BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0915800 Os01g0915800|AK103859
(158 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0915800 Similar to FK506-binding protein 2-2 precursor... 297 3e-81
Os09g0501850 Similar to FK506-binding protein 2-1 precursor... 215 1e-56
Os04g0352400 Peptidylprolyl isomerase, FKBP-type domain con... 112 1e-25
Os02g0491400 Similar to Peptidylprolyl isomerase 110 4e-25
Os08g0525600 Similar to Peptidylprolyl isomerase 110 5e-25
Os06g0663800 Similar to FKBP-type peptidyl-prolyl cis-trans... 96 9e-21
Os04g0446500 Similar to FK506-binding protein 2 precursor (... 91 4e-19
Os05g0458100 Similar to FK506-binding protein 4 (EC 5.2.1.8... 86 1e-17
Os01g0844300 Similar to Peptidylprolyl isomerase 84 5e-17
Os02g0751600 Peptidylprolyl isomerase, FKBP-type domain con... 78 3e-15
Os08g0541400 Peptidylprolyl isomerase, FKBP-type domain con... 69 1e-12
>Os01g0915800 Similar to FK506-binding protein 2-2 precursor (EC 5.2.1.8)
(Peptidyl-prolyl cis- trans isomerase) (PPIase)
(Rotamase) (15 kDa FKBP) (FKBP-15-2)
Length = 158
Score = 297 bits (760), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/158 (93%), Positives = 147/158 (93%)
Query: 1 MGKRQQQRRLVRFXXXXXXXXXXXLILTASAKKSGDVTELQIGVKYKPESCTLQAHKGDK 60
MGKRQQQRRLVRF LILTASAKKSGDVTELQIGVKYKPESCTLQAHKGDK
Sbjct: 1 MGKRQQQRRLVRFAVAAAVVVAAALILTASAKKSGDVTELQIGVKYKPESCTLQAHKGDK 60
Query: 61 IKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMG 120
IKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMG
Sbjct: 61 IKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMG 120
Query: 121 YGERGSPPKIPGGATLIFDTELIAVNGKTTGGASNSEL 158
YGERGSPPKIPGGATLIFDTELIAVNGKTTGGASNSEL
Sbjct: 121 YGERGSPPKIPGGATLIFDTELIAVNGKTTGGASNSEL 158
>Os09g0501850 Similar to FK506-binding protein 2-1 precursor (EC 5.2.1.8)
(Peptidyl-prolyl cis- trans isomerase) (PPIase)
(Rotamase) (15 kDa FKBP) (FKBP-15-1)
Length = 154
Score = 215 bits (548), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 112/119 (94%)
Query: 30 SAKKSGDVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTL 89
SAKKSGDVTELQIGVK+KPESC++QAHKGD++KVHYRG LTDG+ FDSSY+RGDP EF L
Sbjct: 22 SAKKSGDVTELQIGVKHKPESCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFEL 81
Query: 90 GNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAVNGK 148
G GQVIKGWDQG+LGMCVGEKRKLKIP+K+GYG +GSPP IPGGATLIFDTEL+AVNG+
Sbjct: 82 GTGQVIKGWDQGILGMCVGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTELVAVNGE 140
>Os04g0352400 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 585
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 7/98 (7%)
Query: 47 KPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMC 106
+PES GD+++VHY G+L DG+ FDSS DRG PF+F+LG G+VIKGWD+G+ M
Sbjct: 64 RPES-------GDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMK 116
Query: 107 VGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIA 144
GE+ +P ++ YGE GSPP IP ATL FD EL++
Sbjct: 117 KGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVELLS 154
>Os02g0491400 Similar to Peptidylprolyl isomerase
Length = 682
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 62/87 (71%)
Query: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
GD+++VHY G+L DG+ FDSS DR PF+FTLG GQVIKGWD G+ M GE IP
Sbjct: 113 GDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPP 172
Query: 118 KMGYGERGSPPKIPGGATLIFDTELIA 144
++ YGE GSPP IP ATL FD ELI+
Sbjct: 173 ELAYGEDGSPPVIPPNATLQFDVELIS 199
>Os08g0525600 Similar to Peptidylprolyl isomerase
Length = 580
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 60/87 (68%)
Query: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
GD+++VHY G+L DG FDSS DRG PF+F LG GQVIKGWD G+ M GE IP
Sbjct: 64 GDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPP 123
Query: 118 KMGYGERGSPPKIPGGATLIFDTELIA 144
+ YGE GSPP IP ATL FD EL++
Sbjct: 124 DLAYGESGSPPTIPASATLQFDVELLS 150
>Os06g0663800 Similar to FKBP-type peptidyl-prolyl cis-trans isomerase 3,
chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase)
(AtFKBP13) (FK506 binding protein 1)
Length = 218
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 19/137 (13%)
Query: 26 ILTASAKKSGDVTELQI---GVKY--KPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYD 80
+L A+A+ SG L++ G+ + + A +G IK HY G L DG+VFDSSY
Sbjct: 77 VLPAAAEASGGECPLEVAPNGLAFCDRVVGTGAAAEQGQLIKAHYTGRLEDGTVFDSSYK 136
Query: 81 RGDPFEFTLGNGQVIKGWDQGLLG------MCVGEKRKLKIPAKMGYGERGSPPK----- 129
RG P F +G G+VIKGWDQG++G M G KR L++P ++ YG RG+ +
Sbjct: 137 RGKPLTFRVGVGEVIKGWDQGIVGGEGIPPMLAGGKRSLRLPPELAYGARGAGCRGWEPT 196
Query: 130 ---IPGGATLIFDTELI 143
IP +TL+FD E +
Sbjct: 197 SCVIPPNSTLLFDVEYV 213
>Os04g0446500 Similar to FK506-binding protein 2 precursor (EC 5.2.1.8)
(Peptidyl-prolyl cis- trans isomerase) (PPIase)
(Rotamase) (FKBP-13) (FKBP-15)
Length = 525
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
Query: 37 VTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIK 96
+ E+++G KP+ +A G K+ V Y G L +G++FDS+ R F+F LG G+VIK
Sbjct: 423 IEEIEMG---KPDG--KKASPGKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIK 476
Query: 97 GWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAV 145
GWD G+ GM VG+KR+L IP MGYG + P IP +TL+FD EL+ V
Sbjct: 477 GWDIGINGMRVGDKRRLTIPPSMGYGNKRMGP-IPQNSTLVFDVELVNV 524
>Os05g0458100 Similar to FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl
cis-trans isomerase) (PPIase) (Rotamase) (p59 protein)
(HSP binding immunophilin) (HBI) (FKBP52 protein) (52
kDa FK506 binding protein) (FKBP59)
Length = 186
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 61 IKVHYRGSLTD-GSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKM 119
+ VHY G+L + G VFD++++ F F +G G VIK WD L M VGE K+ +
Sbjct: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
Query: 120 GYGERGSPPKIPGGATLIFDTELIAV---NGKTTGGASN 155
YG GSPP+IP ATLIF+ EL+A G + G S+
Sbjct: 95 AYGSAGSPPEIPPNATLIFEVELVACRPRKGSSLGSVSD 133
>Os01g0844300 Similar to Peptidylprolyl isomerase
Length = 185
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 34 SGDVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTD-GSVFDSSYDRGDPFEFTLGNG 92
+GD L+ ++ + T + + VHY G+L + G VFD++++ F F +G G
Sbjct: 8 TGDRCILKTVIRRAKDDATAPSDSLPIVDVHYEGTLAENGEVFDTTHEDNSVFSFEIGEG 67
Query: 93 QVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIA 144
VIK WD + M VGE K+ + YG GSPP+IP ATL F+ ELIA
Sbjct: 68 TVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPPEIPPDATLTFEVELIA 119
>Os02g0751600 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 230
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 54 QAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLG------MCV 107
Q +G I VHY TDG VFDS+Y RG P LG G++++G +QG+ G M V
Sbjct: 126 QPPRGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRGLEQGISGGGGVPPMLV 185
Query: 108 GEKRKLKIPAKMGYGERGS-----PPKIPGGATLIFDTELI 143
G KRKL IPA + YG + IPG TL++D L+
Sbjct: 186 GGKRKLMIPATLAYGPEPAGCFSGDCNIPGNTTLLYDIFLV 226
>Os08g0541400 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 261
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
G ++ +Y + +G +FDSS ++G P+ F +G+GQVIKG D+G+L M VG R+L IP
Sbjct: 164 GFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPG 223
Query: 118 KMGY--GERGSP--PKIPGGATLIFDTELIAVNG 147
+ + G +P P++ + ++FD L+ + G
Sbjct: 224 PLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYIPG 257
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,657,782
Number of extensions: 248202
Number of successful extensions: 314
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 316
Number of HSP's successfully gapped: 11
Length of query: 158
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 65
Effective length of database: 12,179,899
Effective search space: 791693435
Effective search space used: 791693435
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 152 (63.2 bits)