BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0766900 Os01g0766900|AK110759
(173 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0766900 Conserved hypothetical protein 281 2e-76
Os05g0510800 Conserved hypothetical protein 262 9e-71
Os03g0770800 CSLC9 245 1e-65
Os07g0124750 222 1e-58
Os09g0428000 Glycosyl transferase, family 2 domain containi... 206 8e-54
Os08g0253800 Glycosyl transferase, family 2 domain containi... 186 8e-48
Os02g0192500 Similar to Cellulose synthase-like protein (Fr... 79 2e-15
Os10g0406400 Conserved hypothetical protein 67 8e-12
Os07g0630900 Conserved hypothetical protein 66 1e-11
Os03g0377700 Cellulose synthase-like A5 64 6e-11
Os03g0169500 Similar to Cellulose synthase-like A4 64 7e-11
>Os01g0766900 Conserved hypothetical protein
Length = 173
Score = 281 bits (718), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 142/173 (82%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL
Sbjct: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAXXXXXXXXXXXXXX 120
FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLA
Sbjct: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAKESHPKKDSKKKKH 120
Query: 121 NRIYQKEXXXXXXXXXXXXXXXXXVQGIHFYFLLFQGVSFLVVGLDLIGEQVE 173
NRIYQKE VQGIHFYFLLFQGVSFLVVGLDLIGEQVE
Sbjct: 121 NRIYQKELALSFLLLTAAARSLLSVQGIHFYFLLFQGVSFLVVGLDLIGEQVE 173
>Os05g0510800 Conserved hypothetical protein
Length = 252
Score = 262 bits (670), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/174 (77%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
PMTMFVPEAELPAWVVCYIPATMS+LNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL
Sbjct: 79 PMTMFVPEAELPAWVVCYIPATMSILNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 138
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAXXXXX-XXXXXXXX 119
FQLGSAYEWVVTKKSGRSSEGDLV LVEK KQQRVGSAPNLD+L
Sbjct: 139 FQLGSAYEWVVTKKSGRSSEGDLVGLVEKHSKQQRVGSAPNLDALTKEESNPKKDSKKKK 198
Query: 120 XNRIYQKEXXXXXXXXXXXXXXXXXVQGIHFYFLLFQGVSFLVVGLDLIGEQVE 173
NRIY+KE QGIHFYFLLFQGVSFLVVGLDLIGEQVE
Sbjct: 199 HNRIYRKELALSFLLLTAAARSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQVE 252
>Os03g0770800 CSLC9
Length = 596
Score = 245 bits (626), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/173 (69%), Positives = 133/173 (76%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
PMTMFVPEAELP WVVCYIPA MSLLNILP+PKSFPFI+PYLLFENTMSVTKFNAMISGL
Sbjct: 424 PMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMISGL 483
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAXXXXXXXXXXXXXX 120
FQLG+AYEWVVTKKSGRSSEGDL+SL K+ K Q+ SAPNLD++A
Sbjct: 484 FQLGNAYEWVVTKKSGRSSEGDLISLAPKELKHQKTESAPNLDAIAKEQSAPRKDVKKKH 543
Query: 121 NRIYQKEXXXXXXXXXXXXXXXXXVQGIHFYFLLFQGVSFLVVGLDLIGEQVE 173
NRIY+KE QGIHFYFLLFQG+SFL+VGLDLIGEQ+E
Sbjct: 544 NRIYKKELALSLLLLTAAARSLLSKQGIHFYFLLFQGISFLLVGLDLIGEQIE 596
>Os07g0124750
Length = 686
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 126/174 (72%), Gaps = 1/174 (0%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
PMTMF+PEAELP WVVCYIPA MS LNILPAPKSFPFI+PYLLFENTMSVTKFNAMISGL
Sbjct: 513 PMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLFENTMSVTKFNAMISGL 572
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAXXXXXX-XXXXXXX 119
FQLGSAYEWVVTKKSGRSSEGDL++L K+ KQQ++ + +
Sbjct: 573 FQLGSAYEWVVTKKSGRSSEGDLIALAPKELKQQKILDLTAIKEQSMLKQSSPRNEAKKK 632
Query: 120 XNRIYQKEXXXXXXXXXXXXXXXXXVQGIHFYFLLFQGVSFLVVGLDLIGEQVE 173
NRIY+KE QGIHFYFL+FQG+SFL+VGLDLIGE V+
Sbjct: 633 YNRIYKKELALSLLLLTAAARSLLSKQGIHFYFLMFQGLSFLLVGLDLIGEDVK 686
>Os09g0428000 Glycosyl transferase, family 2 domain containing protein
Length = 485
Score = 206 bits (524), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 122/181 (67%), Gaps = 8/181 (4%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P+TMFVPEAELP WV+CY+P MS LNILP+P+SFPFIVPYLLFENTMSVTKFNAM+SGL
Sbjct: 305 PLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLFENTMSVTKFNAMVSGL 364
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQ------PKQQRVGSAPNLDSLAXXXXXXXX 114
F+LGS+YEW+VTKKSGRSSE DL + E+ P+ Q+ S L L
Sbjct: 365 FKLGSSYEWIVTKKSGRSSESDLSTAAERDTKDLTLPRLQKQISESELIELKMQKERQEK 424
Query: 115 X--XXXXXNRIYQKEXXXXXXXXXXXXXXXXXVQGIHFYFLLFQGVSFLVVGLDLIGEQV 172
N++Y+KE QGIHFYFLLFQGVSFL VGLDLIGEQ+
Sbjct: 425 APLGAKKANKVYKKELALSLLLLTAATRSLLSAQGIHFYFLLFQGVSFLFVGLDLIGEQI 484
Query: 173 E 173
+
Sbjct: 485 D 485
>Os08g0253800 Glycosyl transferase, family 2 domain containing protein
Length = 482
Score = 186 bits (472), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 121/199 (60%), Gaps = 27/199 (13%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P+TMFVPEAELP WV+CY+P MS+LNILPAPKSFPF++PYLLFENTMSVTKFNAM+SGL
Sbjct: 283 PLTMFVPEAELPIWVICYVPVIMSVLNILPAPKSFPFVIPYLLFENTMSVTKFNAMVSGL 342
Query: 61 FQLGSAYEWVVTKKSGR-SSEGDLVSLVEKQ--------PKQQRVGSAPNLDSLAXXXX- 110
FQLGS+YEWVVTKK+GR SSE D+++L E K R S L A
Sbjct: 343 FQLGSSYEWVVTKKAGRTSSESDILALAEAADADARPPPAKLHRGVSEGGLKEWAKLHKE 402
Query: 111 -----------------XXXXXXXXXXNRIYQKEXXXXXXXXXXXXXXXXXVQGIHFYFL 153
NRI++KE QG+HFYFL
Sbjct: 403 QEDATAAAAAAAAPGTPVKKSKAAKAPNRIFKKELALAFLLLTAATRSLLSAQGLHFYFL 462
Query: 154 LFQGVSFLVVGLDLIGEQV 172
LFQGV+FL VGLDLIGEQV
Sbjct: 463 LFQGVTFLAVGLDLIGEQV 481
>Os02g0192500 Similar to Cellulose synthase-like protein (Fragment)
Length = 521
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P T+FVPE +P W YIP ++LLN + P+SF + ++LFEN MS+ + A + GL
Sbjct: 370 PATIFVPEVRIPKWGCVYIPTIITLLNSVGTPRSFHLLFFWILFENVMSLHRTKATLIGL 429
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAXXXXXXXXXXXXXX 120
+ G A EWVVT+K G + + S + RV N+ L
Sbjct: 430 LEAGRANEWVVTEKLGNALKMKSSSKSSAKKSFMRVWDRLNVTELG---VAAFLFSCGWY 486
Query: 121 NRIYQKEXXXXXXXXXXXXXXXXXVQGIHFY-FLLFQGVSFLVVGLDLIGEQV 172
+ + K+ HF+ +L FQG +F +VG+ +G V
Sbjct: 487 DLAFGKD---------------------HFFIYLFFQGAAFFIVGIGYVGTIV 518
>Os10g0406400 Conserved hypothetical protein
Length = 264
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P++ VPE +P W + YIP ++++N + P S + ++LFEN M++ + A +SGL
Sbjct: 113 PLSAMVPEVTIPVWGLVYIPTAITIMNAIRNPGSVHLMPFWILFENVMAMHRMRAALSGL 172
Query: 61 FQLGSAYEWVVTKKSGRSSEGDL 83
+ A +WVVT+K G + +L
Sbjct: 173 LETARANDWVVTEKVGDQVKDEL 195
>Os07g0630900 Conserved hypothetical protein
Length = 320
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P+++ +PE +P W V YIP + ++ + P++ + ++LFE+ M+V + A ++GL
Sbjct: 170 PLSVMIPELFIPIWGVAYIPMALLIITTIRNPRNLHIMPFWILFESVMTVLRMRAALTGL 229
Query: 61 FQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQR 95
+L +W VTKK G S E V L+ K K+ R
Sbjct: 230 MELSGFNKWTVTKKIGSSVEDTQVPLLPKTRKRLR 264
>Os03g0377700 Cellulose synthase-like A5
Length = 574
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P+++ +PE LP W V YIP + ++ + P++ + ++LFE+ MS+ + A ++GL
Sbjct: 420 PVSVMIPELFLPIWGVAYIPTALLIVTAIRNPENLHTVPLWILFESVMSMHRLRAAVAGL 479
Query: 61 FQLGSAYEWVVTKKSGRSS--EGDLVSLVEKQPKQ 93
QL +W+VTKK G ++ E + L++K K+
Sbjct: 480 LQLQEFNQWIVTKKVGNNAFDENNETPLLQKSRKR 514
>Os03g0169500 Similar to Cellulose synthase-like A4
Length = 624
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%)
Query: 1 PMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGL 60
P+++ VPE +P W + YIP ++++N + P S + ++LFEN M++ + A ++GL
Sbjct: 443 PLSVMVPEVSIPVWGMVYIPTAITIMNAIRNPGSIHLMPFWILFENVMAMHRMRAALTGL 502
Query: 61 FQLGSAYEWVVTKKSGRSSEGDL 83
+ + +WVVT+K G + L
Sbjct: 503 LETMNVNQWVVTEKVGDHVKDKL 525
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,427,127
Number of extensions: 137607
Number of successful extensions: 282
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 11
Length of query: 173
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 79
Effective length of database: 12,127,685
Effective search space: 958087115
Effective search space used: 958087115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)