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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0431200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Actin-binding FH2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0342) R2 : 0.0423
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.324 (0.0721) R2dN8 : 0.0547 R2N8 : 0.0423
σ : 0.645
deviance : 190.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
168.36 0.61 2.99 -0.386 0.407 -0.441 -0.835 1.28 0.269 6.25 1.1 16 -- --
169.92 0.607 2.98 -0.326 0.425 -0.343 -0.956 -- 0.284 6.11 1.145 16 -- --
169.17 0.61 2.99 -0.413 0.429 -0.358 -- 1.64 0.276 6.29 1.121 16 -- --
172.13 0.611 2.97 -0.334 0.422 -0.337 -- -- 0.287 6.29 1.19 16 -- --
177.43 0.62 3 -0.452 -- -0.66 -- 1.89 0.273 -- 1.103 16 -- --
172.93 0.617 2.98 -0.282 0.522 -- -0.915 -- 0.278 5.88 -- -- -- --
174.98 0.619 2.97 -0.289 0.517 -- -- -- 0.281 5.92 -- -- -- --
179.04 0.626 2.98 -0.402 -- -0.319 -- -- 0.303 -- 2.821 13 -- --
175.02 0.616 2.97 -- 0.43 -0.291 -- -- 0.323 6.27 1.119 16 -- --
188.82 0.642 2.98 -0.274 -- -- -- -- 0.293 -- -- -- -- --
177.18 0.623 2.97 -- 0.512 -- -- -- 0.314 5.94 -- -- -- --
183.11 0.632 2.97 -- -- -0.277 -- -- 0.344 -- 2.821 13 -- --
190.8 0.645 2.98 -- -- -- -- -- 0.324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 161.68 temperature 30.0 90 < th dose dependent rect. 4 2
2 161.81 temperature 20.0 90 < th dose independent rect. 4 1
3 161.81 wind 1.0 90 > th dose independent rect. 6 22
4 161.88 temperature 15.0 10 > th dose independent rect. 6 23
6 162.16 wind 1.0 10 > th dose independent rect. 7 21
7 162.24 temperature 30.0 10 < th dose dependent rect. 5 1
10 162.39 wind 5.0 90 < th dose independent rect. 4 2
11 162.40 wind 5.0 10 < th dose dependent rect. 5 1
14 162.58 wind 3.0 10 < th dose independent rect. 5 1
22 162.72 wind 9.0 10 < th dose independent rect. 6 23
23 162.74 wind 1.0 10 > th dose independent rect. 18 10
30 162.87 atmosphere 1005.0 90 > th dose dependent rect. 1 5
32 162.91 radiation 1.0 10 < th dose dependent rect. 6 2
38 162.98 wind 9.0 90 < th dose independent rect. 6 22
41 162.99 wind 1.0 10 > th dose independent rect. 6 23
42 163.01 atmosphere 1005.0 10 > th dose dependent rect. 2 1
45 163.10 temperature 20.0 90 < th dose independent rect. 4 5
47 163.11 humidity 80.0 90 > th dose independent rect. 4 2
49 163.13 radiation 10.0 43200 < th dose dependent rect. 3 1
50 163.16 precipitation 0.1 90 < th dose independent rect. 4 2
51 163.16 precipitation 0.1 90 < th dose dependent rect. 4 2
52 163.17 precipitation 0.1 10 < th dose independent rect. 5 1
53 163.17 precipitation 0.1 10 < th dose dependent rect. 5 1
59 163.25 wind 9.0 1440 < th dose independent rect. 3 1
60 163.25 temperature 10.0 1440 > th dose independent rect. 3 1
63 163.25 temperature 30.0 1440 < th dose independent rect. 3 1
67 163.25 humidity 50.0 1440 > th dose independent rect. 3 1
76 163.25 atmosphere 1005.0 30 > th dose independent rect. 2 1
77 163.25 atmosphere 995.0 1440 > th dose independent rect. 3 1
78 163.25 radiation 1.0 1440 < th dose independent rect. 3 1
98 163.25 radiation 1.0 10 < th dose independent rect. 6 1
101 163.25 temperature 10.0 1440 > th dose independent rect. 4 23
104 163.25 radiation 1.0 1440 < th dose dependent rect. 3 1
115 163.26 temperature 10.0 90 > th dose independent rect. 4 2
117 163.26 temperature 30.0 90 < th dose independent rect. 4 2
118 163.26 humidity 50.0 90 > th dose independent rect. 4 2
121 163.26 atmosphere 995.0 90 > th dose independent rect. 4 2
122 163.26 atmosphere 1010.0 90 < th dose independent rect. 4 2
124 163.26 radiation 20.0 90 < th dose independent rect. 4 2
132 163.28 wind 3.0 30 < th dose independent rect. 2 1
137 163.35 temperature 25.0 30 < th dose independent rect. 2 1
140 163.37 temperature 10.0 10 > th dose independent rect. 5 1
142 163.37 temperature 30.0 10 < th dose independent rect. 5 1
143 163.37 humidity 50.0 10 > th dose independent rect. 5 1
146 163.37 atmosphere 995.0 10 > th dose independent rect. 5 1
147 163.37 atmosphere 1010.0 10 < th dose independent rect. 5 1
149 163.37 radiation 20.0 10 < th dose independent rect. 5 1
152 163.37 precipitation 0.1 90 < th dose independent rect. 6 22
155 163.37 precipitation 0.1 90 < th dose dependent rect. 6 22
157 163.39 wind 5.0 30 < th dose dependent rect. 2 1
163 163.44 wind 7.0 1440 < th dose independent rect. 5 2
165 163.44 temperature 10.0 1440 > th dose independent rect. 5 2
168 163.44 temperature 30.0 1440 < th dose independent rect. 5 2
172 163.44 humidity 50.0 1440 > th dose independent rect. 5 2
177 163.44 atmosphere 995.0 1440 > th dose independent rect. 5 2
178 163.44 atmosphere 1015.0 1440 < th dose independent rect. 5 2
179 163.44 radiation 40.0 1440 < th dose independent rect. 5 2
183 163.44 temperature 10.0 1440 > th dose independent rect. 7 22
188 163.48 temperature 10.0 30 > th dose dependent rect. 2 1
193 163.50 temperature 10.0 30 > th dose independent rect. 2 1
196 163.50 humidity 50.0 30 > th dose independent rect. 2 1
199 163.50 atmosphere 995.0 30 > th dose independent rect. 2 1
200 163.50 atmosphere 1010.0 30 < th dose independent rect. 2 1
202 163.50 radiation 1.0 30 < th dose independent rect. 2 1
207 163.50 precipitation 0.1 30 < th dose independent rect. 2 1
209 163.50 temperature 10.0 30 > th dose independent rect. 3 23
210 163.50 precipitation 0.1 10 < th dose independent rect. 6 23
211 163.50 radiation 1.0 30 < th dose dependent rect. 2 1
216 163.50 precipitation 0.1 30 < th dose dependent rect. 2 1
218 163.50 temperature 20.0 90 < th dose dependent rect. 4 6
219 163.50 precipitation 0.1 10 < th dose dependent rect. 6 23
244 163.61 radiation 40.0 10 < th dose dependent rect. 5 1
245 163.61 atmosphere 1015.0 90 < th dose dependent rect. 4 2
246 163.61 radiation 40.0 90 < th dose dependent rect. 4 2
248 163.62 humidity 50.0 30 > th dose dependent rect. 2 1
249 163.63 atmosphere 995.0 90 > th dose independent rect. 6 22
251 163.63 atmosphere 1000.0 10 > th dose dependent rect. 5 1
256 163.66 humidity 50.0 90 > th dose dependent rect. 4 2
257 163.67 temperature 30.0 30 < th dose dependent rect. 2 1
266 163.75 atmosphere 995.0 10 > th dose independent rect. 6 23
267 163.77 temperature 25.0 90 > th dose independent rect. 1 3
268 163.78 atmosphere 1015.0 30 < th dose dependent rect. 2 1
272 163.81 wind 1.0 90 > th dose independent rect. 18 10
277 163.87 temperature 15.0 90 > th dose independent rect. 18 10
279 163.90 temperature 25.0 90 > th dose dependent rect. 1 3
286 163.92 radiation 1.0 90 > th dose dependent rect. 4 2
297 163.93 atmosphere 1015.0 10 < th dose dependent rect. 5 1
317 164.04 atmosphere 1005.0 270 > th dose dependent rect. 2 1
322 164.07 wind 1.0 30 > th dose independent rect. 2 1
334 164.12 humidity 50.0 10 > th dose dependent rect. 5 1
365 164.23 atmosphere 1015.0 90 < th dose independent rect. 6 22
371 164.30 atmosphere 995.0 30 > th dose independent rect. 3 23
379 164.33 wind 1.0 10 > th dose independent rect. 9 19
406 164.49 atmosphere 1015.0 10 < th dose independent rect. 6 23
410 164.51 wind 9.0 30 < th dose independent rect. 3 23
450 164.60 temperature 10.0 1440 > th dose independent rect. 19 10
453 164.60 temperature 30.0 1440 < th dose independent rect. 19 10
457 164.60 humidity 50.0 1440 > th dose independent rect. 19 10
459 164.60 atmosphere 995.0 1440 > th dose independent rect. 19 10
460 164.60 radiation 20.0 1440 < th dose independent rect. 19 10
472 164.60 temperature 10.0 1440 > th dose independent rect. 5 14
493 164.69 temperature 15.0 10 > th dose independent rect. 18 11
500 164.72 temperature 15.0 270 > th dose independent rect. 6 19
514 164.82 humidity 50.0 90 > th dose independent rect. 6 22
521 164.85 humidity 50.0 90 > th dose independent rect. 4 14
527 164.89 temperature 15.0 10 > th dose independent rect. 7 19
530 164.92 radiation 1.0 90 > th dose independent rect. 4 1
571 165.01 precipitation 0.1 90 < th dose independent rect. 4 14
584 165.01 precipitation 0.1 90 < th dose dependent rect. 4 14
585 165.02 radiation 10.0 90 < th dose independent rect. 18 10
594 165.05 temperature 10.0 10 > th dose dependent rect. 5 1
597 165.05 radiation 10.0 90 < th dose dependent rect. 18 10
613 165.07 atmosphere 995.0 90 > th dose independent rect. 18 10
619 165.08 wind 9.0 90 < th dose independent rect. 18 10
621 165.08 humidity 50.0 90 > th dose independent rect. 18 10
625 165.08 temperature 10.0 90 > th dose independent rect. 4 14
626 165.08 atmosphere 1015.0 90 < th dose independent rect. 4 14
640 165.14 precipitation 0.1 90 < th dose independent rect. 18 10
641 165.14 precipitation 0.1 90 < th dose dependent rect. 18 10
645 165.15 radiation 1.0 10 > th dose dependent rect. 16 14
647 165.17 atmosphere 995.0 90 > th dose independent rect. 4 14
651 165.17 radiation 1.0 90 > th dose dependent rect. 16 14
659 165.21 temperature 15.0 270 > th dose independent rect. 17 8
662 165.22 radiation 1.0 10 > th dose independent rect. 5 1
675 165.23 wind 5.0 270 < th dose independent rect. 1 5
711 165.31 wind 5.0 270 < th dose dependent rect. 2 1
713 165.31 radiation 20.0 10 < th dose dependent rect. 5 13
715 165.33 wind 1.0 90 > th dose independent rect. 4 2
741 165.43 wind 5.0 30 < th dose dependent rect. 2 5
753 165.50 precipitation 0.1 30 < th dose independent rect. 3 23
754 165.50 precipitation 0.1 30 < th dose dependent rect. 3 23
756 165.52 wind 5.0 270 < th dose independent rect. 2 1
778 165.57 wind 1.0 10 < th dose independent rect. 5 22
780 165.59 atmosphere 1000.0 270 > th dose dependent rect. 23 7
791 165.63 radiation 10.0 10 < th dose dependent rect. 18 11
792 165.64 temperature 30.0 90 < th dose independent rect. 18 10
797 165.65 radiation 1.0 10 > th dose independent rect. 16 14
800 165.66 wind 9.0 90 < th dose independent rect. 4 14
804 165.67 radiation 10.0 10 < th dose independent rect. 18 11
817 165.72 wind 9.0 10 < th dose independent rect. 18 11
818 165.72 atmosphere 1010.0 10 < th dose independent rect. 18 11
833 165.74 wind 3.0 30 < th dose independent rect. 2 5
834 165.74 wind 7.0 270 < th dose dependent rect. 1 5
887 165.79 temperature 15.0 10 > th dose independent rect. 20 9
897 165.81 temperature 15.0 10 > th dose independent rect. 9 17
902 165.83 precipitation 0.1 10 < th dose independent rect. 5 13
904 165.83 precipitation 0.1 10 < th dose dependent rect. 5 13
909 165.85 atmosphere 1010.0 90 < th dose independent rect. 18 10
931 165.92 humidity 50.0 10 > th dose independent rect. 18 11
935 165.92 temperature 10.0 10 > th dose independent rect. 5 13
937 165.92 atmosphere 1015.0 10 < th dose independent rect. 5 13
941 165.92 atmosphere 1000.0 10 > th dose dependent rect. 2 7
944 165.93 atmosphere 995.0 10 > th dose independent rect. 18 11
966 165.99 atmosphere 995.0 10 > th dose independent rect. 5 13
977 166.02 temperature 10.0 30 > th dose dependent rect. 18 8
985 166.05 precipitation 0.1 10 < th dose independent rect. 18 11
990 166.05 precipitation 0.1 10 < th dose dependent rect. 18 11
993 166.07 wind 1.0 10 > th dose independent rect. 24 14