BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0897700 Os01g0897700|AK061290
(244 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0897700 Similar to FH protein NFH1 449 e-127
Os09g0517600 Similar to FH protein NFH1 237 7e-63
Os03g0204100 Actin-binding FH2 domain containing protein 202 1e-52
Os10g0347800 Actin-binding FH2 domain containing protein 189 1e-48
Os07g0588200 Actin-binding FH2 domain containing protein 175 3e-44
Os07g0545500 Similar to VMP4 protein 141 5e-34
Os02g0161100 Actin-binding FH2 domain containing protein 135 4e-32
Os08g0431200 Actin-binding FH2 domain containing protein 131 4e-31
Os04g0461800 Actin-binding FH2 domain containing protein 123 1e-28
Os04g0100300 Actin-binding FH2 domain containing protein 122 2e-28
Os02g0739100 Actin-binding FH2 domain containing protein 115 4e-26
>Os01g0897700 Similar to FH protein NFH1
Length = 244
Score = 449 bits (1155), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/231 (94%), Positives = 219/231 (94%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RGDAHAF GTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD
Sbjct: 1 RGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR
Sbjct: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV
Sbjct: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
Query: 181 RDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQLFPRIHALRAGI 231
RDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQLFPRIHALRAGI
Sbjct: 181 RDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQLFPRIHALRAGI 231
>Os09g0517600 Similar to FH protein NFH1
Length = 788
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 159/214 (74%), Gaps = 3/214 (1%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RG+A AF G DGKTTLLHFV++EI+++EG+ + A+ Q++ Q + + D
Sbjct: 558 RGNASAFKLDALLKLVDVKGADGKTTLLHFVIEEIVKSEGASILATGQTS--NQGSAIAD 615
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
+ +CKK+GL++VA LG EL NVKKAA MDSD L+S V+KL+ G+ KI+E L+LN+++ S
Sbjct: 616 DFQCKKVGLRIVASLGGELGNVKKAAGMDSDTLASCVAKLSAGVSKISEALQLNQQLGSD 675
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
+ RF S+ +FL++A+ +I VQAQES+ALSLV+E TE+FHGDS KEE HP RIFMVV
Sbjct: 676 DHCKRFRASIGEFLQKAEAEITAVQAQESLALSLVRETTEFFHGDSVKEEGHPLRIFMVV 735
Query: 181 RDFLSVLDQVCKEVGRINDRT-IASSVRHFPVPV 213
RDFL+VLD VCK+VGR+N+RT I SS+R PV
Sbjct: 736 RDFLTVLDHVCKDVGRMNERTAIGSSLRLENAPV 769
>Os03g0204100 Actin-binding FH2 domain containing protein
Length = 892
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 142/222 (63%), Gaps = 13/222 (5%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RG+A AF GTDGKTTLLHFVVQEIIR+E + + ++ +
Sbjct: 664 RGEAKAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEDAKSEKESAMISSSKDD---- 719
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
+K GL+VV+GL +EL NVKKAA MD DVL YV+KL G+EKI VL+L ++
Sbjct: 720 ----RKHGLKVVSGLSSELGNVKKAATMDFDVLHGYVNKLETGLEKIKSVLQLEKKCTQ- 774
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
RF SMQ FLK A+ +I RV+ +E AL VK+ITEYFHGD+AKEEAHP RIFMVV
Sbjct: 775 --GQRFFMSMQDFLKEAEREIERVRGEERRALGRVKDITEYFHGDTAKEEAHPLRIFMVV 832
Query: 181 RDFLSVLDQVCKEVGRI-NDRT-IASSVRHFPVPVNPMMPQL 220
RDFLS LDQVC+EVGR+ DRT I S R F + +P L
Sbjct: 833 RDFLSTLDQVCREVGRMQQDRTVIGGSARSFRISATSSLPVL 874
>Os10g0347800 Actin-binding FH2 domain containing protein
Length = 849
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 135/220 (61%), Gaps = 8/220 (3%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RG+A AF G DGKTTLLHFVVQEI+R+E A ++ P +
Sbjct: 618 RGEAKAFKLDTLLKLADVKGADGKTTLLHFVVQEIVRSE----DAKSEKAPENHITNIAK 673
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
+ ++ GL+VV+GL EL NVK+AA MD DVL YVSKL G+ KI VL+L ++
Sbjct: 674 VEQLRRQGLKVVSGLSTELGNVKRAATMDFDVLHGYVSKLEAGLGKIKSVLQLEKQCSQ- 732
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
F +M++FLK A+ +I +V+ E AL VKEITEYFHG++ KEEAHP RIFMVV
Sbjct: 733 --GVNFFATMREFLKEAEQEIEQVRHDEKAALGRVKEITEYFHGNAVKEEAHPLRIFMVV 790
Query: 181 RDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQL 220
RDFLS+LD VC+EV + DRT S R F + +P L
Sbjct: 791 RDFLSMLDHVCREVSQ-QDRTFVGSARSFRISAANALPIL 829
>Os07g0588200 Actin-binding FH2 domain containing protein
Length = 774
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 135/220 (61%), Gaps = 10/220 (4%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEG--SHLSASNQSTPRTQANPL 58
RG+A AF TDG+TTLLHFVV+EIIR+EG S SA N + +
Sbjct: 543 RGEARAFKLDTLLKLADIKSTDGRTTLLHFVVKEIIRSEGFDSDQSAVNPGSGSKE---- 598
Query: 59 RDELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVK 118
+ K+ GL+++AGL +ELSNVK+AA ++ D LS + +L +EK+ VL+L E
Sbjct: 599 ----QFKRDGLKLLAGLSSELSNVKRAATLEMDTLSGNILRLEADLEKVKLVLQLKETCS 654
Query: 119 SREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFM 178
+ + F +M FL+RA+ +I ++ E AL LVKE TEYFHGD+ KEE HP RIF+
Sbjct: 655 DQGASENFFQAMVVFLRRAEAEIKNMKTAEENALRLVKETTEYFHGDATKEEPHPLRIFV 714
Query: 179 VVRDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMP 218
VV +FL +LD+VC++VGR +R + S + F VP +P
Sbjct: 715 VVDEFLLILDRVCRDVGRTPERVMMGSGKSFRVPAGTSLP 754
>Os07g0545500 Similar to VMP4 protein
Length = 929
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 137/247 (55%), Gaps = 27/247 (10%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSAS----NQSTPRTQAN 56
RG A AF GTDGKTTLLHFVVQEIIR+EG + N + +
Sbjct: 681 RGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRAERAAKEQNSGVSSVKTD 740
Query: 57 PLRDELE-----CKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVL 111
L D+ E K+LGL+V++ LG+EL +V+KAA +D+D L+ V+ L + K E
Sbjct: 741 DLGDKSEQTEDGYKQLGLKVISSLGDELQDVRKAAILDADQLTMSVASLGHKLMKTNEF- 799
Query: 112 RLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEA 171
LN ++KS ++ FH + F++++ DI + +E LVK+ +YFHG + K+E
Sbjct: 800 -LNMDMKSLDEDSGFHRKLTHFVQQSQTDITFLLEEEKKMRLLVKDTVDYFHGSAGKDEG 858
Query: 172 HPFRIFMVVRDFLSVLDQVCKEVG--------RINDRTIASSVRHFPVP-VNPMMPQLFP 222
R+F++VRDFL++LD+VCKEV + + + S++ F P VN LFP
Sbjct: 859 --LRLFVIVRDFLAMLDKVCKEVKEASKVAPVKAKAKQPSQSLQSFRDPRVN-----LFP 911
Query: 223 RIHALRA 229
I LRA
Sbjct: 912 AIQHLRA 918
>Os02g0161100 Actin-binding FH2 domain containing protein
Length = 881
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 120/206 (58%), Gaps = 15/206 (7%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEG---SHLSASNQST---PRTQ 54
RG A+AF G DGKTTLLHFVVQEIIR+EG + L+ N + P T
Sbjct: 635 RGGANAFKLDTLLKLSDVKGADGKTTLLHFVVQEIIRSEGVREARLAMENGRSPPFPSTS 694
Query: 55 ANPLRDELE-----CKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITE 109
+ + L+ LGL++V+GL NEL NVK+ AA+D+D LS+ V+ L + + E
Sbjct: 695 DDNSNESLQEDGNYYSNLGLKIVSGLSNELDNVKRVAALDADALSTSVANLRHELLRAKE 754
Query: 110 VLRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKE 169
LN ++ S E+ FH S++ F++ A+ + + ++ LVK YFHG+ K+
Sbjct: 755 F--LNSDMASLEENSGFHRSLESFIEHAETETNFLLKEDKRLRMLVKRTIRYFHGNDEKD 812
Query: 170 EAHPFRIFMVVRDFLSVLDQVCKEVG 195
+ FR+F++VRDFL +LD+ CKEVG
Sbjct: 813 DG--FRLFVIVRDFLVMLDKACKEVG 836
>Os08g0431200 Actin-binding FH2 domain containing protein
Length = 882
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RG A AF GTDGKTTLLHFVV+E+ R++G TP + + +
Sbjct: 675 RGGASAFKLDALLKLADIRGTDGKTTLLHFVVKEMARSKGLKALEKLNETPSSCHDTPTE 734
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
E +G + V+ L NEL NVKK A++D D L + +S L+ G+ ++ ++ +++ S
Sbjct: 735 REEYSSMGTEFVSELSNELGNVKKVASIDLDTLRNSISNLSCGLAQLRNLVE--KDLASD 792
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
+ F M+ FL A++ + ++A E+ L V+E+TEY+HG+ +K+E++ +IF++V
Sbjct: 793 DKNNNFLQCMKSFLNHAENTMQGLKADEAQVLLNVRELTEYYHGEVSKDESNLLQIFIIV 852
Query: 181 RDFLSVLDQVCKEV-GRINDRTI 202
+DFL +LD+VC+E+ G +++T+
Sbjct: 853 KDFLGLLDKVCREMRGTKHNQTL 875
>Os04g0461800 Actin-binding FH2 domain containing protein
Length = 833
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 104/194 (53%), Gaps = 27/194 (13%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RG A AF GTDGKTTLLHFVVQE+ R+ + +
Sbjct: 649 RGGAMAFKLDALLKLADVKGTDGKTTLLHFVVQEMTRSRAAEAADIAA------------ 696
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
GLG EL+NV+K A +D DVL++ VS L+ G+ +I E++ ++
Sbjct: 697 -------------GLGAELTNVRKTATVDLDVLTTSVSGLSHGLSRIKELV--GSDLSGD 741
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
E F M F+ A + I ++ E L+ V+EITEY+HGD K+EA P RIF++V
Sbjct: 742 ERNQCFVAFMAPFVAHAGEVIRELEDGERRVLAHVREITEYYHGDVGKDEASPLRIFVIV 801
Query: 181 RDFLSVLDQVCKEV 194
RDFL +L++VCKEV
Sbjct: 802 RDFLGMLERVCKEV 815
>Os04g0100300 Actin-binding FH2 domain containing protein
Length = 421
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 121/246 (49%), Gaps = 38/246 (15%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLS---------------- 44
RG A AF G DGKTTLLHFVVQEIIR+EG +
Sbjct: 139 RGGAQAFKLDTLLKLADVKGVDGKTTLLHFVVQEIIRSEGVRAARAASGGGGGSSISSIS 198
Query: 45 --------------ASNQSTPRTQANPL---RDELE-CKKLGLQVVAGLGNELSNVKKAA 86
SN A+ L +DE E ++LGL VV+ LG++L NV+KAA
Sbjct: 199 SSDDLILLQSQSSIGSNSGRSSVDASSLEQEQDETERYRQLGLGVVSSLGDDLQNVRKAA 258
Query: 87 AMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQA 146
+ D+D L+ V+ L + K E L+ ++S E+ F + F++++ + + R+
Sbjct: 259 SFDADALTITVASLGHRLVKANEF--LSTGMRSLEEDSGFQRRLASFVQQSQEQVTRLLE 316
Query: 147 QESVALSLVKEITEYFHGDSAKEEAHPFRIFMVVRDFLSVLDQVCKEVGRINDRTIASSV 206
E SLV+ +YFHG + K+E R+F+VVRDFL +LD+VC+EV +
Sbjct: 317 DEKRLRSLVRATVDYFHGSTGKDEG--LRLFVVVRDFLGILDKVCREVKEQAAANAKAKK 374
Query: 207 RHFPVP 212
+ P P
Sbjct: 375 QQQPTP 380
>Os02g0739100 Actin-binding FH2 domain containing protein
Length = 484
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 34/220 (15%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLS---------------- 44
RG+A AF TDG TTLLHFV++E++R+EG L+
Sbjct: 201 RGNAQAFNLTALRKLSDVKSTDGSTTLLHFVIEEVVRSEGKRLAINRNYSLRRSGSLAKS 260
Query: 45 --ASNQSTPRTQANPLRDEL--ECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKL 100
N + T P R+E E LGL +V GL E +NVKKAA +D D + + + L
Sbjct: 261 TDGGNPAASSTSQGPSREERQNEYLNLGLPIVGGLSTEFANVKKAALVDYDTVVNECAIL 320
Query: 101 A---GGIEKITEVLRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKE 157
G +K+ E +D F ++ F+K A+ ++ ++ + L LV+
Sbjct: 321 GNRLAGTKKLLETY--------GDDG--FARGLRGFVKAAEQELNELKGNQEKVLELVQR 370
Query: 158 ITEYFHGDSAKEE-AHPFRIFMVVRDFLSVLDQVCKEVGR 196
TEY+H + K++ AHP ++F++VRDFL ++DQ C ++ R
Sbjct: 371 TTEYYHTGATKDKNAHPLQLFIIVRDFLGMVDQACVDIKR 410
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,976,032
Number of extensions: 256944
Number of successful extensions: 719
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 698
Number of HSP's successfully gapped: 11
Length of query: 244
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 146
Effective length of database: 11,918,829
Effective search space: 1740149034
Effective search space used: 1740149034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)