Os02g0760500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ER6 protein (Fragment).
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Os02g0760500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ER6 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.81 | 0.234 | 12.3 | -0.53 | 0.667 | -0.216 | 0.381 | -2.97 | -0.000565 | 22.9 | 18.65 | 3789 | -- | -- |
| 30.72 | 0.258 | 12.2 | 0.209 | 0.609 | -0.327 | 0.0414 | -- | 0.105 | 23.1 | 29.63 | 3386 | -- | -- |
| 25.18 | 0.234 | 12.3 | -0.557 | 0.644 | -0.171 | -- | -2.83 | -0.00349 | 22.9 | 19.04 | 3143 | -- | -- |
| 25.13 | 0.233 | 12.2 | 0.712 | 0.654 | -0.591 | -- | -- | 0.417 | 22.8 | 30.63 | 47520 | -- | -- |
| 47.59 | 0.323 | 12.2 | 0.0173 | -- | -0.54 | -- | -1.52 | 0.195 | -- | 20.9 | 3112 | -- | -- |
| 33.94 | 0.273 | 12.2 | 0.148 | 0.64 | -- | 0.203 | -- | 0.167 | 22.8 | -- | -- | -- | -- |
| 34.11 | 0.274 | 12.2 | 0.14 | 0.639 | -- | -- | -- | 0.167 | 22.8 | -- | -- | -- | -- |
| 49.82 | 0.33 | 12.2 | 0.273 | -- | -0.63 | -- | -- | 0.271 | -- | 20.9 | 3112 | -- | -- |
| 31.85 | 0.263 | 12.2 | -- | 0.647 | -0.235 | -- | -- | 0.227 | 22.8 | 30.4 | 47520 | -- | -- |
| 59.34 | 0.36 | 12.2 | 0.153 | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
| 34.63 | 0.275 | 12.2 | -- | 0.64 | -- | -- | -- | 0.151 | 22.8 | -- | -- | -- | -- |
| 51.71 | 0.336 | 12.2 | -- | -- | -0.575 | -- | -- | 0.233 | -- | 20.9 | 3112 | -- | -- |
| 59.96 | 0.361 | 12.2 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.03 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 2 | 22.12 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 4 | 22.37 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 5 | 22.37 | temperature | 20 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 21 | 22.50 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 28 | 22.51 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 46 | 22.56 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 90 | 22.65 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 92 | 22.65 | temperature | 20 | 43200 | > th | dose dependent | sin | 11 | NA |
| 102 | 22.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 14 |
| 119 | 22.68 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 133 | 22.69 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 147 | 22.70 | temperature | 20 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 149 | 22.70 | temperature | 30 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 186 | 22.73 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 237 | 22.76 | temperature | 25 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 272 | 22.78 | temperature | 25 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 369 | 22.81 | temperature | 25 | 43200 | < th | dose independent | sin | 17 | NA |
| 373 | 22.81 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 377 | 22.81 | temperature | 20 | 43200 | > th | dose dependent | no | NA | NA |
| 401 | 22.81 | temperature | 20 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 402 | 22.81 | temperature | 20 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 412 | 22.82 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 413 | 22.82 | temperature | 25 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 438 | 22.82 | temperature | 20 | 43200 | > th | dose dependent | rect. | 1 | 22 |
| 448 | 22.82 | temperature | 20 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 457 | 22.83 | temperature | 25 | 43200 | < th | dose independent | rect. | 5 | 19 |
| 526 | 22.85 | temperature | 25 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 622 | 22.87 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 657 | 22.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 10 |
| 672 | 22.88 | temperature | 25 | 43200 | > th | dose independent | sin | 17 | NA |
| 691 | 22.88 | temperature | 20 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 713 | 22.89 | temperature | 25 | 43200 | < th | dose independent | no | NA | NA |
| 715 | 22.89 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 723 | 22.89 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 18 |
| 734 | 22.89 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 878 | 22.92 | temperature | 25 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 953 | 22.94 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 4 |