Os07g0588200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Actin-binding FH2 domain containing protein.
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Os07g0588200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Actin-binding FH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.67 | 0.31 | 10.6 | 0.0941 | 1.64 | -0.912 | 0.225 | 0.529 | -0.13 | 7.08 | 0.9386 | 1491 | -- | -- |
| 43.85 | 0.308 | 10.6 | 0.139 | 1.64 | -0.964 | 0.167 | -- | -0.139 | 7.1 | 0.81 | 1487 | -- | -- |
| 43.79 | 0.308 | 10.6 | 0.0981 | 1.64 | -0.878 | -- | 0.621 | -0.131 | 7.05 | 1.09 | 1498 | -- | -- |
| 43.92 | 0.309 | 10.6 | 0.131 | 1.64 | -0.995 | -- | -- | -0.137 | 7.08 | 0.79 | 1489 | -- | -- |
| 171.7 | 0.614 | 10.7 | 0.355 | -- | -0.541 | -- | 0.395 | 0.00767 | -- | 1.09 | 1498 | -- | -- |
| 53.77 | 0.344 | 10.6 | 0.334 | 1.69 | -- | 0.118 | -- | -0.00594 | 7.34 | -- | -- | -- | -- |
| 53.81 | 0.344 | 10.6 | 0.337 | 1.69 | -- | -- | -- | -0.00613 | 7.35 | -- | -- | -- | -- |
| 171.51 | 0.613 | 10.7 | 0.348 | -- | -0.546 | -- | -- | 0.0154 | -- | 0.79 | 1489 | -- | -- |
| 44.29 | 0.31 | 10.6 | -- | 1.64 | -1.04 | -- | -- | -0.136 | 7.09 | 0.6605 | 1486 | -- | -- |
| 205.09 | 0.669 | 10.6 | 0.365 | -- | -- | -- | -- | 0.0218 | -- | -- | -- | -- | -- |
| 56.8 | 0.353 | 10.6 | -- | 1.69 | -- | -- | -- | -0.0436 | 7.33 | -- | -- | -- | -- |
| 174.7 | 0.618 | 10.7 | -- | -- | -0.549 | -- | -- | -0.0232 | -- | 0.79 | 1489 | -- | -- |
| 208.6 | 0.674 | 10.7 | -- | -- | -- | -- | -- | -0.0187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.54 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 2 | 43.57 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 3 | 43.57 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 4 | 43.58 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 21 |
| 22 | 43.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 28 | 43.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 53 | 43.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 55 | 43.95 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 59 | 43.96 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 16 |
| 66 | 43.99 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 67 | 43.99 | wind | 7 | 43200 | < th | dose independent | sin | 18 | NA |
| 112 | 44.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 124 | 44.09 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 156 | 44.17 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 164 | 44.17 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 174 | 44.19 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 6 |
| 181 | 44.21 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 186 | 44.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 188 | 44.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 18 |
| 193 | 44.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 203 | 44.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 249 | 44.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 15 |
| 251 | 44.25 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 265 | 44.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 303 | 44.27 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 306 | 44.28 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 342 | 44.30 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 358 | 44.31 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 359 | 44.31 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 371 | 44.32 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 374 | 44.32 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 385 | 44.32 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 394 | 44.33 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 425 | 44.36 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 426 | 44.36 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 477 | 44.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 487 | 44.38 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 511 | 44.42 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 546 | 44.47 | radiation | 1 | 1440 | > th | dose independent | sin | 23 | NA |
| 568 | 44.49 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 594 | 44.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 596 | 44.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 623 | 44.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 636 | 44.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 650 | 44.56 | radiation | 1 | 1440 | < th | dose dependent | sin | 15 | NA |
| 651 | 44.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 725 | 44.61 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 738 | 44.62 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 749 | 44.63 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 768 | 44.64 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 799 | 44.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 11 |