Os10g0122600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cellular retinaldehyde binding/alpha-tocopherol transport family protein.
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Os10g0122600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cellular retinaldehyde binding/alpha-tocopherol transport family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.38 | 0.578 | 6.17 | 3.73 | 0.38 | -1.61 | 0.137 | 1.45 | 1.62 | 13.2 | 14.86 | 18676 | -- | -- |
| 152.4 | 0.575 | 6.25 | 3.48 | 0.364 | -1.84 | 0.128 | -- | 1.54 | 13.3 | 11.62 | 18401 | -- | -- |
| 151.23 | 0.573 | 6.16 | 3.77 | 0.368 | -1.61 | -- | 1.56 | 1.63 | 13.2 | 13.5 | 18563 | -- | -- |
| 152.46 | 0.575 | 6.25 | 3.49 | 0.361 | -1.83 | -- | -- | 1.54 | 13.2 | 11.53 | 18340 | -- | -- |
| 159.38 | 0.588 | 6.17 | 3.75 | -- | -1.73 | -- | 1.25 | 1.63 | -- | 11.7 | 18314 | -- | -- |
| 201.67 | 0.666 | 6.4 | 2.09 | 0.422 | -- | 0.215 | -- | 0.83 | 13.3 | -- | -- | -- | -- |
| 201.85 | 0.665 | 6.4 | 2.09 | 0.421 | -- | -- | -- | 0.831 | 13.2 | -- | -- | -- | -- |
| 160.48 | 0.59 | 6.24 | 3.51 | -- | -1.89 | -- | -- | 1.56 | -- | 10.59 | 18287 | -- | -- |
| 310.85 | 0.821 | 6.46 | -- | 0.356 | -0.367 | -- | -- | 0.56 | 12.7 | 28.3 | 5605 | -- | -- |
| 212.83 | 0.682 | 6.41 | 2.08 | -- | -- | -- | -- | 0.823 | -- | -- | -- | -- | -- |
| 317.53 | 0.834 | 6.46 | -- | 0.386 | -- | -- | -- | 0.598 | 12.9 | -- | -- | -- | -- |
| 317.43 | 0.83 | 6.45 | -- | -- | -0.415 | -- | -- | 0.644 | -- | 28.1 | 6971 | -- | -- |
| 326.83 | 0.844 | 6.46 | -- | -- | -- | -- | -- | 0.592 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.92 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 22 | 144.05 | humidity | 90.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 41 | 144.75 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 58 | 145.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 84 | 145.33 | humidity | 90.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 146 | 146.05 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 240 | 146.97 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 252 | 147.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 259 | 147.13 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 260 | 147.15 | humidity | 90.0 | 14400 | < th | dose independent | no | NA | NA |
| 286 | 147.35 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 300 | 147.42 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 357 | 147.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 386 | 148.16 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 391 | 148.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 396 | 148.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 430 | 149.12 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 431 | 149.12 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 437 | 149.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 445 | 149.40 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 448 | 149.46 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 454 | 149.57 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 455 | 149.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 456 | 149.59 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 467 | 149.78 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 475 | 149.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 477 | 149.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 11 |
| 479 | 149.88 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 11 |
| 489 | 150.01 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 500 | 150.15 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 531 | 150.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 588 | 150.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 665 | 150.92 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 676 | 150.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 686 | 151.00 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 692 | 151.02 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 695 | 151.03 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 722 | 151.12 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 763 | 151.25 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 789 | 151.34 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 836 | 151.52 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 876 | 151.63 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 885 | 151.65 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 955 | 151.86 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 989 | 151.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |