BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0915800 Os01g0915800|AK103859
(158 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25220.1 | chr3:9182691-9184463 FORWARD LENGTH=154 217 2e-57
AT5G48580.1 | chr5:19696156-19697304 REVERSE LENGTH=164 216 4e-57
AT3G25230.2 | chr3:9188257-9191175 FORWARD LENGTH=563 116 4e-27
AT5G48570.1 | chr5:19690746-19693656 REVERSE LENGTH=579 113 3e-26
AT5G45680.1 | chr5:18530894-18532128 FORWARD LENGTH=209 98 2e-21
AT4G25340.1 | chr4:12959657-12962632 REVERSE LENGTH=478 86 1e-17
AT4G39710.1 | chr4:18427249-18428325 REVERSE LENGTH=218 81 3e-16
AT3G55520.1 | chr3:20594177-20595128 FORWARD LENGTH=191 79 1e-15
AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144 77 4e-15
AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500 72 1e-13
AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224 69 1e-12
AT5G64350.1 | chr5:25734810-25735990 REVERSE LENGTH=113 60 6e-10
AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230 56 8e-09
AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231 55 1e-08
AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257 47 5e-06
AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243 46 1e-05
>AT3G25220.1 | chr3:9182691-9184463 FORWARD LENGTH=154
Length = 153
Score = 217 bits (553), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 29 ASAKKSGDVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFT 88
A AKKSGDVTELQIGVKYKP+ C LQAHKGDKIKVHYRG LTDG+VFDSS++RGDP EF
Sbjct: 23 AYAKKSGDVTELQIGVKYKPQKCDLQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFE 82
Query: 89 LGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAVNGK 148
LG GQVI GWDQGLLG CVGEKRKLKIP+K+GYG+ GSPPKIPGGATLIFDTEL+AVNG+
Sbjct: 83 LGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVAVNGE 142
Query: 149 TTGGA-SNSEL 158
+ A S +EL
Sbjct: 143 PSSEAKSKNEL 153
>AT5G48580.1 | chr5:19696156-19697304 REVERSE LENGTH=164
Length = 163
Score = 216 bits (550), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 114/126 (90%)
Query: 27 LTASAKKSGDVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFE 86
L AKK+GDV+ELQIGVK+KP++C +QAHKGD IKVHYRG LTDG+VFDSS++RGDPFE
Sbjct: 21 LQGFAKKTGDVSELQIGVKFKPKTCEVQAHKGDTIKVHYRGKLTDGTVFDSSFERGDPFE 80
Query: 87 FTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAVN 146
F LG+GQVIKGWDQGLLG CVGEKRKLKIPAK+GYGE+GSPP IPGGATLIFDTELIAVN
Sbjct: 81 FKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELIAVN 140
Query: 147 GKTTGG 152
K GG
Sbjct: 141 EKPAGG 146
>AT3G25230.2 | chr3:9188257-9191175 FORWARD LENGTH=563
Length = 562
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 77/125 (61%), Gaps = 17/125 (13%)
Query: 29 ASAKKSGDVTELQIGVKYK----------PESCTLQAHKGDKIKVHYRGSLTDGSVFDSS 78
AS K G+ E+Q G+K K PE+ GD+++VHY G+L DG+ FDSS
Sbjct: 25 ASFLKVGEEKEIQQGLKKKLLKEGEGYETPEN-------GDEVEVHYTGTLLDGTKFDSS 77
Query: 79 YDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIF 138
DR PF+FTLG GQVIKGWD G+ M GE IPA++ YGE GSPP IP ATL F
Sbjct: 78 RDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQF 137
Query: 139 DTELI 143
D EL+
Sbjct: 138 DVELL 142
>AT5G48570.1 | chr5:19690746-19693656 REVERSE LENGTH=579
Length = 578
Score = 113 bits (283), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 62/87 (71%)
Query: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
GD+++VHY G+L DG+ FDSS DRG PF+FTLG G VIKGWD G+ M GE IP
Sbjct: 65 GDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKGWDLGIKTMKKGENAIFTIPP 124
Query: 118 KMGYGERGSPPKIPGGATLIFDTELIA 144
++ YGE GSPP IP ATL FD ELIA
Sbjct: 125 ELAYGETGSPPTIPPNATLQFDVELIA 151
>AT5G45680.1 | chr5:18530894-18532128 FORWARD LENGTH=209
Length = 208
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 67/111 (60%), Gaps = 16/111 (14%)
Query: 44 VKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLL 103
V Y PE A KG IK HY G L +G VFDSSY+RG P F +G G+VIKGWDQG+L
Sbjct: 100 VGYGPE-----AVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGIL 154
Query: 104 G------MCVGEKRKLKIPAKMGYGERGSPPK-----IPGGATLIFDTELI 143
G M G KR L+IP ++ YG+RG+ K IP + L+FD E I
Sbjct: 155 GSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205
>AT4G25340.1 | chr4:12959657-12962632 REVERSE LENGTH=478
Length = 477
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 54 QAHKGDKIKVHYRGSLT-DGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRK 112
+A G + V Y G L +G +FDS+ + PF+F LG G VIKGWD G+ GM VG+KRK
Sbjct: 385 RADPGKTVSVRYIGKLQKNGKIFDSNIGKS-PFKFRLGIGSVIKGWDVGVNGMRVGDKRK 443
Query: 113 LKIPAKMGYGERGSPPKIPGGATLIFDTELIAV 145
L IP MGYG +G+ +IP + L FD ELI V
Sbjct: 444 LTIPPSMGYGVKGAGGQIPPNSWLTFDVELINV 476
>AT4G39710.1 | chr4:18427249-18428325 REVERSE LENGTH=218
Length = 217
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 54 QAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLG------MCV 107
+A +G + +HY DG++FDSSY R P +G G+VI+G DQG+LG M V
Sbjct: 108 EAPRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRV 167
Query: 108 GEKRKLKIPAKMGYGERGS-----PPKIPGGATLIFDTELIAV 145
G KRKL+IP K+ YG + IPG ATL++D + +
Sbjct: 168 GGKRKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVEI 210
>AT3G55520.1 | chr3:20594177-20595128 FORWARD LENGTH=191
Length = 190
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 61 IKVHYRGSLT-DGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKM 119
+ VHY G L D VFD++ + F F LG G VI+ WD L M VGE K+ +
Sbjct: 35 VDVHYEGILAEDEKVFDTTREDNLVFSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEY 94
Query: 120 GYGERGSPPKIPGGATLIFDTELIAV---NGKTTGGASN 155
YG GSPP IP ATLIF+ EL+A G + G S
Sbjct: 95 AYGRAGSPPDIPPDATLIFEVELVACRPRKGASVGSVSE 133
>AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144
Length = 143
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 54 QAHKGDKIKVHYRGSLT-DGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRK 112
+A G ++ VHY G L +G +FDS+ + ++F L G+VIKG D GL GM VG KRK
Sbjct: 52 KAEPGKRVSVHYTGKLQGNGKIFDSTVGKSR-YKFRLDAGKVIKGLDVGLNGMLVGGKRK 110
Query: 113 LKIPAKMGYGERGSPPKIPGGATLIFDTELIAV 145
L IP +MGYG G+ IP + L+FD EL+ V
Sbjct: 111 LTIPPEMGYGAEGA-GSIPPDSWLVFDVELLNV 142
>AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500
Length = 499
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 55 AHKGDKIKVHYRGSLTD-GSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKL 113
A KG K+ + Y G L D G++FDS+ DP F LG VI+G G+ GM VG+KR+L
Sbjct: 408 AVKGKKVSILYTGKLKDTGNLFDSNLGE-DPLRFRLGGENVIEGLSIGVEGMRVGDKRRL 466
Query: 114 KIPAKMGYGERGSPPKIPGGATLIFDTELIAV 145
IP +GY +RG K+P A L+++ E + +
Sbjct: 467 IIPPALGYSKRGLKEKVPKSAWLVYEVEAVKI 498
>AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224
Length = 223
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
G ++ +Y + G +FDSS ++G P+ F +G+GQVIKG D+G+L M G KR+L IP
Sbjct: 124 GFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPG 183
Query: 118 KMGY--GERGSP--PKIPGGATLIFDTELIAVNG 147
+ + G +P P++ + +IFD L + G
Sbjct: 184 PLAFPKGLVSAPGRPRVAPNSPVIFDVSLEFIPG 217
>AT5G64350.1 | chr5:25734810-25735990 REVERSE LENGTH=113
Length = 112
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 58 GDKIKVHYRGSLTDGSV---FDSSYDRGD-PFEFTLGNGQVIKGWDQGLLGMCVGEKRKL 113
G + VH G DG + F S+ D G PF F +G G VIKGWD+G++GM +GE +L
Sbjct: 19 GQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVIKGWDEGVIGMQIGEVARL 78
Query: 114 KIPAKMGYGERGSPPK-IPGGATLIFDTELIAVN 146
+ + YG G P I + L F+ E+++V
Sbjct: 79 RCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLSVQ 112
>AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230
Length = 229
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 57 KGDKIKVHYRGSLT--DGSVFDSSYDRGD------PFEFTLGNGQVIKGWDQGLLGMCVG 108
+GD+I++HY G L G FDS+YD D PF F LG+ +VI G + + M VG
Sbjct: 104 EGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSSKVIPGIETAVRSMKVG 163
Query: 109 EKRKLKIPAKMGYGERGSPPKIPG 132
R++ IP GY P P
Sbjct: 164 GIRRVVIPPSQGYQNTSQEPLPPN 187
>AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231
Length = 230
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 27 LTASAKKSGDVTELQIGVKYKPESCT--LQAHKGDKIKVHYRGSLTDGSVFDSSYDR--- 81
L AS D T L G+KY +A KG ++ VHY G F +S
Sbjct: 90 LRASKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKW-KGITFMTSRQGLGV 148
Query: 82 --GDPFEFTLGN---GQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATL 136
G P+ F +G G V+KG D G+ GM VG +R + +P ++ YG++G +IP AT+
Sbjct: 149 GGGTPYGFDVGQSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGV-QEIPPNATI 207
Query: 137 IFDTELIAV 145
D EL+++
Sbjct: 208 ELDIELLSI 216
>AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257
Length = 256
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 33/146 (22%)
Query: 33 KSGDVTELQIGVKYKPESCTLQ--AHKGDKIKVHYRGSLTD--GSVFDS-------SYDR 81
K D TE Q G++YK A KGDK+ V + G G +F++ S++
Sbjct: 108 KYPDYTETQSGLQYKDLRVGTGPIAKKGDKVVVDWDGYTIGYYGRIFEARNKTKGGSFEG 167
Query: 82 GDP--FEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGER-----GSPPKIPGGA 134
D F+FTLG+ +VI +++ + GM +G R++ +P ++GY + G P G
Sbjct: 168 DDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMTFSGQ 227
Query: 135 ---------------TLIFDTELIAV 145
TL+FD EL+ +
Sbjct: 228 RALDFVLRNQGLIDKTLLFDVELLKI 253
>AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243
Length = 242
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
G ++ HY G G DS+Y +G P +G ++ G++ G+ M G +R++ IP
Sbjct: 138 GQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFEMGIRDMKPGGRRRIIIPP 197
Query: 118 KMGYGERGSPPKIPGGATL-------IFDTELIAVNG 147
++G PP G +T +FD EL+++
Sbjct: 198 ELG------PPV--GPSTFFSSKQFEVFDVELLSIQN 226
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,452,564
Number of extensions: 149426
Number of successful extensions: 202
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 199
Number of HSP's successfully gapped: 16
Length of query: 158
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 68
Effective length of database: 8,639,129
Effective search space: 587460772
Effective search space used: 587460772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 107 (45.8 bits)