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Os01g0766900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.73 (0.0221) R2 : 0.322
β1 : 0.741 (0.0806) R2dD : 0.13 R2D : 0.119
β2 : 0.612 (0.0536) R2dC : 0.195 R2C : 0.193
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.113 (0.047) R2dN8 : 0.0116 R2N8 : -0.00533
σ : 0.414
deviance : 78.22
__
_____
C
peak time of C : 21.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.38 0.389 9.72 0.775 0.356 -0.513 0.00436 0.285 0.109 18.1 11.03 6 -- --
68.88 0.387 9.72 0.786 0.359 -0.505 -0.029 -- 0.109 18.1 11 5 -- --
68.44 0.385 9.72 0.775 0.354 -0.513 -- 0.288 0.109 18.1 11.28 5 -- --
68.88 0.387 9.73 0.787 0.357 -0.51 -- -- 0.109 18.1 10.93 5 -- --
74.93 0.403 9.72 0.766 -- -0.509 -- 0.301 0.102 -- 11.28 5 -- --
78.01 0.414 9.73 0.732 0.611 -- -0.232 -- 0.113 21.8 -- -- -- --
78.22 0.414 9.73 0.741 0.612 -- -- -- 0.113 21.8 -- -- -- --
75.48 0.405 9.72 0.778 -- -0.504 -- -- 0.102 -- 11.29 5 -- --
83.27 0.425 9.73 -- 0.383 -0.533 -- -- 0.0514 17.6 9.871 10 -- --
100.58 0.469 9.72 0.748 -- -- -- -- 0.113 -- -- -- -- --
92.71 0.45 9.75 -- 0.614 -- -- -- 0.0307 21.9 -- -- -- --
88.58 0.438 9.74 -- -- -0.512 -- -- -0.0069 -- 9.702 8 -- --
115.32 0.501 9.73 -- -- -- -- -- 0.0299 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.76 temperature 15.0 270 > th dose independent rect. 18 9
3 58.58 temperature 15.0 90 > th dose independent rect. 20 8
4 59.02 temperature 10.0 90 > th dose dependent rect. 20 8
5 59.03 humidity 80.0 270 > th dose independent rect. 2 6
7 59.09 temperature 15.0 10 > th dose independent rect. 20 9
11 59.58 radiation 1.0 270 < th dose independent rect. 3 15
13 59.71 radiation 20.0 10 < th dose dependent rect. 5 15
18 60.15 temperature 15.0 270 > th dose independent rect. 7 19
19 60.23 radiation 1.0 270 < th dose independent rect. 18 9
20 60.28 precipitation 0.1 270 < th dose independent rect. 18 9
21 60.28 precipitation 0.1 270 < th dose dependent rect. 18 9
23 60.29 humidity 60.0 270 > th dose independent rect. 18 9
24 60.30 radiation 40.0 90 < th dose dependent rect. 15 18
27 60.33 radiation 10.0 270 < th dose dependent rect. 18 9
29 60.38 humidity 60.0 270 > th dose dependent rect. 2 5
31 60.39 temperature 30.0 270 < th dose independent rect. 18 9
33 60.41 humidity 50.0 270 > th dose independent rect. 7 19
34 60.42 wind 9.0 270 < th dose independent rect. 18 9
41 60.47 atmosphere 995.0 270 > th dose independent rect. 18 9
45 60.47 temperature 10.0 270 > th dose independent rect. 3 15
46 60.47 atmosphere 1015.0 270 < th dose independent rect. 3 15
50 60.61 humidity 50.0 270 > th dose independent rect. 7 7
51 60.63 temperature 10.0 270 > th dose dependent rect. 2 5
53 60.73 radiation 40.0 1440 < th dose dependent rect. 21 8
57 60.86 radiation 1.0 270 < th dose dependent rect. 3 15
59 60.91 humidity 50.0 270 > th dose independent rect. 6 21
62 60.95 radiation 20.0 270 < th dose independent rect. 2 5
65 60.97 temperature 10.0 10 > th dose dependent rect. 20 9
66 60.98 wind 9.0 270 < th dose independent rect. 3 15
67 60.99 radiation 10.0 10 < th dose independent rect. 5 15
68 60.99 radiation 10.0 270 < th dose dependent rect. 3 4
71 61.02 precipitation 0.1 270 < th dose independent rect. 7 7
72 61.02 radiation 30.0 270 < th dose dependent rect. 2 5
74 61.02 precipitation 0.1 270 < th dose dependent rect. 7 7
79 61.06 temperature 10.0 1440 > th dose independent rect. 21 8
82 61.06 temperature 30.0 1440 < th dose independent rect. 21 8
86 61.06 humidity 50.0 1440 > th dose independent rect. 21 8
92 61.06 atmosphere 995.0 1440 > th dose independent rect. 21 8
93 61.06 radiation 20.0 1440 < th dose independent rect. 21 8
105 61.06 temperature 10.0 1440 > th dose independent rect. 5 16
109 61.07 radiation 1.0 270 > th dose independent rect. 7 7
113 61.11 precipitation 0.1 270 < th dose independent rect. 3 15
115 61.11 precipitation 0.1 270 < th dose dependent rect. 3 15
117 61.14 temperature 10.0 270 > th dose independent rect. 7 7
118 61.14 atmosphere 995.0 270 > th dose independent rect. 7 7
119 61.14 atmosphere 1015.0 270 < th dose independent rect. 7 7
120 61.14 temperature 10.0 270 > th dose independent rect. 14 17
126 61.17 temperature 15.0 30 > th dose independent rect. 9 19
127 61.17 temperature 10.0 270 > th dose dependent rect. 3 3
135 61.23 wind 9.0 270 < th dose independent rect. 2 5
136 61.23 temperature 10.0 270 > th dose independent rect. 2 5
138 61.23 temperature 30.0 270 < th dose independent rect. 2 5
139 61.23 humidity 50.0 270 > th dose independent rect. 2 5
141 61.23 atmosphere 995.0 270 > th dose independent rect. 2 5
142 61.23 atmosphere 1015.0 270 < th dose independent rect. 2 5
144 61.23 precipitation 0.1 90 < th dose independent rect. 20 8
146 61.23 precipitation 0.1 90 < th dose dependent rect. 20 8
147 61.25 radiation 10.0 270 < th dose independent rect. 3 3
148 61.25 wind 9.0 270 < th dose independent rect. 7 19
151 61.27 radiation 20.0 90 < th dose independent rect. 15 18
161 61.34 precipitation 0.1 270 < th dose independent rect. 7 19
165 61.34 precipitation 0.1 270 < th dose dependent rect. 7 19
181 61.40 precipitation 0.1 10 < th dose independent rect. 20 9
185 61.40 precipitation 0.1 10 < th dose dependent rect. 20 9
189 61.45 wind 9.0 270 < th dose independent rect. 7 7
198 61.53 radiation 40.0 270 < th dose independent rect. 14 17
209 61.63 temperature 15.0 270 > th dose independent rect. 6 21
210 61.64 wind 9.0 270 < th dose independent rect. 14 17
211 61.65 wind 9.0 90 < th dose independent rect. 20 8
214 61.66 temperature 30.0 90 < th dose independent rect. 20 8
215 61.66 humidity 50.0 90 > th dose independent rect. 20 8
218 61.66 atmosphere 995.0 90 > th dose independent rect. 20 8
219 61.66 radiation 1.0 90 < th dose independent rect. 20 8
226 61.66 radiation 1.0 90 < th dose dependent rect. 20 8
231 61.67 atmosphere 1010.0 270 < th dose independent rect. 3 3
235 61.69 precipitation 0.1 270 < th dose independent rect. 2 5
238 61.69 precipitation 0.1 270 < th dose dependent rect. 2 5
240 61.70 wind 9.0 270 < th dose independent rect. 3 3
241 61.70 temperature 10.0 270 > th dose independent rect. 3 3
243 61.70 temperature 30.0 270 < th dose independent rect. 3 3
244 61.70 humidity 50.0 270 > th dose independent rect. 3 3
247 61.70 atmosphere 995.0 270 > th dose independent rect. 3 3
255 61.72 radiation 1.0 10 < th dose dependent rect. 20 9
261 61.77 atmosphere 1010.0 10 < th dose independent rect. 20 9
262 61.77 atmosphere 995.0 270 > th dose independent rect. 3 15
263 61.77 wind 9.0 270 < th dose independent rect. 6 21
285 61.87 precipitation 0.1 270 < th dose independent rect. 6 21
288 61.87 precipitation 0.1 270 < th dose dependent rect. 6 21
305 61.94 precipitation 0.1 270 < th dose independent rect. 14 17
307 61.94 precipitation 0.1 270 < th dose dependent rect. 14 17
315 61.96 wind 9.0 10 < th dose independent rect. 20 9
316 61.96 radiation 20.0 90 < th dose independent rect. 13 20
322 61.97 temperature 30.0 10 < th dose independent rect. 20 9
323 61.97 humidity 50.0 10 > th dose independent rect. 20 9
326 61.97 atmosphere 995.0 10 > th dose independent rect. 20 9
327 61.97 radiation 1.0 10 < th dose independent rect. 20 9
332 61.97 temperature 10.0 10 > th dose independent rect. 5 15
334 61.97 atmosphere 1015.0 10 < th dose independent rect. 5 15
335 61.97 atmosphere 995.0 270 > th dose independent rect. 14 17
385 62.20 radiation 1.0 14400 < th dose dependent rect. 21 7
388 62.22 precipitation 0.1 10 < th dose independent rect. 5 15
390 62.22 precipitation 0.1 10 < th dose dependent rect. 5 15
398 62.27 precipitation 0.1 270 < th dose independent rect. 3 3
400 62.27 radiation 1.0 10 > th dose independent rect. 9 7
401 62.27 precipitation 0.1 270 < th dose dependent rect. 3 3
411 62.28 atmosphere 995.0 270 > th dose independent rect. 7 19
435 62.39 temperature 10.0 1440 > th dose independent rect. 5 5
438 62.39 atmosphere 995.0 1440 > th dose independent rect. 5 5
439 62.39 atmosphere 1015.0 1440 < th dose independent rect. 5 5
441 62.39 temperature 10.0 1440 > th dose independent rect. 10 19
445 62.40 wind 1.0 270 > th dose independent rect. 2 5
484 62.47 atmosphere 995.0 270 > th dose dependent rect. 3 3
486 62.49 wind 9.0 10 < th dose independent rect. 5 15
491 62.50 atmosphere 995.0 270 > th dose dependent rect. 2 5
506 62.55 wind 1.0 270 > th dose independent rect. 3 3
540 62.69 atmosphere 995.0 10 > th dose independent rect. 5 15
637 62.94 humidity 80.0 90 < th dose independent rect. 23 16
644 62.95 wind 9.0 270 < th dose dependent rect. 2 5
648 62.97 wind 1.0 270 > th dose independent rect. 2 16
649 62.97 humidity 80.0 90 < th dose independent rect. 21 18
650 62.97 precipitation 0.1 90 < th dose independent rect. 9 19
651 62.97 precipitation 0.1 90 < th dose dependent rect. 9 19
655 62.99 wind 1.0 270 > th dose independent rect. 18 9
656 62.99 temperature 15.0 270 > th dose independent rect. 20 16
666 63.00 radiation 40.0 10 < th dose dependent rect. 5 4
688 63.06 wind 1.0 270 > th dose independent rect. 7 7
693 63.06 temperature 10.0 90 > th dose dependent rect. 4 16
724 63.12 radiation 30.0 10 < th dose independent rect. 16 17
725 63.12 atmosphere 1015.0 270 < th dose independent rect. 7 19
751 63.15 atmosphere 995.0 270 > th dose independent rect. 6 21
786 63.21 humidity 50.0 4320 > th dose independent rect. 5 5
843 63.29 humidity 80.0 90 > th dose independent rect. 4 15
853 63.32 wind 9.0 270 < th dose dependent rect. 18 8
862 63.35 wind 1.0 270 > th dose independent rect. 14 16
896 63.38 humidity 80.0 10 < th dose independent rect. 22 17
909 63.43 wind 9.0 270 < th dose dependent rect. 3 3
934 63.48 radiation 1.0 270 > th dose independent sin 2 NA
960 63.52 humidity 60.0 270 > th dose dependent rect. 23 9
970 63.56 humidity 80.0 10 > th dose independent rect. 5 15
972 63.56 atmosphere 995.0 90 > th dose dependent rect. 4 5
987 63.61 precipitation 0.1 90 < th dose independent rect. 9 6
990 63.61 wind 1.0 270 > th dose independent rect. 7 19
992 63.61 humidity 50.0 10 > th dose dependent rect. 5 4
994 63.61 precipitation 0.1 90 < th dose dependent rect. 9 6