g0318900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ER6 protein (Fragment).
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Os10g0318900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ER6 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.15 | 0.482 | 8.24 | -0.0117 | 1.42 | 1.31 | 0.791 | -0.898 | 0.0987 | 7.06 | 73.59 | 1196 | -- | -- |
| 105.97 | 0.479 | 8.23 | 0.0425 | 1.44 | 1.23 | 0.867 | -- | 0.0843 | 7.08 | 74.89 | 1181 | -- | -- |
| 106.68 | 0.481 | 8.24 | -0.0132 | 1.44 | 1.32 | -- | -1.04 | 0.102 | 7.08 | 72.62 | 1174 | -- | -- |
| 107.81 | 0.484 | 8.23 | 0.0709 | 1.43 | 1.22 | -- | -- | 0.0892 | 7.07 | 74.71 | 1191 | -- | -- |
| 209.93 | 0.675 | 8.27 | -0.0112 | -- | 1.24 | -- | -0.699 | 0.0961 | -- | 76.17 | 1311 | -- | -- |
| 139.3 | 0.553 | 8.26 | 0.283 | 1.42 | -- | 0.819 | -- | 0.00422 | 6.46 | -- | -- | -- | -- |
| 140.97 | 0.556 | 8.26 | 0.294 | 1.42 | -- | -- | -- | 0.00166 | 6.47 | -- | -- | -- | -- |
| 209.62 | 0.674 | 8.27 | 0.118 | -- | 1.22 | -- | -- | 0.0848 | -- | 79 | 1323 | -- | -- |
| 107.94 | 0.484 | 8.24 | -- | 1.43 | 1.24 | -- | -- | 0.0833 | 7.07 | 74.59 | 1190 | -- | -- |
| 246.53 | 0.734 | 8.28 | 0.33 | -- | -- | -- | -- | 0.0314 | -- | -- | -- | -- | -- |
| 143.25 | 0.56 | 8.26 | -- | 1.43 | -- | -- | -- | -0.0311 | 6.46 | -- | -- | -- | -- |
| 209.92 | 0.675 | 8.28 | -- | -- | 1.25 | -- | -- | 0.0738 | -- | 79 | 1323 | -- | -- |
| 249.4 | 0.737 | 8.29 | -- | -- | -- | -- | -- | -0.00517 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.61 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 17 |
| 2 | 102.62 | humidity | 70 | 720 | < th | dose independent | sin | 11 | NA |
| 3 | 102.83 | humidity | 70 | 720 | > th | dose independent | sin | 11 | NA |
| 5 | 103.89 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 7 | 104.26 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 17 |
| 11 | 104.52 | radiation | 30 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 13 | 104.61 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 15 | 105.17 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 21 | 105.43 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 23 | 105.47 | radiation | 30 | 1440 | < th | dose independent | rect. | 23 | 9 |
| 25 | 105.49 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 31 | 105.77 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 32 | 105.81 | radiation | 30 | 1440 | < th | dose independent | rect. | 20 | 12 |
| 34 | 105.85 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 57 | 106.22 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 90 | 106.61 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 103 | 107.10 | radiation | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 153 | 107.68 | humidity | 80 | 720 | < th | dose dependent | sin | 11 | NA |
| 154 | 107.72 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 183 | 108.15 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 217 | 108.62 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 240 | 108.85 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 279 | 109.25 | radiation | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 289 | 109.43 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 297 | 109.52 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 325 | 109.57 | humidity | 50 | 1440 | > th | dose independent | rect. | 2 | 15 |
| 343 | 109.61 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 4 |
| 347 | 109.63 | humidity | 50 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 371 | 109.71 | humidity | 50 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 372 | 109.72 | humidity | 50 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 379 | 109.75 | humidity | 50 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 382 | 109.78 | humidity | 50 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 433 | 110.07 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 446 | 110.10 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 471 | 110.18 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 473 | 110.19 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 541 | 110.45 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 639 | 110.75 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 682 | 110.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 685 | 110.89 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 700 | 110.93 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 742 | 111.02 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 858 | 111.28 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 861 | 111.29 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 16 |
| 865 | 111.30 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 19 |
| 907 | 111.34 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 8 |
| 930 | 111.38 | humidity | 60 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 938 | 111.40 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 969 | 111.47 | humidity | 50 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 1000 | 111.50 | humidity | 50 | 1440 | > th | dose independent | rect. | 9 | 21 |