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Os02g0721800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphatidylinositol transfer-like protein IV.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.15 (0.0194) R2 : 0.0429
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.185 (0.0408) R2dN8 : 0.0554 R2N8 : 0.0429
σ : 0.365
deviance : 61.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.07 0.262 9.15 -0.203 0.5 0.334 0.263 0.112 0.144 4.77 19.25 10 -- --
30.9 0.259 9.15 -0.195 0.495 0.342 0.299 -- 0.145 4.96 16.98 9 -- --
30.97 0.259 9.15 -0.189 0.498 0.34 -- 0.159 0.14 4.94 16.98 9 -- --
31.1 0.26 9.15 -0.195 0.496 0.344 -- -- 0.141 4.97 16.94 9 -- --
42.92 0.305 9.15 -0.173 -- 0.441 -- 0.168 0.15 -- 16.85 7 -- --
35.06 0.278 9.16 -0.213 0.661 -- 0.289 -- 0.148 3.23 -- -- -- --
35.33 0.278 9.16 -0.219 0.663 -- -- -- 0.146 3.23 -- -- -- --
43.02 0.305 9.16 -0.178 -- 0.446 -- -- 0.145 -- 16.85 7 -- --
32.1 0.264 9.15 -- 0.49 0.352 -- -- 0.164 5.02 16.98 9 -- --
60.24 0.363 9.16 -0.191 -- -- -- -- 0.163 -- -- -- -- --
36.59 0.283 9.15 -- 0.658 -- -- -- 0.17 3.23 -- -- -- --
43.87 0.308 9.16 -- -- 0.454 -- -- 0.16 -- 16.86 7 -- --
61.2 0.365 9.15 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.56 wind 7.0 270 < th dose independent rect. 6 21
3 27.76 temperature 10.0 270 > th dose dependent rect. 6 8
5 27.85 wind 7.0 270 < th dose independent rect. 5 23
6 27.86 wind 7.0 270 < th dose independent rect. 9 16
18 28.37 temperature 25.0 270 < th dose independent rect. 1 18
23 28.48 temperature 25.0 90 < th dose independent rect. 4 17
25 28.49 wind 9.0 270 < th dose dependent rect. 6 20
28 28.53 wind 9.0 270 < th dose dependent rect. 7 18
41 28.64 radiation 30.0 10 < th dose dependent rect. 5 17
44 28.68 wind 7.0 270 < th dose independent rect. 6 9
47 28.70 radiation 20.0 4320 < th dose dependent rect. 23 6
52 28.72 temperature 30.0 30 < th dose dependent rect. 4 18
60 28.77 radiation 40.0 270 < th dose dependent rect. 2 16
61 28.77 temperature 10.0 10 > th dose dependent rect. 8 20
71 28.84 wind 5.0 270 < th dose independent rect. 18 8
75 28.87 radiation 20.0 10 < th dose independent rect. 5 18
83 28.91 temperature 25.0 270 < th dose independent rect. 1 8
84 28.91 radiation 30.0 270 < th dose independent rect. 14 16
85 28.91 temperature 10.0 10 > th dose dependent rect. 8 8
95 28.98 atmosphere 995.0 30 > th dose dependent rect. 4 18
103 28.99 radiation 40.0 90 < th dose dependent rect. 4 18
116 29.02 atmosphere 1000.0 10 > th dose independent rect. 5 17
120 29.04 wind 1.0 90 > th dose independent rect. 23 16
161 29.11 radiation 40.0 270 < th dose dependent rect. 14 16
163 29.12 radiation 40.0 90 < th dose independent rect. 4 18
174 29.15 radiation 1.0 4320 < th dose independent rect. 24 5
184 29.17 atmosphere 995.0 270 > th dose independent rect. 14 16
189 29.18 wind 1.0 90 > th dose dependent rect. 15 8
208 29.22 wind 5.0 90 < th dose independent rect. 21 7
210 29.22 radiation 40.0 270 < th dose independent rect. 2 16
232 29.25 atmosphere 995.0 270 > th dose independent rect. 2 17
234 29.25 precipitation 0.1 270 < th dose independent rect. 6 21
238 29.25 precipitation 0.1 270 < th dose dependent rect. 6 21
245 29.27 radiation 1.0 270 < th dose independent rect. 3 15
255 29.30 radiation 20.0 270 < th dose independent rect. 2 16
266 29.32 wind 7.0 270 < th dose independent rect. 18 23
278 29.34 wind 7.0 10 < th dose independent rect. 8 21
287 29.36 wind 5.0 90 < th dose independent rect. 13 15
304 29.39 precipitation 0.1 270 < th dose independent rect. 19 7
307 29.39 precipitation 0.1 270 < th dose dependent rect. 19 7
330 29.42 wind 7.0 270 < th dose independent rect. 21 16
336 29.43 precipitation 0.1 270 < th dose independent rect. 9 16
337 29.43 wind 9.0 270 < th dose dependent rect. 18 8
339 29.43 precipitation 0.1 270 < th dose dependent rect. 9 16
351 29.45 radiation 40.0 90 < th dose dependent rect. 4 15
355 29.46 radiation 20.0 270 < th dose independent rect. 1 8
369 29.49 temperature 10.0 270 > th dose independent rect. 6 8
370 29.49 atmosphere 995.0 270 > th dose independent rect. 6 8
371 29.49 atmosphere 1015.0 270 < th dose independent rect. 6 8
373 29.49 temperature 10.0 270 > th dose independent rect. 14 16
380 29.50 precipitation 0.1 270 < th dose independent rect. 6 8
381 29.50 temperature 15.0 270 > th dose independent rect. 2 17
384 29.50 precipitation 0.1 270 < th dose dependent rect. 6 8
385 29.50 temperature 15.0 10 > th dose dependent rect. 9 17
432 29.56 radiation 40.0 270 < th dose dependent rect. 1 8
449 29.59 temperature 10.0 270 > th dose independent rect. 19 7
450 29.59 temperature 30.0 270 < th dose independent rect. 19 7
451 29.59 humidity 50.0 270 > th dose independent rect. 19 7
453 29.59 atmosphere 995.0 270 > th dose independent rect. 19 7
454 29.59 radiation 1.0 270 < th dose independent rect. 19 7
462 29.59 atmosphere 1015.0 270 < th dose independent rect. 2 17
463 29.59 radiation 1.0 270 < th dose dependent rect. 19 7
483 29.62 wind 9.0 270 < th dose dependent rect. 7 7
501 29.64 humidity 50.0 270 > th dose independent rect. 14 16
505 29.65 wind 5.0 270 < th dose independent rect. 21 4
525 29.69 humidity 50.0 270 > th dose independent rect. 6 8
529 29.69 wind 5.0 270 < th dose independent rect. 19 19
552 29.71 radiation 40.0 270 < th dose independent rect. 1 20
563 29.73 radiation 1.0 90 > th dose independent rect. 7 9
564 29.73 temperature 15.0 90 > th dose independent rect. 4 17
567 29.73 humidity 50.0 270 > th dose dependent rect. 2 4
584 29.76 radiation 10.0 270 < th dose independent rect. 2 5
621 29.78 wind 1.0 270 > th dose dependent rect. 13 8
625 29.79 radiation 1.0 10 > th dose independent rect. 8 8
637 29.80 atmosphere 995.0 270 > th dose independent rect. 13 8
643 29.81 precipitation 0.1 90 < th dose independent rect. 21 7
648 29.81 atmosphere 995.0 270 > th dose independent rect. 1 20
652 29.81 precipitation 0.1 90 < th dose dependent rect. 21 7
657 29.82 precipitation 0.1 270 < th dose independent rect. 2 4
667 29.82 precipitation 0.1 270 < th dose dependent rect. 2 4
668 29.82 radiation 30.0 270 < th dose dependent rect. 2 5
678 29.83 temperature 10.0 90 > th dose independent rect. 21 7
679 29.83 temperature 30.0 90 < th dose independent rect. 21 7
680 29.83 humidity 50.0 90 > th dose independent rect. 21 7
683 29.83 atmosphere 995.0 90 > th dose independent rect. 21 7
684 29.83 radiation 1.0 90 < th dose independent rect. 21 7
693 29.83 atmosphere 1015.0 90 < th dose independent rect. 4 17
696 29.83 radiation 1.0 90 < th dose dependent rect. 21 7
769 29.88 wind 9.0 270 < th dose independent rect. 2 4
770 29.88 temperature 10.0 270 > th dose independent rect. 2 4
773 29.88 humidity 50.0 270 > th dose independent rect. 2 4
776 29.88 atmosphere 995.0 270 > th dose independent rect. 2 4
777 29.88 atmosphere 1015.0 270 < th dose independent rect. 2 4
797 29.88 temperature 10.0 270 > th dose independent rect. 7 19
832 29.90 atmosphere 1015.0 10 < th dose dependent rect. 8 8
837 29.91 humidity 50.0 90 > th dose independent rect. 16 15
838 29.91 humidity 50.0 270 > th dose independent rect. 21 16
852 29.92 radiation 20.0 10 < th dose dependent sin 21 NA
860 29.93 humidity 90.0 270 > th dose independent rect. 3 2
865 29.93 atmosphere 1010.0 270 < th dose independent rect. 13 8
900 29.94 temperature 15.0 270 > th dose independent rect. 1 20
903 29.94 atmosphere 995.0 270 > th dose dependent rect. 2 5
912 29.94 temperature 25.0 90 > th dose dependent rect. 19 21
913 29.95 humidity 90.0 270 > th dose independent rect. 2 4
971 29.96 radiation 1.0 270 < th dose dependent sin 1 NA
992 29.98 wind 1.0 270 > th dose independent rect. 6 8