Os02g0133200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphatidylinositol transfer-like protein IV.
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Os02g0133200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphatidylinositol transfer-like protein IV.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.05 | 0.367 | 3.02 | -0.147 | 0.192 | 0.612 | -0.127 | -0.0188 | -0.0294 | 12.7 | 1000 | 11714 | -- | -- |
| 60.53 | 0.362 | 3.02 | -0.131 | 0.201 | 0.606 | -0.248 | -- | -0.0287 | 12.7 | 997.7 | 11171 | -- | -- |
| 61.1 | 0.364 | 3.02 | -0.153 | 0.191 | 0.63 | -- | -0.105 | -0.0305 | 12.8 | 1000 | 11696 | -- | -- |
| 60.51 | 0.362 | 3.02 | -0.145 | 0.196 | 0.602 | -- | -- | -0.0396 | 12.8 | 997.6 | 11170 | -- | -- |
| 62.96 | 0.37 | 3.02 | -0.155 | -- | 0.6 | -- | -0.0413 | -0.0555 | -- | 997.7 | 11251 | -- | -- |
| 69.61 | 0.391 | 3.03 | -0.0245 | 0.202 | -- | -0.134 | -- | -0.0919 | 12.8 | -- | -- | -- | -- |
| 69.68 | 0.391 | 3.03 | -0.0293 | 0.203 | -- | -- | -- | -0.0925 | 12.9 | -- | -- | -- | -- |
| 62.93 | 0.369 | 3.02 | -0.154 | -- | 0.6 | -- | -- | -0.0445 | -- | 997.7 | 11253 | -- | -- |
| 61.04 | 0.364 | 3.02 | -- | 0.199 | 0.57 | -- | -- | -0.0285 | 12.9 | 997.7 | 11133 | -- | -- |
| 72.24 | 0.397 | 3.03 | -0.0368 | -- | -- | -- | -- | -0.0963 | -- | -- | -- | -- | -- |
| 69.7 | 0.391 | 3.03 | -- | 0.203 | -- | -- | -- | -0.0893 | 12.9 | -- | -- | -- | -- |
| 63.53 | 0.371 | 3.02 | -- | -- | 0.571 | -- | -- | -0.0309 | -- | 997.7 | 11202 | -- | -- |
| 72.27 | 0.397 | 3.03 | -- | -- | -- | -- | -- | -0.0922 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.42 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 21 | 60.30 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 30 | 60.30 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 31 | 60.30 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 76 | 60.39 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 134 | 60.46 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 210 | 60.61 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 242 | 60.74 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 259 | 60.80 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 17 |
| 280 | 60.84 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 303 | 60.89 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 347 | 60.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 368 | 61.00 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 426 | 61.04 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 460 | 61.05 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 464 | 61.05 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 495 | 61.05 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 614 | 61.12 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 624 | 61.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 625 | 61.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 714 | 61.20 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 774 | 61.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 807 | 61.38 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 895 | 61.61 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 935 | 61.73 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 995 | 61.87 | wind | 9.0 | 4320 | > th | dose independent | rect. | 20 | 1 |