Os09g0481100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphatidylinositol transfer-like protein IV.
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Os09g0481100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphatidylinositol transfer-like protein IV.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 421.64 | 0.965 | 5.15 | -3.29 | 2.09 | 1.68 | 1.49 | -3.39 | -1.33 | 5.29 | 25.8 | 1428 | -- | -- |
| 431.4 | 0.967 | 5.03 | -2.24 | 2.07 | 1.42 | 1.37 | -- | -0.99 | 5.3 | 25.85 | 1416 | -- | -- |
| 426.89 | 0.962 | 5.16 | -3.25 | 2.1 | 1.68 | -- | -3.25 | -1.32 | 5.17 | 25.85 | 1432 | -- | -- |
| 435.77 | 0.972 | 5.03 | -2.25 | 2.08 | 1.42 | -- | -- | -0.998 | 5.18 | 25.86 | 1416 | -- | -- |
| 637.24 | 1.18 | 5.2 | -3.08 | -- | 2.11 | -- | -2.86 | -1.39 | -- | 25.6 | 1291 | -- | -- |
| 495.78 | 1.04 | 4.92 | -1.75 | 2.16 | -- | 1.41 | -- | -0.526 | 5.15 | -- | -- | -- | -- |
| 500.52 | 1.05 | 4.93 | -1.75 | 2.17 | -- | -- | -- | -0.533 | 5.03 | -- | -- | -- | -- |
| 644.3 | 1.18 | 5.1 | -2.25 | -- | 1.9 | -- | -- | -1.12 | -- | 25.51 | 1294 | -- | -- |
| 557.32 | 1.1 | 4.97 | -- | 2.06 | 0.819 | -- | -- | -0.583 | 5.11 | 25.9 | 1416 | -- | -- |
| 747.41 | 1.28 | 4.95 | -1.67 | -- | -- | -- | -- | -0.478 | -- | -- | -- | -- | -- |
| 581.53 | 1.13 | 4.89 | -- | 2.14 | -- | -- | -- | -0.338 | 5.06 | -- | -- | -- | -- |
| 767.18 | 1.29 | 5 | -- | -- | 1.32 | -- | -- | -0.698 | -- | 25.54 | 1280 | -- | -- |
| 821.4 | 1.34 | 4.91 | -- | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 422.11 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 3 | 423.10 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 4 | 423.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 18 |
| 17 | 424.66 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 23 | 424.90 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 24 | 424.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 30 | 425.20 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 33 | 425.31 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 42 | 425.35 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 47 | 425.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 50 | 425.44 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 61 | 425.55 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 66 | 425.58 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 85 | 425.69 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 96 | 425.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 97 | 425.75 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 98 | 425.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 102 | 425.78 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 106 | 425.80 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 111 | 425.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 116 | 425.84 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 125 | 425.89 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 128 | 425.91 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 160 | 425.98 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 161 | 425.99 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 186 | 426.03 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 249 | 426.16 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 311 | 426.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 393 | 426.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 394 | 426.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 440 | 426.59 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 441 | 426.59 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 451 | 426.60 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 462 | 426.61 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 513 | 426.72 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 21 | 10 |
| 566 | 426.84 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 607 | 426.92 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 616 | 426.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 643 | 427.04 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 646 | 427.05 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 648 | 427.05 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 689 | 427.13 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 691 | 427.14 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 725 | 427.19 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 764 | 427.28 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 851 | 427.46 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 857 | 427.47 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 908 | 427.55 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |