Os02g0739100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Actin-binding FH2 domain containing protein.
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Os02g0739100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Actin-binding FH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.63 | 0.644 | 7.87 | 0.335 | 1.13 | -1 | 0.34 | -0.931 | -0.103 | 16.7 | 62.03 | 4723 | -- | -- |
| 187.7 | 0.638 | 7.87 | 0.419 | 1.11 | -1.06 | 0.346 | -- | -0.0985 | 16.6 | 64.01 | 4732 | -- | -- |
| 187.88 | 0.638 | 7.87 | 0.334 | 1.13 | -0.987 | -- | -0.992 | -0.106 | 16.6 | 62.07 | 4723 | -- | -- |
| 188.01 | 0.639 | 7.87 | 0.412 | 1.11 | -1.06 | -- | -- | -0.0917 | 16.6 | 64 | 4720 | -- | -- |
| 251.8 | 0.739 | 7.86 | 0.37 | -- | -1.31 | -- | -0.474 | -0.122 | -- | 65 | 4791 | -- | -- |
| 207.95 | 0.676 | 7.91 | 0.346 | 1.2 | -- | 0.222 | -- | -0.277 | 16.7 | -- | -- | -- | -- |
| 208.06 | 0.675 | 7.91 | 0.348 | 1.2 | -- | -- | -- | -0.276 | 16.6 | -- | -- | -- | -- |
| 251.77 | 0.739 | 7.87 | 0.373 | -- | -1.34 | -- | -- | -0.174 | -- | 66.14 | 4796 | -- | -- |
| 192.18 | 0.646 | 7.87 | -- | 1.11 | -1.05 | -- | -- | -0.118 | 16.6 | 64.63 | 4720 | -- | -- |
| 284.28 | 0.788 | 7.9 | 0.302 | -- | -- | -- | -- | -0.308 | -- | -- | -- | -- | -- |
| 211.25 | 0.68 | 7.92 | -- | 1.19 | -- | -- | -- | -0.315 | 16.6 | -- | -- | -- | -- |
| 251.73 | 0.741 | 7.91 | -- | -- | -0.695 | -- | -- | -0.322 | -- | 68 | 4785 | -- | -- |
| 286.69 | 0.79 | 7.91 | -- | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.22 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 2 | 186.09 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 22 |
| 3 | 186.31 | humidity | 80 | 720 | < th | dose independent | rect. | 7 | 4 |
| 4 | 186.70 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 3 |
| 5 | 186.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 7 | 186.72 | humidity | 60 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 9 | 186.93 | humidity | 90 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 13 | 187.04 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 15 | 187.15 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 16 | 187.15 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 23 |
| 19 | 187.21 | humidity | 60 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 31 | 187.55 | humidity | 90 | 720 | < th | dose dependent | rect. | 6 | 5 |
| 35 | 187.64 | humidity | 80 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 36 | 187.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 39 | 187.67 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 17 | 10 |
| 41 | 187.71 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 43 | 187.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 51 | 187.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 57 | 187.92 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 65 | 188.05 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 17 | 14 |
| 69 | 188.09 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 70 | 188.10 | humidity | 90 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 74 | 188.12 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 9 |
| 85 | 188.17 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 10 |
| 86 | 188.18 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 97 | 188.23 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 118 | 188.35 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 120 | 188.36 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 124 | 188.38 | humidity | 60 | 4320 | > th | dose independent | rect. | 7 | 8 |
| 125 | 188.38 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 128 | 188.39 | humidity | 60 | 4320 | > th | dose independent | rect. | 3 | 12 |
| 131 | 188.39 | humidity | 60 | 4320 | > th | dose independent | rect. | 23 | 16 |
| 194 | 188.63 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 23 |
| 243 | 188.80 | humidity | 50 | 14400 | > th | dose dependent | sin | 23 | NA |
| 262 | 188.84 | humidity | 90 | 14400 | < th | dose dependent | sin | 22 | NA |
| 273 | 188.86 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 275 | 188.87 | wind | 9 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 287 | 188.88 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 298 | 188.92 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 14 |
| 299 | 188.92 | temperature | 20 | 30 | > th | dose independent | rect. | 1 | 16 |
| 300 | 188.92 | humidity | 60 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 318 | 188.93 | humidity | 60 | 4320 | > th | dose independent | rect. | 11 | 21 |
| 323 | 188.94 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 350 | 188.97 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 389 | 189.02 | wind | 3 | 720 | < th | dose independent | rect. | 8 | 1 |
| 392 | 189.02 | temperature | 20 | 30 | > th | dose independent | rect. | 23 | 18 |
| 398 | 189.04 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 3 |
| 408 | 189.05 | humidity | 90 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 463 | 189.11 | wind | 7 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 522 | 189.21 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 532 | 189.22 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 538 | 189.23 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 565 | 189.27 | radiation | 30 | 720 | > th | dose independent | rect. | 15 | 1 |
| 584 | 189.27 | humidity | 70 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 683 | 189.41 | temperature | 30 | 270 | < th | dose independent | sin | 17 | NA |
| 711 | 189.45 | humidity | 60 | 4320 | > th | dose independent | sin | 23 | NA |
| 734 | 189.47 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 15 | 3 |
| 735 | 189.47 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 19 |
| 770 | 189.52 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 17 | 14 |
| 798 | 189.55 | wind | 3 | 720 | < th | dose independent | rect. | 7 | 4 |
| 817 | 189.58 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 9 |
| 821 | 189.59 | humidity | 60 | 14400 | < th | dose independent | sin | 12 | NA |
| 833 | 189.60 | atmosphere | 995 | 30 | > th | dose independent | rect. | 9 | 7 |
| 840 | 189.61 | humidity | 60 | 14400 | > th | dose independent | sin | 12 | NA |
| 874 | 189.64 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 885 | 189.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 15 |
| 940 | 189.71 | humidity | 70 | 90 | > th | dose independent | sin | 12 | NA |
| 949 | 189.72 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 961 | 189.73 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 7 |
| 972 | 189.74 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 17 |