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Os01g0915800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to FK506-binding protein 2-2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-2).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0196) R2 : 0.419
β1 : -1.21 (0.0835) R2dD : 0.362 R2D : -0.0584
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.54 (0.0984) R2dE : 0.501 R2E : 0.0693
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.105 (0.0446) R2dN8 : 0.00947 R2N8 : -0.0477
σ : 0.359
deviance : 59.46
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 18.48
memory length : 2734
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.15 0.352 10.3 -1.39 0.155 0.826 -0.102 -2.13 -0.16 2.6 19.4 2776 -- --
57.8 0.354 10.2 -1.25 0.171 1.63 -0.27 -- -0.12 3.28 18.46 3469 -- --
56.18 0.349 10.3 -1.4 0.155 0.827 -- -2.13 -0.16 2.77 19.4 2764 -- --
58.01 0.355 10.2 -1.25 0.166 1.63 -- -- -0.122 3.42 18.47 3526 -- --
57.31 0.353 10.3 -1.35 -- 0.879 -- -2.02 -0.142 -- 19.1 2632 -- --
89.83 0.444 10.1 -0.471 0.2 -- -0.295 -- 0.178 2.84 -- -- -- --
90.12 0.445 10.1 -0.464 0.199 -- -- -- 0.18 2.91 -- -- -- --
59.46 0.359 10.2 -1.21 -- 1.54 -- -- -0.105 -- 18.48 2734 -- --
83.55 0.426 10.1 -- 0.168 1.03 -- -- 0.143 2.96 17.43 3300 -- --
92.41 0.449 10.1 -0.456 -- -- -- -- 0.185 -- -- -- -- --
95.8 0.458 10.1 -- 0.19 -- -- -- 0.232 2.9 -- -- -- --
84.34 0.428 10.1 -- -- 0.948 -- -- 0.135 -- 17.9 2556 -- --
97.88 0.462 10.1 -- -- -- -- -- 0.236 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.56 temperature 20 4320 > th dose independent rect. 21 1
2 54.65 temperature 20 4320 < th dose independent rect. 21 1
4 55.26 temperature 20 4320 > th dose independent rect. 18 5
5 55.27 humidity 90 14400 < th dose independent rect. 23 2
7 55.56 temperature 20 4320 < th dose independent rect. 18 5
14 55.95 humidity 90 14400 > th dose dependent rect. 5 2
16 55.98 humidity 90 14400 < th dose independent rect. 23 9
28 56.29 humidity 90 14400 > th dose independent rect. 23 2
30 56.41 humidity 60 43200 < th dose dependent rect. 20 13
35 56.63 radiation 30 14400 > th dose independent rect. 7 1
56 56.78 radiation 10 4320 > th dose dependent rect. 17 15
64 56.90 humidity 90 14400 > th dose independent rect. 23 10
72 57.02 radiation 10 4320 > th dose dependent rect. 6 2
74 57.04 radiation 30 14400 > th dose dependent rect. 7 1
104 57.12 radiation 10 4320 < th dose independent rect. 17 13
105 57.15 humidity 90 14400 > th dose independent rect. 23 12
118 57.33 humidity 90 14400 > th dose independent rect. 23 16
120 57.37 humidity 90 14400 > th dose dependent rect. 24 16
123 57.43 humidity 50 43200 > th dose independent rect. 8 1
133 57.50 radiation 40 14400 < th dose independent rect. 18 14
142 57.57 radiation 40 14400 < th dose independent rect. 24 8
143 57.59 radiation 40 14400 < th dose independent rect. 20 12
148 57.62 humidity 50 43200 < th dose independent rect. 8 1
149 57.62 radiation 40 14400 < th dose independent rect. 7 1
154 57.63 radiation 40 14400 < th dose independent rect. 2 6
161 57.66 temperature 20 1440 < th dose independent rect. 5 1
171 57.72 humidity 60 43200 < th dose dependent rect. 7 2
180 57.76 temperature 15 43200 < th dose dependent rect. 3 1
196 57.87 humidity 50 43200 > th dose independent rect. 19 14
220 58.03 humidity 60 43200 < th dose dependent rect. 2 7
249 58.13 humidity 50 43200 < th dose independent rect. 19 14
253 58.15 temperature 20 1440 > th dose independent rect. 5 2
261 58.21 humidity 90 14400 < th dose independent sin 8 NA
271 58.26 humidity 90 14400 > th dose independent rect. 5 2
273 58.27 temperature 15 43200 < th dose independent rect. 5 1
297 58.38 temperature 15 43200 > th dose independent rect. 5 1
298 58.38 humidity 90 14400 > th dose dependent sin 5 NA
305 58.43 temperature 15 43200 < th dose independent rect. 3 1
312 58.46 humidity 70 43200 < th dose independent rect. 19 1
319 58.48 temperature 15 43200 < th dose independent rect. 3 3
323 58.49 humidity 90 14400 > th dose independent sin 8 NA
338 58.57 temperature 20 4320 > th dose independent sin 16 NA
352 58.62 humidity 50 43200 > th dose independent rect. 2 7
353 58.62 humidity 80 14400 > th dose dependent rect. 24 1
358 58.64 temperature 15 43200 > th dose independent rect. 3 3
386 58.69 humidity 70 43200 > th dose independent rect. 19 2
393 58.70 wind 5 43200 > th dose independent rect. 23 1
405 58.71 temperature 20 4320 < th dose independent sin 16 NA
406 58.71 wind 5 43200 < th dose independent rect. 23 1
448 58.81 humidity 70 43200 > th dose independent rect. 18 4
475 58.85 humidity 60 43200 > th dose independent rect. 19 8
477 58.85 radiation 1 14400 < th dose independent rect. 18 18
482 58.86 radiation 10 4320 < th dose independent rect. 17 4
486 58.87 humidity 60 43200 < th dose independent rect. 19 8
488 58.87 humidity 90 43200 > th dose dependent rect. 11 4
495 58.88 humidity 90 14400 < th dose independent rect. 5 2
498 58.88 humidity 60 43200 > th dose independent rect. 19 6
536 58.92 humidity 60 43200 < th dose independent rect. 19 6
544 58.93 radiation 10 4320 < th dose independent rect. 17 9
570 58.95 temperature 20 1440 > th dose independent rect. 12 19
587 58.96 humidity 60 43200 < th dose dependent rect. 19 9
610 58.99 temperature 20 1440 < th dose independent rect. 12 19
624 59.00 humidity 90 14400 > th dose dependent rect. 3 6
630 59.01 humidity 70 43200 < th dose independent rect. 17 7
632 59.02 atmosphere 1015 43200 < th dose independent rect. 13 1
633 59.02 wind 3 43200 < th dose independent rect. 12 2
634 59.02 atmosphere 1015 43200 < th dose independent rect. 15 6
670 59.05 temperature 15 43200 > th dose independent sin 8 NA
672 59.05 temperature 15 43200 < th dose independent sin 8 NA
675 59.05 atmosphere 1015 43200 > th dose independent rect. 12 1
687 59.05 temperature 20 1440 > th dose independent rect. 15 16
701 59.06 temperature 20 1440 < th dose independent rect. 15 16
721 59.07 temperature 15 43200 < th dose dependent sin 8 NA
726 59.08 humidity 50 43200 < th dose independent rect. 7 5
728 59.08 atmosphere 1015 43200 > th dose independent rect. 12 9
758 59.09 radiation 1 14400 > th dose independent rect. 18 15
765 59.10 humidity 70 43200 > th dose independent rect. 17 7
782 59.11 wind 7 43200 > th dose independent rect. 9 2
815 59.13 wind 3 43200 > th dose independent rect. 12 2
841 59.15 wind 7 43200 < th dose independent rect. 9 1
845 59.15 atmosphere 1015 43200 > th dose independent rect. 16 5
859 59.15 humidity 70 43200 < th dose dependent rect. 20 5