Os05g0545000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphatidylinositol transfer-like protein IV.
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Os05g0545000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphatidylinositol transfer-like protein IV.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.7 | 0.247 | 12.7 | 0.204 | 0.227 | 0.542 | -0.126 | 0.142 | 0.407 | 17 | 18.09 | 45 | -- | -- |
| 27.66 | 0.245 | 12.7 | 0.207 | 0.228 | 0.543 | -0.164 | -- | 0.403 | 16.8 | 17.68 | 43 | -- | -- |
| 27.59 | 0.245 | 12.7 | 0.206 | 0.228 | 0.542 | -- | 0.159 | 0.408 | 16.8 | 17.76 | 43 | -- | -- |
| 27.73 | 0.245 | 12.7 | 0.198 | 0.226 | 0.543 | -- | -- | 0.407 | 16.9 | 17.76 | 43 | -- | -- |
| 30.06 | 0.255 | 12.7 | 0.181 | -- | 0.497 | -- | 0.147 | 0.39 | -- | 17.76 | 42 | -- | -- |
| 37.08 | 0.285 | 12.7 | 0.171 | 0.436 | -- | 0.228 | -- | 0.387 | 22.4 | -- | -- | -- | -- |
| 37.29 | 0.286 | 12.7 | 0.162 | 0.435 | -- | -- | -- | 0.386 | 22.3 | -- | -- | -- | -- |
| 30.18 | 0.256 | 12.7 | 0.18 | -- | 0.49 | -- | -- | 0.398 | -- | 17.76 | 42 | -- | -- |
| 28.76 | 0.25 | 12.7 | -- | 0.219 | 0.537 | -- | -- | 0.385 | 17 | 17.77 | 43 | -- | -- |
| 48.85 | 0.327 | 12.7 | 0.169 | -- | -- | -- | -- | 0.388 | -- | -- | -- | -- | -- |
| 37.98 | 0.288 | 12.7 | -- | 0.436 | -- | -- | -- | 0.368 | 22.4 | -- | -- | -- | -- |
| 31.09 | 0.26 | 12.7 | -- | -- | 0.489 | -- | -- | 0.38 | -- | 17.76 | 42 | -- | -- |
| 49.6 | 0.329 | 12.7 | -- | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 37 | 24.04 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 40 | 24.15 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 43 | 24.21 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 45 | 24.24 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 50 | 24.32 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 53 | 24.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 68 | 24.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 72 | 24.54 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 87 | 24.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 111 | 24.97 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 116 | 24.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 144 | 25.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 145 | 25.16 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 146 | 25.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 148 | 25.17 | radiation | 20.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 149 | 25.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 160 | 25.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 163 | 25.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 167 | 25.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 168 | 25.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 169 | 25.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 174 | 25.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 180 | 25.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 181 | 25.27 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 182 | 25.27 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 189 | 25.29 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 195 | 25.32 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 217 | 25.43 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 231 | 25.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 233 | 25.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 239 | 25.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 254 | 25.55 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 266 | 25.56 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 267 | 25.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 272 | 25.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 273 | 25.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 275 | 25.58 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 300 | 25.63 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 301 | 25.64 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 302 | 25.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 305 | 25.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 325 | 25.70 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 392 | 25.81 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |
| 399 | 25.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 416 | 25.83 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 426 | 25.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 427 | 25.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 434 | 25.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 449 | 25.91 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 451 | 25.91 | radiation | 30.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 454 | 25.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 471 | 25.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 472 | 25.96 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 7 | 7 |
| 474 | 25.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 498 | 26.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 503 | 26.00 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 525 | 26.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 551 | 26.10 | radiation | 20.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 578 | 26.14 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 602 | 26.18 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 8 |
| 605 | 26.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 625 | 26.21 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 635 | 26.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 640 | 26.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 643 | 26.22 | radiation | 20.0 | 30 | < th | dose independent | rect. | 14 | 20 |
| 651 | 26.23 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 667 | 26.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 679 | 26.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 684 | 26.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 686 | 26.28 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 703 | 26.29 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 714 | 26.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 716 | 26.33 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 719 | 26.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 720 | 26.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 766 | 26.40 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 783 | 26.40 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 793 | 26.41 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 822 | 26.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 865 | 26.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 880 | 26.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 881 | 26.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 888 | 26.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 912 | 26.57 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 916 | 26.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 920 | 26.58 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 945 | 26.60 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 991 | 26.64 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 18 |