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Os03g0204100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Actin-binding FH2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.45 (0.0335) R2 : 0.118
β1 : 0.933 (0.123) R2dD : 0.116 R2D : 0.0915
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.228 (0.0716) R2dN8 : 0.0263 R2N8 : 0.00188
σ : 0.629
deviance : 181.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
145.02 0.566 8.47 0.812 0.0623 0.784 2.07 -2.11 0.138 1.52 45.71 1311 -- --
150.28 0.571 8.46 0.993 0.0739 0.723 2 -- 0.172 1.57 45.76 1277 -- --
159.7 0.589 8.46 0.792 0.0878 0.767 -- -2.2 0.171 2.01 50.01 1396 -- --
165.44 0.599 8.47 0.894 0.0681 0.722 -- -- 0.153 2.73 44.37 1277 -- --
160.37 0.59 8.46 0.79 -- 0.777 -- -2.19 0.193 -- 50 1395 -- --
163.89 0.6 8.45 0.994 0.137 -- 2.02 -- 0.236 1.59 -- -- -- --
180.23 0.629 8.45 0.927 0.139 -- -- -- 0.225 1.99 -- -- -- --
165.56 0.599 8.47 0.914 -- 0.765 -- -- 0.155 -- 44.71 1277 -- --
186.1 0.635 8.47 -- 0.0474 0.724 -- -- 0.0407 3.34 39.99 1239 -- --
181.4 0.629 8.45 0.933 -- -- -- -- 0.228 -- -- -- -- --
202.89 0.666 8.48 -- 0.157 -- -- -- 0.122 2.14 -- -- -- --
186.01 0.635 8.5 -- -- 0.765 -- -- 0.013 -- 40 1277 -- --
204.36 0.667 8.47 -- -- -- -- -- 0.125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.47 wind 7 4320 < th dose independent rect. 15 1
2 137.87 wind 7 4320 > th dose independent rect. 15 1
9 139.83 wind 5 4320 > th dose dependent rect. 15 1
24 141.87 wind 5 4320 > th dose dependent rect. 15 4
40 142.67 radiation 10 1440 > th dose independent rect. 11 1
43 142.92 humidity 60 10 > th dose dependent rect. 6 22
44 142.97 radiation 1 1440 > th dose dependent rect. 11 1
58 143.74 humidity 90 4320 > th dose independent rect. 6 1
59 143.77 radiation 1 1440 < th dose independent rect. 10 2
60 143.77 radiation 40 1440 < th dose dependent rect. 11 1
61 143.77 radiation 1 1440 < th dose dependent rect. 10 2
66 144.01 radiation 20 1440 > th dose independent rect. 16 16
70 144.30 humidity 80 270 > th dose independent rect. 9 7
72 144.38 humidity 80 90 < th dose independent rect. 24 19
81 144.50 humidity 80 1440 < th dose independent rect. 2 11
82 144.51 humidity 80 1440 < th dose independent rect. 6 7
83 144.51 humidity 80 90 < th dose independent rect. 5 14
93 144.65 radiation 10 1440 > th dose independent rect. 15 21
112 145.01 radiation 20 1440 < th dose dependent rect. 15 2
113 145.03 humidity 80 1440 > th dose independent rect. 2 11
127 145.18 radiation 40 1440 < th dose independent rect. 11 1
134 145.30 humidity 80 1440 > th dose independent rect. 6 7
145 145.40 wind 1 14400 > th dose independent rect. 1 1
147 145.40 humidity 90 720 > th dose dependent rect. 11 2
149 145.42 humidity 70 10 > th dose dependent rect. 8 20
157 145.48 radiation 40 1440 > th dose dependent rect. 13 23
162 145.57 humidity 80 270 > th dose dependent rect. 9 8
170 145.74 atmosphere 1005 270 > th dose independent rect. 14 16
179 145.87 humidity 90 720 > th dose independent rect. 11 2
184 145.88 humidity 90 10 < th dose dependent rect. 15 21
198 146.01 radiation 30 4320 > th dose dependent rect. 7 1
223 146.13 wind 7 43200 > th dose dependent rect. 16 1
226 146.16 humidity 50 10 > th dose dependent rect. 19 23
229 146.23 radiation 10 1440 < th dose independent rect. 15 2
233 146.26 radiation 30 1440 > th dose independent rect. 11 1
234 146.26 humidity 80 10 > th dose dependent rect. 9 11
238 146.30 wind 1 14400 < th dose independent rect. 1 1
245 146.33 radiation 10 1440 > th dose dependent rect. 15 21
252 146.41 radiation 40 1440 < th dose dependent rect. 16 1
287 146.60 radiation 1 1440 > th dose dependent rect. 16 1
295 146.64 humidity 60 1440 < th dose independent rect. 16 19
304 146.69 humidity 60 10 > th dose dependent rect. 8 8
309 146.73 wind 3 4320 > th dose independent rect. 8 1
312 146.73 humidity 60 1440 > th dose independent rect. 15 20
318 146.77 radiation 10 1440 < th dose dependent sin 20 NA
319 146.77 radiation 40 1440 > th dose dependent rect. 15 21
325 146.81 radiation 30 4320 < th dose independent rect. 7 1
332 146.84 humidity 90 30 < th dose dependent rect. 13 23
334 146.85 radiation 40 1440 > th dose dependent rect. 8 4
352 146.86 radiation 10 1440 < th dose dependent rect. 8 10
355 146.88 radiation 20 1440 < th dose dependent rect. 15 13
365 146.91 radiation 20 1440 < th dose dependent rect. 15 10
376 146.96 radiation 20 1440 < th dose dependent rect. 15 6
379 146.97 radiation 20 1440 < th dose dependent rect. 15 8
383 146.99 radiation 30 4320 < th dose independent rect. 22 10
393 147.01 radiation 30 4320 < th dose independent rect. 20 12
400 147.04 temperature 20 270 > th dose dependent rect. 5 8
411 147.07 radiation 10 1440 < th dose dependent rect. 8 20
419 147.09 radiation 10 1440 < th dose dependent rect. 8 17
429 147.11 radiation 10 1440 < th dose dependent rect. 8 13
431 147.11 radiation 10 1440 < th dose dependent rect. 8 15
434 147.12 radiation 30 4320 < th dose independent rect. 24 8
436 147.12 temperature 25 270 > th dose dependent rect. 1 12
439 147.13 humidity 60 14400 > th dose independent rect. 4 4
447 147.14 humidity 80 30 > th dose independent rect. 8 12
461 147.18 humidity 90 10 < th dose dependent rect. 4 17
462 147.19 radiation 30 4320 < th dose independent rect. 2 6
475 147.22 wind 5 4320 > th dose independent rect. 18 1
478 147.23 radiation 1 720 < th dose independent rect. 8 16
513 147.29 radiation 40 1440 < th dose dependent rect. 15 21
535 147.41 radiation 10 1440 < th dose dependent rect. 13 5
543 147.42 humidity 60 1440 < th dose dependent rect. 15 21
556 147.45 humidity 80 90 < th dose independent rect. 9 10
564 147.47 atmosphere 1005 720 < th dose independent rect. 18 6
568 147.48 radiation 10 1440 < th dose dependent sin 15 NA
585 147.51 radiation 10 1440 < th dose dependent rect. 13 17
587 147.51 humidity 90 10 < th dose dependent rect. 24 21
599 147.53 humidity 90 10 < th dose dependent rect. 7 14
615 147.57 humidity 80 1440 < th dose dependent rect. 11 1
619 147.58 radiation 10 1440 < th dose dependent rect. 11 19
620 147.59 humidity 70 1440 > th dose independent rect. 11 1
624 147.60 radiation 20 1440 > th dose dependent rect. 7 5
661 147.64 radiation 40 1440 > th dose dependent sin 7 NA
687 147.69 radiation 1 1440 > th dose independent rect. 9 4
700 147.72 radiation 10 1440 < th dose dependent rect. 11 7
702 147.72 radiation 10 1440 < th dose dependent rect. 13 15
704 147.73 humidity 80 14400 > th dose independent rect. 22 2
716 147.75 radiation 10 1440 < th dose dependent rect. 13 12
718 147.76 humidity 50 1440 < th dose independent rect. 16 1
721 147.76 humidity 50 1440 < th dose dependent rect. 16 1
733 147.78 radiation 10 1440 < th dose dependent rect. 13 8
734 147.78 radiation 10 1440 < th dose dependent rect. 13 10
804 147.82 humidity 90 10 < th dose dependent rect. 11 23
809 147.84 humidity 70 30 < th dose independent rect. 15 21
821 147.86 wind 3 4320 < th dose independent rect. 8 1
832 147.88 humidity 50 10 > th dose dependent rect. 19 21
849 147.92 wind 9 43200 > th dose independent rect. 15 5
862 147.94 atmosphere 1000 30 > th dose independent rect. 4 15
868 147.94 radiation 10 1440 < th dose dependent rect. 11 14
878 147.96 radiation 10 1440 < th dose dependent rect. 11 10
880 147.96 radiation 10 1440 < th dose dependent rect. 11 12
910 148.02 humidity 60 1440 > th dose independent rect. 15 4
931 148.05 humidity 60 1440 > th dose independent sin 11 NA
938 148.06 humidity 60 1440 < th dose independent rect. 15 4
948 148.08 humidity 60 1440 < th dose independent sin 11 NA
949 148.08 humidity 80 1440 < th dose independent sin 5 NA
968 148.10 wind 5 4320 > th dose dependent sin 19 NA