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Os04g0446500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (FKBP-13) (FKBP-15).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.22 (0.0294) R2 : 0.624
β1 : 0.725 (0.108) R2dD : 0.0389 R2D : 0.0329
β2 : 2 (0.0751) R2dC : 0.587 R2C : 0.58
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0789 (0.0628) R2dN8 : 0.00175 R2N8 : 0.00503
σ : 0.553
deviance : 139.3
__
_____
C
peak time of C : 16.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
124.65 0.525 9.23 0.695 1.8 0.9 0.874 0.506 -0.0794 17 6.866 10 -- --
125.03 0.525 9.23 0.701 1.81 0.886 0.939 -- -0.0792 16.9 5.95 10 -- --
126.5 0.524 9.23 0.692 1.81 0.881 -- 0.69 -0.0762 16.9 6.59 9 -- --
127.29 0.529 9.23 0.704 1.82 0.877 -- -- -0.0746 16.9 5.82 10 -- --
208.36 0.672 9.24 0.606 -- 2 -- 0.721 -0.263 -- -2.641 378 -- --
137.28 0.549 9.23 0.716 1.99 -- 0.849 -- -0.0836 16.2 -- -- -- --
139.3 0.553 9.22 0.725 2 -- -- -- -0.0789 16.2 -- -- -- --
209.29 0.674 9.24 0.593 -- 2 -- -- -0.271 -- -3.685 384 -- --
140.36 0.555 9.25 -- 1.8 0.904 -- -- -0.153 16.9 5.82 10 -- --
355.84 0.881 9.21 0.644 -- -- -- -- -0.132 -- -- -- -- --
153.15 0.579 9.24 -- 1.99 -- -- -- -0.16 16.2 -- -- -- --
218.54 0.689 9.26 -- -- 2.01 -- -- -0.338 -- -4.336 386 -- --
366.79 0.894 9.23 -- -- -- -- -- -0.204 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.39 wind 5.0 90 < th dose independent rect. 3 5
2 109.37 atmosphere 1000.0 270 > th dose independent rect. 19 7
3 109.52 wind 5.0 270 < th dose independent rect. 3 2
4 109.52 precipitation 0.1 90 < th dose independent rect. 3 5
5 109.52 precipitation 0.1 90 < th dose dependent rect. 3 5
6 109.76 wind 5.0 270 < th dose independent rect. 1 6
7 109.82 wind 9.0 90 < th dose independent rect. 8 19
10 110.10 temperature 10.0 90 > th dose independent rect. 3 5
12 110.10 temperature 30.0 90 < th dose independent rect. 3 5
13 110.10 humidity 50.0 90 > th dose independent rect. 3 5
15 110.10 atmosphere 995.0 90 > th dose independent rect. 3 5
16 110.10 atmosphere 1015.0 90 < th dose independent rect. 3 5
17 110.10 temperature 10.0 90 > th dose independent rect. 8 19
19 110.22 radiation 40.0 90 < th dose independent rect. 3 5
20 110.43 temperature 15.0 90 > th dose independent rect. 15 17
21 110.65 temperature 10.0 90 > th dose dependent rect. 3 5
22 110.76 temperature 10.0 90 > th dose dependent rect. 8 6
26 110.83 precipitation 0.1 270 < th dose independent rect. 3 2
28 110.83 precipitation 0.1 270 < th dose dependent rect. 3 2
29 110.88 wind 9.0 90 < th dose dependent rect. 3 5
31 111.04 precipitation 0.1 90 < th dose independent rect. 8 19
32 111.04 precipitation 0.1 90 < th dose dependent rect. 8 19
33 111.18 radiation 20.0 270 < th dose independent rect. 1 7
38 111.44 atmosphere 995.0 90 > th dose independent rect. 8 19
40 111.45 wind 9.0 270 < th dose independent rect. 5 22
41 111.54 precipitation 0.1 90 < th dose independent rect. 8 7
42 111.54 precipitation 0.1 90 < th dose dependent rect. 8 7
43 111.60 wind 1.0 270 > th dose independent rect. 3 2
46 111.64 temperature 10.0 270 > th dose independent rect. 3 2
48 111.64 temperature 30.0 270 < th dose independent rect. 3 2
49 111.64 humidity 50.0 270 > th dose independent rect. 3 2
52 111.64 atmosphere 995.0 270 > th dose independent rect. 3 2
53 111.64 atmosphere 1010.0 270 < th dose independent rect. 3 2
55 111.64 radiation 20.0 270 < th dose independent rect. 3 2
58 111.64 temperature 10.0 270 > th dose independent rect. 5 22
60 111.65 temperature 10.0 90 > th dose dependent rect. 14 18
61 111.67 radiation 1.0 270 < th dose dependent rect. 3 2
62 111.68 radiation 40.0 270 < th dose dependent rect. 3 2
65 111.75 wind 9.0 90 < th dose independent rect. 8 7
66 111.76 wind 7.0 90 < th dose independent rect. 15 17
69 111.79 radiation 1.0 270 < th dose independent rect. 3 2
72 111.82 atmosphere 1015.0 90 < th dose independent rect. 15 17
75 111.86 temperature 10.0 90 > th dose independent rect. 8 7
76 111.86 atmosphere 1015.0 90 < th dose independent rect. 8 7
78 111.86 precipitation 0.1 90 < th dose independent rect. 15 17
79 111.86 radiation 30.0 270 < th dose dependent rect. 1 7
81 111.86 precipitation 0.1 90 < th dose dependent rect. 15 17
85 111.93 wind 9.0 270 < th dose dependent rect. 7 6
86 111.97 atmosphere 995.0 90 > th dose independent rect. 8 7
88 112.01 radiation 40.0 90 < th dose independent rect. 13 19
89 112.03 precipitation 0.1 270 < th dose independent rect. 1 6
90 112.03 precipitation 0.1 270 < th dose dependent rect. 1 6
91 112.08 humidity 50.0 90 > th dose independent rect. 8 19
95 112.12 radiation 40.0 90 < th dose independent rect. 15 17
98 112.19 temperature 10.0 10 > th dose dependent rect. 8 7
99 112.21 wind 9.0 270 < th dose dependent rect. 3 2
104 112.37 temperature 10.0 10 > th dose dependent rect. 15 17
122 112.53 temperature 10.0 270 > th dose dependent rect. 8 2
128 112.60 temperature 10.0 270 > th dose independent rect. 1 6
130 112.60 temperature 30.0 270 < th dose independent rect. 1 6
131 112.60 humidity 50.0 270 > th dose independent rect. 1 6
133 112.60 atmosphere 995.0 270 > th dose independent rect. 1 6
134 112.60 atmosphere 1015.0 270 < th dose independent rect. 1 6
140 112.61 radiation 1.0 90 > th dose independent rect. 8 7
153 112.70 precipitation 0.1 10 < th dose independent rect. 3 6
154 112.70 precipitation 0.1 10 < th dose dependent rect. 3 6
158 112.73 wind 1.0 90 > th dose independent rect. 8 7
172 112.80 atmosphere 1000.0 10 > th dose independent rect. 20 8
214 113.00 wind 9.0 270 < th dose dependent rect. 1 6
240 113.14 atmosphere 995.0 90 > th dose independent rect. 15 17
243 113.14 wind 9.0 270 < th dose dependent rect. 8 2
255 113.20 wind 9.0 10 < th dose independent rect. 9 19
264 113.23 humidity 90.0 90 < th dose independent rect. 8 7
265 113.23 atmosphere 1000.0 90 > th dose dependent rect. 3 5
268 113.26 humidity 50.0 270 > th dose dependent rect. 18 8
269 113.27 wind 1.0 270 > th dose independent rect. 1 6
294 113.35 precipitation 0.1 270 < th dose independent rect. 6 8
296 113.35 precipitation 0.1 270 < th dose dependent rect. 6 8
308 113.38 temperature 10.0 270 > th dose dependent rect. 3 2
312 113.39 wind 9.0 270 < th dose independent rect. 6 8
318 113.43 radiation 40.0 90 < th dose independent rect. 3 16
334 113.52 precipitation 0.1 270 < th dose independent rect. 2 16
337 113.52 precipitation 0.1 270 < th dose dependent rect. 2 16
346 113.56 humidity 50.0 270 > th dose independent rect. 6 21
351 113.60 temperature 10.0 10 > th dose independent rect. 4 5
353 113.60 temperature 30.0 10 < th dose independent rect. 4 5
354 113.60 humidity 50.0 10 > th dose independent rect. 4 5
356 113.60 atmosphere 995.0 10 > th dose independent rect. 4 5
357 113.60 atmosphere 1015.0 10 < th dose independent rect. 4 5
359 113.60 temperature 10.0 10 > th dose independent rect. 9 19
361 113.60 radiation 1.0 270 < th dose dependent rect. 18 8
362 113.61 temperature 10.0 270 > th dose dependent rect. 1 6
377 113.64 temperature 15.0 270 > th dose independent rect. 6 8
381 113.65 atmosphere 995.0 270 > th dose independent rect. 6 8
382 113.65 atmosphere 1015.0 270 < th dose independent rect. 6 8
383 113.65 radiation 30.0 90 < th dose independent rect. 3 8
388 113.67 humidity 50.0 90 > th dose independent rect. 8 7
406 113.73 radiation 1.0 270 < th dose independent rect. 18 8
410 113.75 humidity 50.0 270 > th dose dependent rect. 3 2
417 113.79 radiation 40.0 10 < th dose independent rect. 4 16
420 113.80 precipitation 0.1 10 < th dose independent rect. 9 18
421 113.80 precipitation 0.1 10 < th dose dependent rect. 9 18
443 113.85 radiation 1.0 10 > th dose independent rect. 8 7
461 113.87 wind 9.0 10 < th dose dependent rect. 4 5
463 113.88 wind 9.0 10 < th dose independent rect. 8 7
499 113.93 precipitation 0.1 10 < th dose independent rect. 15 17
501 113.93 atmosphere 995.0 270 > th dose dependent rect. 19 7
502 113.93 precipitation 0.1 10 < th dose dependent rect. 15 17
538 114.01 humidity 60.0 270 > th dose independent rect. 18 8
575 114.04 temperature 10.0 1440 > th dose independent rect. 9 7
579 114.04 temperature 10.0 1440 > th dose independent rect. 16 17
589 114.06 temperature 30.0 270 < th dose independent rect. 18 8
605 114.13 wind 5.0 270 < th dose independent rect. 8 2
614 114.15 radiation 40.0 10 < th dose independent rect. 4 4
668 114.29 temperature 10.0 270 > th dose independent rect. 18 8
673 114.29 temperature 10.0 270 > th dose independent rect. 2 16
674 114.29 atmosphere 1015.0 270 < th dose independent rect. 2 16
680 114.31 wind 9.0 270 < th dose independent rect. 18 8
697 114.38 humidity 50.0 270 > th dose independent rect. 6 8
703 114.38 atmosphere 995.0 10 > th dose independent rect. 8 20
707 114.39 radiation 1.0 270 < th dose dependent rect. 3 9
751 114.53 precipitation 0.1 270 < th dose independent rect. 5 22
753 114.53 precipitation 0.1 270 < th dose dependent rect. 5 22
755 114.54 precipitation 0.1 270 < th dose independent rect. 10 22
757 114.54 precipitation 0.1 270 < th dose dependent rect. 10 22
784 114.62 radiation 1.0 270 > th dose independent rect. 8 2
858 114.75 wind 9.0 90 < th dose dependent rect. 15 17
888 114.81 temperature 15.0 270 > th dose independent rect. 9 1
913 114.89 atmosphere 1000.0 10 > th dose dependent rect. 4 4
920 114.92 atmosphere 1000.0 270 > th dose dependent rect. 3 2
923 114.93 atmosphere 1010.0 270 < th dose independent rect. 12 9
941 114.96 radiation 40.0 10 < th dose independent rect. 12 20
952 114.98 precipitation 0.1 270 < th dose independent rect. 9 1
953 114.98 wind 9.0 270 < th dose independent rect. 2 16
954 114.98 precipitation 0.1 270 < th dose dependent rect. 9 1
957 115.00 radiation 1.0 270 < th dose dependent rect. 12 14
960 115.01 humidity 50.0 90 > th dose dependent rect. 3 5
966 115.03 humidity 50.0 270 > th dose independent rect. 9 1
970 115.03 radiation 40.0 90 < th dose dependent rect. 3 16
990 115.05 atmosphere 995.0 10 > th dose dependent rect. 20 8