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Os01g0701900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphatidylinositol transfer-like protein III.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.57 (0.0297) R2 : 0.77
β1 : -2.06 (0.109) R2dD : 0.19 R2D : 0.131
β2 : 2.93 (0.0885) R2dC : 0.843 R2C : -0.0148
β3 : 3.2 (0.11) R2dE : 0.672 R2E : -0.294
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.458 (0.0643) R2dN8 : 0.0358 R2N8 : -0.0344
σ : 0.554
deviance : 141.34
__
_____
C
peak time of C : 14
E
wheather : temperature
threshold : 0.3811
memory length : 219
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12.8
open length of G : 18.9

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
132.57 0.541 7.62 -2.41 2.68 3.3 -1.91 -2.89 -0.6 14.1 6.077 240 12.4 19.3
140.04 0.551 7.59 -2.12 2.84 3.34 -0.765 -- -0.499 14 4.007 225 12.7 19.1
140.56 0.552 7.59 -2.27 2.81 3.23 -- -1.14 -0.529 14 3.665 222 12.7 19
141.34 0.554 7.57 -2.06 2.93 3.2 -- -- -0.458 14 0.3811 219 12.8 18.9
288.12 0.791 7.65 -2.65 -- 3.26 -- -2.02 -0.742 -- 22.1 161 12.3 20.8
314.15 0.831 7.53 -1.74 1.99 -- -1.15 -- -0.0879 16.6 -- -- -- --
317.65 0.835 7.53 -1.75 1.98 -- -- -- -0.094 16.7 -- -- -- --
295.91 0.801 7.61 -2.24 -- 3.2 -- -- -0.522 -- 23.15 154 12.7 20
248.23 0.734 7.52 -- 3.16 2.9 -- -- -0.181 14.2 -10.25 219 13 18.6
526.49 1.07 7.52 -1.82 -- -- -- -- -0.146 -- -- -- -- --
398.06 0.933 7.49 -- 2.02 -- -- -- 0.101 16.7 -- -- -- --
418.26 0.953 7.52 -- -- 3.18 -- -- -0.142 -- 24.13 96 13.5 18.8
614.08 1.16 7.47 -- -- -- -- -- 0.0563 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 142.00 temperature 10.0 270 > th dose dependent rect. 12 19
3 144.76 temperature 10.0 90 > th dose dependent rect. 14 18
5 146.26 humidity 50.0 270 > th dose independent rect. 17 20
6 146.60 atmosphere 995.0 270 > th dose independent rect. 17 20
7 147.05 humidity 50.0 270 > th dose independent rect. 18 18
8 147.10 precipitation 0.1 270 < th dose independent rect. 12 6
9 147.10 precipitation 0.1 270 < th dose dependent rect. 12 6
10 147.18 temperature 10.0 270 > th dose dependent rect. 12 6
11 148.14 atmosphere 995.0 270 > th dose independent rect. 18 18
12 148.22 radiation 1.0 270 > th dose independent rect. 12 18
14 148.74 humidity 90.0 270 < th dose independent rect. 12 6
15 149.02 precipitation 0.1 270 < th dose independent rect. 13 4
16 149.02 precipitation 0.1 270 < th dose dependent rect. 13 4
18 149.09 atmosphere 1010.0 270 < th dose independent rect. 12 6
19 149.16 temperature 10.0 270 > th dose independent rect. 12 6
22 149.16 temperature 10.0 270 > th dose independent rect. 18 18
23 149.33 temperature 10.0 270 > th dose independent rect. 13 4
25 149.33 atmosphere 1010.0 270 < th dose independent rect. 13 4
27 149.33 temperature 10.0 270 > th dose independent rect. 17 20
28 149.69 temperature 10.0 10 > th dose dependent rect. 14 19
29 150.08 temperature 10.0 270 > th dose dependent rect. 13 4
31 150.24 wind 9.0 270 < th dose independent rect. 12 6
32 150.51 wind 9.0 270 < th dose independent rect. 13 4
35 150.88 wind 1.0 270 > th dose independent rect. 12 6
36 151.35 wind 9.0 270 < th dose independent rect. 18 18
38 151.55 wind 1.0 270 > th dose independent rect. 13 4
40 152.44 wind 9.0 270 < th dose independent rect. 17 20
44 153.24 precipitation 0.1 270 < th dose independent rect. 18 18
45 153.24 precipitation 0.1 270 < th dose dependent rect. 18 18
47 154.02 humidity 90.0 270 < th dose independent rect. 13 4
53 155.33 radiation 1.0 270 > th dose independent rect. 12 7
64 156.02 precipitation 0.1 270 < th dose independent rect. 17 20
65 156.02 precipitation 0.1 270 < th dose dependent rect. 17 20
79 157.21 precipitation 0.1 270 < th dose independent rect. 12 19
80 157.21 precipitation 0.1 270 < th dose dependent rect. 12 19
81 157.40 radiation 1.0 270 > th dose independent rect. 13 4
82 157.42 temperature 10.0 270 > th dose dependent rect. 14 2
88 158.06 wind 1.0 270 > th dose independent rect. 7 5
91 158.17 humidity 50.0 270 > th dose independent rect. 7 5
112 159.48 atmosphere 995.0 270 > th dose independent rect. 13 4
116 160.01 wind 1.0 270 > th dose independent rect. 18 18
117 160.39 temperature 10.0 270 > th dose independent rect. 7 5
118 160.39 atmosphere 995.0 270 > th dose independent rect. 7 5
119 160.39 atmosphere 1015.0 270 < th dose independent rect. 7 5
120 160.39 temperature 10.0 270 > th dose independent rect. 12 19
127 160.70 precipitation 0.1 270 < th dose independent rect. 7 5
128 160.70 precipitation 0.1 270 < th dose dependent rect. 7 5
155 161.28 wind 1.0 270 > th dose independent rect. 17 20
161 161.50 wind 9.0 270 < th dose independent rect. 12 19
166 162.05 wind 9.0 270 < th dose independent rect. 7 5
174 162.46 atmosphere 995.0 270 > th dose independent rect. 12 6
213 164.62 radiation 20.0 270 < th dose dependent rect. 16 10
226 165.71 radiation 40.0 90 < th dose independent rect. 13 6
238 166.06 precipitation 0.1 270 < th dose independent rect. 22 10
240 166.06 precipitation 0.1 270 < th dose dependent rect. 22 10
244 166.24 humidity 50.0 270 > th dose independent rect. 17 9
250 166.57 wind 7.0 270 < th dose independent rect. 22 10
252 166.60 precipitation 0.1 270 < th dose independent rect. 2 15
253 166.60 atmosphere 1015.0 270 < th dose dependent rect. 13 4
254 166.60 precipitation 0.1 270 < th dose dependent rect. 2 15
273 167.30 temperature 10.0 10 > th dose dependent rect. 14 6
279 167.56 atmosphere 995.0 270 > th dose independent rect. 17 9
282 167.68 radiation 1.0 90 > th dose independent rect. 9 5
299 168.15 temperature 10.0 270 > th dose independent rect. 22 10
300 168.15 temperature 30.0 270 < th dose independent rect. 22 10
301 168.15 humidity 50.0 270 > th dose independent rect. 22 10
303 168.15 atmosphere 995.0 270 > th dose independent rect. 22 10
304 168.15 temperature 10.0 270 > th dose independent rect. 8 14
312 168.47 radiation 40.0 270 < th dose independent rect. 22 10
332 169.33 temperature 30.0 270 < th dose independent rect. 17 9
334 169.39 temperature 10.0 270 > th dose independent rect. 17 9
335 169.39 radiation 20.0 270 < th dose independent rect. 17 9
338 169.39 temperature 10.0 270 > th dose independent rect. 2 15
339 169.39 atmosphere 1015.0 270 < th dose independent rect. 2 15
357 169.86 wind 9.0 270 < th dose independent rect. 17 9
359 169.87 wind 9.0 270 < th dose independent rect. 2 15
391 171.12 radiation 1.0 90 < th dose dependent sin 14 NA
422 172.09 radiation 1.0 90 > th dose independent sin 14 NA
424 172.28 atmosphere 1015.0 270 < th dose independent rect. 18 18
431 172.40 radiation 1.0 90 < th dose independent sin 14 NA
448 173.15 temperature 30.0 270 < th dose independent rect. 17 19
449 173.18 humidity 50.0 270 > th dose independent rect. 8 14
450 173.21 humidity 50.0 270 > th dose independent rect. 13 3
486 174.56 atmosphere 995.0 270 > th dose independent rect. 8 14
492 174.70 atmosphere 995.0 270 > th dose independent rect. 12 19
504 175.10 wind 9.0 270 < th dose independent rect. 8 14
512 175.28 precipitation 0.1 270 < th dose independent rect. 8 14
513 175.28 precipitation 0.1 270 < th dose dependent rect. 8 14
521 175.46 atmosphere 1015.0 270 < th dose independent rect. 23 9
522 175.48 radiation 40.0 90 < th dose independent rect. 14 19
524 175.56 precipitation 0.1 270 < th dose independent rect. 17 9
525 175.56 precipitation 0.1 270 < th dose dependent rect. 17 9
526 175.69 temperature 10.0 270 > th dose dependent rect. 23 9
529 175.84 atmosphere 1015.0 270 < th dose dependent rect. 12 6
544 176.16 temperature 20.0 10 > th dose independent rect. 14 6
552 176.62 wind 9.0 270 < th dose dependent rect. 23 9
554 176.67 atmosphere 1015.0 270 < th dose dependent rect. 14 2
561 176.95 radiation 1.0 10 > th dose independent rect. 9 5
574 177.29 radiation 1.0 270 > th dose independent rect. 9 2
576 177.33 wind 1.0 270 > th dose independent rect. 17 9
586 177.54 atmosphere 1015.0 270 < th dose independent rect. 12 19
588 177.66 precipitation 0.1 10 < th dose independent rect. 14 6
589 177.66 precipitation 0.1 10 < th dose dependent rect. 14 6
612 178.15 wind 1.0 10 > th dose independent rect. 14 6
639 178.71 wind 1.0 270 > th dose independent rect. 8 15
640 178.73 radiation 40.0 270 < th dose independent rect. 14 2
645 178.99 temperature 10.0 10 > th dose independent rect. 14 6
647 178.99 atmosphere 1010.0 10 < th dose independent rect. 14 6
649 178.99 temperature 10.0 10 > th dose independent rect. 20 18
650 178.99 atmosphere 995.0 10 > th dose independent rect. 20 18
655 179.08 temperature 10.0 10 > th dose independent rect. 9 5
657 179.08 atmosphere 995.0 10 > th dose independent rect. 9 5
658 179.08 atmosphere 1015.0 10 < th dose independent rect. 9 5
659 179.08 precipitation 0.1 10 < th dose independent rect. 9 5
660 179.08 temperature 10.0 10 > th dose independent rect. 14 19
662 179.08 precipitation 0.1 10 < th dose dependent rect. 9 5
691 179.64 radiation 40.0 10 < th dose independent rect. 14 6
692 179.65 humidity 90.0 10 < th dose independent rect. 14 6
714 179.94 atmosphere 1015.0 10 < th dose dependent rect. 14 6
720 180.13 radiation 40.0 10 < th dose independent rect. 14 19
742 180.71 atmosphere 1015.0 270 < th dose independent rect. 17 20
745 180.76 precipitation 0.1 10 < th dose independent rect. 14 19
746 180.76 precipitation 0.1 10 < th dose dependent rect. 14 19
750 180.87 radiation 1.0 270 < th dose independent sin 16 NA
755 180.97 radiation 1.0 270 > th dose independent sin 16 NA
828 182.27 wind 1.0 270 > th dose dependent rect. 13 4
849 182.47 temperature 10.0 270 > th dose dependent rect. 8 4
851 182.52 temperature 10.0 1440 > th dose independent rect. 10 5
854 182.52 temperature 10.0 1440 > th dose independent rect. 15 19
876 182.85 temperature 10.0 1440 > th dose independent rect. 15 5
879 182.85 temperature 10.0 1440 > th dose independent rect. 20 19
885 182.97 wind 9.0 10 < th dose independent rect. 14 6
886 182.98 wind 9.0 10 < th dose independent rect. 14 19
893 183.07 precipitation 0.1 10 < th dose independent rect. 20 18
895 183.07 precipitation 0.1 10 < th dose dependent rect. 20 18
903 183.29 atmosphere 995.0 270 > th dose independent rect. 2 15
940 183.88 wind 9.0 10 < th dose independent rect. 20 18
954 184.15 wind 9.0 10 < th dose independent rect. 9 5
963 184.30 humidity 50.0 270 > th dose dependent rect. 22 10
982 184.59 atmosphere 1015.0 270 < th dose independent rect. 8 14