BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0200000 Os02g0200000|AK068100
(327 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0200000 Cellular retinaldehyde binding/alpha-tocophero... 681 0.0
Os09g0258000 Cellular retinaldehyde-binding/triple function... 451 e-127
Os06g0607200 Cellular retinaldehyde-binding/triple function... 138 4e-33
Os05g0545000 Similar to Phosphatidylinositol transfer-like ... 104 1e-22
Os09g0481100 Similar to Phosphatidylinositol transfer-like ... 95 5e-20
Os08g0497300 Cellular retinaldehyde binding/alpha-tocophero... 94 2e-19
Os10g0122600 Cellular retinaldehyde binding/alpha-tocophero... 92 4e-19
Os08g0341700 Similar to Phosphatidylinositol transfer-like ... 92 5e-19
Os01g0701900 Similar to Phosphatidylinositol transfer-like ... 92 7e-19
Os02g0721800 Similar to Phosphatidylinositol transfer-like ... 90 2e-18
Os02g0133200 Similar to Phosphatidylinositol transfer-like ... 85 9e-17
>Os02g0200000 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 327
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MGAASDDAVKQLALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDS 60
MGAASDDAVKQLALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDS
Sbjct: 1 MGAASDDAVKQLALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDS 60
Query: 61 LNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGYTKEGLPVFAVGVGQSTYDKASVH 120
LNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGYTKEGLPVFAVGVGQSTYDKASVH
Sbjct: 61 LNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGYTKEGLPVFAVGVGQSTYDKASVH 120
Query: 121 YYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQMKMLTSISTVDD 180
YYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQMKMLTSISTVDD
Sbjct: 121 YYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQMKMLTSISTVDD 180
Query: 181 LNYPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPH 240
LNYPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPH
Sbjct: 181 LNYPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPH 240
Query: 241 FCRREGSGSSKHSSTDADDCYSLDHPFHKELYGHIEELASCKELIKMGSLHVSIPEPDPD 300
FCRREGSGSSKHSSTDADDCYSLDHPFHKELYGHIEELASCKELIKMGSLHVSIPEPDPD
Sbjct: 241 FCRREGSGSSKHSSTDADDCYSLDHPFHKELYGHIEELASCKELIKMGSLHVSIPEPDPD 300
Query: 301 DAKIVEVIQAEFQKIGEQNGSANGHKV 327
DAKIVEVIQAEFQKIGEQNGSANGHKV
Sbjct: 301 DAKIVEVIQAEFQKIGEQNGSANGHKV 327
>Os09g0258000 Cellular retinaldehyde-binding/triple function, N-terminal domain
containing protein
Length = 335
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/323 (65%), Positives = 270/323 (83%), Gaps = 4/323 (1%)
Query: 1 MGAASDDAVKQLALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDS 60
M AAS++A+KQ + LM+ ++ PL+ TFQ+VHQGY + TL+RFLKAREWNV KAHKML+D
Sbjct: 1 MAAASEEAIKQFSALMELLDEPLKTTFQHVHQGYARGTLVRFLKAREWNVPKAHKMLMDC 60
Query: 61 LNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGYTKEGLPVFAVGVGQSTYDKASVH 120
LNWRIQN ID+VL +PIVP DLYR+IRD+ LVGL+GY+K+G PV+A GVG ST DKASVH
Sbjct: 61 LNWRIQNGIDSVLAKPIVPSDLYRTIRDTLLVGLTGYSKQGQPVYAFGVGLSTLDKASVH 120
Query: 121 YYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQMKMLTSISTVDD 180
YYVQSHIQ+NEYRDRV+LP ++ FG+ + TC+KV+DMTGLKLSAL+Q+KML++I+ +DD
Sbjct: 121 YYVQSHIQMNEYRDRVVLPKASKMFGKQINTCLKVMDMTGLKLSALNQIKMLSTITAIDD 180
Query: 181 LNYPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPH 240
LNYPEKTETY++VN PY+FSACWKVVKPLLQERTK+K+KVL+G GRDELLK+MDY +LP+
Sbjct: 181 LNYPEKTETYFIVNAPYVFSACWKVVKPLLQERTKRKIKVLYGSGRDELLKVMDYEALPN 240
Query: 241 FCRREGSGSSKHSSTDADDCYSLDHPFHKELYGHIEELASCKEL---IKMGSLHVSIPEP 297
FC+REGSGSS SS DCYS DHPFH+ELY +I++ A ++ IK GS+HV +P P
Sbjct: 241 FCKREGSGSSNDSSDGV-DCYSYDHPFHQELYNYIKQQALNEDFIGPIKQGSMHVDVPTP 299
Query: 298 DPDDAKIVEVIQAEFQKIGEQNG 320
D ++AKI+E I++E K NG
Sbjct: 300 DLEEAKIMETIESELHKFSGANG 322
>Os06g0607200 Cellular retinaldehyde-binding/triple function, C-terminal domain
containing protein
Length = 120
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 72/73 (98%)
Query: 100 EGLPVFAVGVGQSTYDKASVHYYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMT 159
+G+PVFA+GVGQSTYDKASVHYYVQSHIQINEYRDR++LPM ++KFGRP++TC+KVLDMT
Sbjct: 18 QGIPVFAIGVGQSTYDKASVHYYVQSHIQINEYRDRIVLPMASKKFGRPISTCIKVLDMT 77
Query: 160 GLKLSALSQMKML 172
GLKLSAL+QMK+L
Sbjct: 78 GLKLSALNQMKVL 90
>Os05g0545000 Similar to Phosphatidylinositol transfer-like protein IV
Length = 613
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 38 TLLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGY 97
T+LRFLKAR+++V KA M D L WR + D + E D + G
Sbjct: 106 TMLRFLKARKFDVEKAKSMWSDMLKWRKEFGADNIEEFDYTEAD---EVMKYYPQFYHGV 162
Query: 98 TKEGLPVFAVGVGQSTYDK----ASVHYYVQSHIQINEYRDRVILPMLTEKFGRPVTTCV 153
KEG P++ +G+ +K ++ YV+ H++ E ++ P + RP+ +
Sbjct: 163 DKEGRPIYIELIGKVDANKLMQVTTIERYVKYHVKEFERCFQMRFPACSIAAKRPIDSST 222
Query: 154 KVLDMTGLKLSALSQMK--MLTSISTVDDLNYPEKTETYYVVNVPYIFSACWKVVKPLLQ 211
+LD+ G+ L S+ ++T + +D+ NYPE Y++N F W VK L
Sbjct: 223 TILDVQGVGLKNFSKAARDLITRLQKIDNDNYPETLRRMYIINAGQGFKMLWSTVKSFLD 282
Query: 212 ERTKKKVKVLHGCGRDELLKIMDYSSLPHF----CRREGSGSSKHS 253
+T K+ VL +++LL+I+D + LP F C+ E G K S
Sbjct: 283 PKTASKIHVLGSKYQNKLLEIIDENELPEFFGGKCKCEAFGGCKKS 328
>Os09g0481100 Similar to Phosphatidylinositol transfer-like protein IV
Length = 611
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 7 DAVKQLALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDSLNWRIQ 66
DA ++LA+ + + + H Y +LRFLKAR+++ KA +M + L WR +
Sbjct: 66 DAEEELAVAAFRDRLAVHALLPDKHDDY--HMMLRFLKARKFDSEKAMQMWAEMLRWRKE 123
Query: 67 NEIDTVLERPIVPVDLYRSIRDSQLVGLSGYTKEGLPVFAVGVGQSTYDK----ASVHYY 122
DT+LE D + G G +EG PV+ +G+ +K SV Y
Sbjct: 124 FGADTILEE--FEFDELDDVLRYYPQGYHGVDREGRPVYIERLGKVYPNKLMQITSVDRY 181
Query: 123 VQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQM--KMLTSISTVDD 180
++ H+Q E R P T R + + +LD+ G+ L S+ +++ + +D
Sbjct: 182 IKYHVQEFERAFRERFPACTLAAKRHIDSTTTILDVHGVGLKNFSKTARELVHRMQKIDS 241
Query: 181 LNYPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPH 240
YPE YVVN F W VK L +T K+ VL + LL+++D S LP
Sbjct: 242 DYYPETLHQMYVVNAGSGFKLIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVIDKSELPE 301
Query: 241 F 241
F
Sbjct: 302 F 302
>Os08g0497300 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 604
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 39 LLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTVLERPIVPVDLYR--SIRDSQLVGLSG 96
+LRFLKAR++++ +A +M D L WR + DT+L+ D + + G G
Sbjct: 92 MLRFLKARKFDIDRAMQMWADMLKWREEFGADTILQ----DFDFHELDEVLRYYPQGYHG 147
Query: 97 YTKEGLPVFAVGVGQSTYDK----ASVHYYVQSHIQINEYRDRVILPMLTEKFGRPVTTC 152
+EG PV+ +G+ +K SV Y++ H+Q E R P T R + +
Sbjct: 148 VDREGRPVYIERLGKVDPNKLMQITSVDRYIKYHVQEFERAFRERFPACTLAAKRHIDST 207
Query: 153 VKVLDMTGLKLSALSQM--KMLTSISTVDDLNYPEKTETYYVVNVPYIFSACWKVVKPLL 210
+LD+ G+ S+ +++ + +D YPE +VVN F W VK L
Sbjct: 208 TTILDVQGVGFKNFSKTARELINRMQKIDSDYYPETLHQMFVVNAGSGFKLIWNSVKGFL 267
Query: 211 QERTKKKVKVLHGCGRDELLKIMDYSSLPHF 241
+T K+ VL + LL+++D S LP F
Sbjct: 268 DPKTSSKIHVLGSNYQSRLLEVIDSSELPDF 298
>Os10g0122600 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 598
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 22/250 (8%)
Query: 7 DAVKQLALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDSLNWRIQ 66
DA +QL +L + H Y +LRFLKAR+++V KA +M D L WR +
Sbjct: 86 DAFRQLLIL--------EELLPSQHDDY--HMMLRFLKARKFDVEKAKQMWADMLRWRKE 135
Query: 67 NEIDTVLERPIVPVDLYRSIRDSQLVGLSGYTKEGLPVFAVGVGQSTYDK----ASVHYY 122
DT+LE + + + G G KEG PV+ +GQ ++ ++ +
Sbjct: 136 FGADTILED--FEFEEAGKVAECYPQGYHGVDKEGRPVYIERLGQIDVNRLMQVTTMDRF 193
Query: 123 VQSHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQMK--MLTSISTVDD 180
+++H++ E V P + + +LD+ G+ + S+ ++ + +D
Sbjct: 194 IKNHVREFEKNFAVKFPACSIATKCHIDQSTTILDVQGVGMKQFSKAARDLIGQLQKIDG 253
Query: 181 LNYPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPH 240
NYPE +++N F W VK L +T K+ VL + +LL+++D S LP
Sbjct: 254 DNYPETLCRMFIINAGPGFRLLWSTVKSFLDPKTTAKIHVLGNKYQSKLLEVIDASELPE 313
Query: 241 F----CRREG 246
F C+ EG
Sbjct: 314 FFGGTCQCEG 323
>Os08g0341700 Similar to Phosphatidylinositol transfer-like protein II
Length = 637
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 24/250 (9%)
Query: 13 ALLMDQVEAPLRRTFQNVHQGYPKETLLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTV 72
A+ Q E R + H Y LLRFLKAR+++ KA +M + L WR + DT+
Sbjct: 83 AVFSFQQELFSRNLLPDKHNDY--HMLLRFLKARKFDTEKAIQMWAEMLQWRKEFGADTI 140
Query: 73 LERPIVPVDLYRSIRDSQLV----GLSGYTKEGLPVFAVGVGQSTYDK----ASVHYYVQ 124
LE D D LV G G ++G PV+ +G+ +K +V Y++
Sbjct: 141 LE------DFNFEELDEVLVYYPQGYHGVDRQGRPVYIERLGKVEPNKLMHITTVDRYMK 194
Query: 125 SHIQINEYRDRVILPMLTEKFGRPVTTCVKVLDMTGLKLSALSQMK--MLTSISTVDDLN 182
H+Q E P + R + + +LD+ G+ L S+ ML + +D
Sbjct: 195 YHVQEFERAFHEKFPACSIAAKRHIDSTTTILDVDGVGLKNFSKTARDMLGRMQKIDSDY 254
Query: 183 YPEKTETYYVVNVPYIFSACWKVVKPLLQERTKKKVKVLHGCGRDELLKIMDYSSLPHF- 241
YPE +VVN F W VK L +T K+ VL +LL+++D S LP F
Sbjct: 255 YPETLHQMFVVNAGNGFKLLWNTVKGFLDPKTASKIHVLGTKFHGKLLEVIDASQLPEFL 314
Query: 242 -----CRREG 246
C EG
Sbjct: 315 GGACTCAAEG 324
>Os01g0701900 Similar to Phosphatidylinositol transfer-like protein III
Length = 671
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 13/220 (5%)
Query: 39 LLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGYT 98
+LRFLKAR++++ KA M + L WR + D + E +D + + G
Sbjct: 188 MLRFLKARKFDIDKAKHMWSEMLRWRKEFGADNIEEFDYSELD---DVLECYPQFYHGVD 244
Query: 99 KEGLPVFAVGVGQSTYDK----ASVHYYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVK 154
KEG PV+ +G+ +K ++ YV+ H++ +E ++ P + R + +C
Sbjct: 245 KEGRPVYIELIGKVDPNKLVQVTTIDRYVKYHVKESEKCLQMRFPACSIAAKRHIDSCST 304
Query: 155 VLDMTGLKLSALSQ--MKMLTSISTVDDLNYPEKTETYYVVNVPYIFSACWKVVKPLLQE 212
+LD+ G+ L S+ +++ + +++ NYPE Y++N F W +K L
Sbjct: 305 ILDVQGVGLKNFSKDARELIMRLQKINNDNYPETLHRLYIINAGQGFKMLWGTIKSFLDP 364
Query: 213 RTKKKVKVLHGCGRDELLKIMDYSSLPHF----CRREGSG 248
+T K+ VL +++LL+ +D S LP F CR E G
Sbjct: 365 QTASKIHVLGSKYQNKLLETIDESELPDFLGGKCRCEEHG 404
>Os02g0721800 Similar to Phosphatidylinositol transfer-like protein IV
Length = 612
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 38 TLLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGY 97
T+LRFLKAR+++V KA M D L+WR DT+LE + G G
Sbjct: 105 TMLRFLKARKFDVEKAAHMWADMLHWRKDFGTDTILED--FEFHELEEVLQYYPHGYHGV 162
Query: 98 TKEGLPVFAVGVGQSTYDK----ASVHYYVQSHIQINEYRDRVILPMLTEKFGRPVTTCV 153
KEG PV+ +G+ K +V Y++ H+Q E R P + + + T
Sbjct: 163 DKEGRPVYIELLGKVEPSKLVQITTVERYIKYHVQEFERAFREKFPACSIAAKKHIDTTT 222
Query: 154 KVLDMTGLKLSALSQMK--MLTSISTVDDLNYPEKTETYYVVNVPYIFSACWKVVKPLLQ 211
+LD+ G+ S++ ++ + +D YPE ++VN F W VK LL
Sbjct: 223 TILDVHGVGWKNFSKIARDLVRCMQKIDGDYYPETLHQMFIVNAGPGFKLIWSTVKGLLD 282
Query: 212 ERTKKKVKVLHGCGRDELLKIMDYSSLPHF 241
+T K+ VL + LL+ +D S LP F
Sbjct: 283 PKTSSKIHVLGTKYQHRLLEAIDSSQLPEF 312
>Os02g0133200 Similar to Phosphatidylinositol transfer-like protein IV
Length = 632
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 39 LLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSGYT 98
+LRFL+AR++++ K+ +M D L WR + DT+L+ + + + G G
Sbjct: 119 MLRFLRARKFDIDKSKQMWSDMLQWRKEFGSDTILDD--FQFEEMDQVLEHYPQGHHGVD 176
Query: 99 KEGLPVFAVGVGQSTYDK----ASVHYYVQSHIQINEYRDRVILPMLTEKFGRPVTTCVK 154
++G PV+ +G K S+ YV+ H++ E V P + R V
Sbjct: 177 RDGRPVYIEKLGAIDTAKLLQVTSMDRYVKYHVREFERAFAVKFPACSIAAKRHVDQSTT 236
Query: 155 VLDMTGLKLSALSQMK--MLTSISTVDDLNYPEKTETYYVVNVPYIFSACWKVVKPLLQE 212
+LD++G+ ++ ++ + VD NYPE +++N F W VK L
Sbjct: 237 ILDVSGVGYKNFNKAARDLIGRLQKVDGDNYPETLCRMFIINAGQGFRLLWNTVKSFLDP 296
Query: 213 RTKKKVKVLHGCGRDELLKIMDYSSLPHF----CRREG 246
+T K+ VL + +LL+++D S LP F C EG
Sbjct: 297 KTTAKIHVLGNKYQSKLLEVIDPSELPEFLGGTCTCEG 334
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,044,448
Number of extensions: 454260
Number of successful extensions: 1092
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1076
Number of HSP's successfully gapped: 11
Length of query: 327
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 226
Effective length of database: 11,762,187
Effective search space: 2658254262
Effective search space used: 2658254262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)