Os02g0751600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidylprolyl isomerase, FKBP-type domain containing protein.
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Os02g0751600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidylprolyl isomerase, FKBP-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.43 | 0.485 | 12.6 | -1.14 | 2.96 | 1.9 | -0.321 | -0.201 | -0.954 | 22.5 | 25.62 | 365 | 21.6 | -- |
| 106.19 | 0.48 | 12.6 | -1.1 | 2.98 | 1.9 | -0.319 | -- | -0.958 | 22.4 | 25.6 | 377 | 22.4 | -- |
| 106.61 | 0.481 | 12.6 | -1.11 | 2.98 | 1.95 | -- | -0.0292 | -0.972 | 22.5 | 25.6 | 374 | 22.2 | -- |
| 106.55 | 0.481 | 12.6 | -1.09 | 3 | 1.93 | -- | -- | -0.955 | 22.4 | 25.63 | 372 | 22.3 | -- |
| 178.05 | 0.625 | 12.5 | -0.766 | -- | -2.67 | -- | 0.705 | -0.612 | -- | 13.69 | 2876 | 21.1 | -- |
| 175.1 | 0.62 | 12.5 | -0.796 | 2.66 | -- | -0.678 | -- | -0.619 | 21.2 | -- | -- | -- | -- |
| 176.74 | 0.623 | 12.5 | -0.771 | 2.66 | -- | -- | -- | -0.618 | 21.2 | -- | -- | -- | -- |
| 176.88 | 0.622 | 12.5 | -0.769 | -- | -2.66 | -- | -- | -0.617 | -- | 7.3 | 47520 | 20.9 | -- |
| 137.21 | 0.546 | 12.6 | -- | 3.02 | 1.8 | -- | -- | -0.851 | 22.1 | 25.7 | 364 | 22.7 | -- |
| 587.96 | 1.13 | 12.5 | -0.761 | -- | -- | -- | -- | -0.63 | -- | -- | -- | -- | -- |
| 192.42 | 0.649 | 12.5 | -- | 2.66 | -- | -- | -- | -0.532 | 21.2 | -- | -- | -- | -- |
| 192.42 | 0.646 | 12.4 | -- | -- | -2.66 | -- | -- | -0.532 | -- | 2.962 | 47520 | 20.8 | -- |
| 603.23 | 1.15 | 12.4 | -- | -- | -- | -- | -- | -0.546 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.07 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 2 | 100.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 3 | 101.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 7 | 102.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 11 |
| 24 | 105.89 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 9 |
| 38 | 107.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 40 | 107.25 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 45 | 107.42 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 10 |
| 50 | 108.02 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 53 | 108.38 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 16 |
| 93 | 111.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 115 | 113.03 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 18 |
| 121 | 113.17 | temperature | 25 | 270 | > th | dose independent | sin | 1 | NA |
| 127 | 113.49 | temperature | 25 | 270 | < th | dose independent | sin | 1 | NA |
| 292 | 117.85 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 354 | 119.13 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 393 | 119.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 614 | 122.64 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 4 |
| 643 | 122.90 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 653 | 123.04 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 9 |
| 829 | 124.50 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 999 | 126.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 9 |