BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0724500 Os01g0724500|AK067653
(205 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0724500 Similar to ABC transporter (PDR5-like) isolog ... 417 e-117
Os06g0554800 Similar to ABC transporter (PDR5-like) isolog ... 293 7e-80
Os02g0318500 Similar to PDR6 ABC transporter 208 2e-54
Os01g0342700 Similar to PDR-like ABC transporter (PDR4 ABC ... 200 5e-52
Os01g0609900 Similar to PDR-like ABC transporter (PDR4 ABC ... 198 3e-51
Os01g0609200 ABC transporter related domain containing protein 190 7e-49
Os02g0528900 Similar to PDR9 ABC transporter 189 1e-48
Os01g0609300 PDR-like ABC transporter (PDR3 ABC transporter) 187 4e-48
Os01g0609066 Putative DNA binding domain containing protein 186 9e-48
Os12g0512700 Similar to PDR9 ABC transporter 159 2e-39
Os01g0516800 ABC transporter related domain containing protein 148 3e-36
Os09g0333050 95 4e-20
Os09g0332360 ABC transporter related domain containing protein 84 5e-17
AK110184 80 1e-15
Os11g0587600 Similar to PDR11 ABC transporter 77 7e-15
>Os01g0724500 Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC
transporter)
Length = 205
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE
Sbjct: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP
Sbjct: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA 180
KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA
Sbjct: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA 180
Query: 181 TGALLGFTILFNVLFSLSLMYLNRK 205
TGALLGFTILFNVLFSLSLMYLNRK
Sbjct: 181 TGALLGFTILFNVLFSLSLMYLNRK 205
>Os06g0554800 Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC
transporter)
Length = 1167
Score = 293 bits (749), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 166/207 (80%), Gaps = 4/207 (1%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
FA+LSLT+ RLPVF+KHRD LFY W F LPNV++RIP S+ ESI+WV +TYYT+GFAPE
Sbjct: 270 FAELSLTITRLPVFFKHRDLLFYPAWIFTLPNVILRIPFSIIESIVWVIVTYYTIGFAPE 329
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
A RFFK LL+VF++QQMA GLFR TAGLCR++++ T G+LA+LI FVLGGF+LPK IP
Sbjct: 330 ADRFFKQLLLVFLIQQMAGGLFRATAGLCRSMIIAQTGGALALLIFFVLGGFLLPKAFIP 389
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDG----KRLGVAVLENSGVFTNKEW 176
KWW+W YW SPL Y Y A + NE +SPRWM+KFV D KRLG+A++E + +FT+K W
Sbjct: 390 KWWIWGYWVSPLMYGYNALAVNEFYSPRWMNKFVLDNNGVPKRLGIALMEGANIFTDKNW 449
Query: 177 YWIATGALLGFTILFNVLFSLSLMYLN 203
+WI LLGFT+ FNVLF+LSL+YLN
Sbjct: 450 FWIGAAGLLGFTMFFNVLFTLSLVYLN 476
>Os02g0318500 Similar to PDR6 ABC transporter
Length = 1315
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 141/206 (68%), Gaps = 3/206 (1%)
Query: 2 ADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPEA 61
++L+LT+ +LPVFYKHRDFLF+ PWTF + N+L+++P SL E+ +WV ITYY MGFAP A
Sbjct: 487 SELNLTVKKLPVFYKHRDFLFFPPWTFGVANILIKVPVSLVEATVWVVITYYVMGFAPAA 546
Query: 62 SRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIPK 121
RFF+ L F+ MA LFR + +T+V+ + G L +LI+FV GGF++ K+ I
Sbjct: 547 GRFFRQFLAFFVTHLMAMALFRFLGAILQTMVIAISFGMLVLLIVFVFGGFVIRKNDIRP 606
Query: 122 WWVWAYWCSPLTYAYIAFSSNEMHSPRWM---DKFVPDGKRLGVAVLENSGVFTNKEWYW 178
WW+W YW SP+ Y+ A S NE + RW + D K +G A+L++ G+FT + +W
Sbjct: 607 WWIWCYWASPMMYSQNAISINEFLASRWAIPNNDTTIDAKTVGEAILKSKGLFTGEWGFW 666
Query: 179 IATGALLGFTILFNVLFSLSLMYLNR 204
++ GAL+GF ILFN L+ L+L YL+R
Sbjct: 667 LSIGALVGFIILFNTLYILALTYLSR 692
>Os01g0342700 Similar to PDR-like ABC transporter (PDR4 ABC transporter)
Length = 1451
Score = 200 bits (509), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 138/203 (67%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
FA+L +T+ +LPVF+K RD LF+ WT+ +P+ +++IP + FE ++V TYY +GF P
Sbjct: 582 FAELGMTVMKLPVFFKQRDLLFFPAWTYTIPSWILQIPVTFFEVGVYVFTTYYVVGFDPN 641
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
SRFFK L++ L QM++ LFR AG+ R +VV+ T G L++L LGGFIL + +
Sbjct: 642 VSRFFKQYLLLVALNQMSSSLFRFIAGIGRDMVVSQTFGPLSLLAFTALGGFILARPDVK 701
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA 180
KWW+W YW SPL+YA A S+NE W F +G+++L++ G+FT +WYWI
Sbjct: 702 KWWIWGYWISPLSYAQNAISTNEFLGRSWNKSFPGQNDTVGISILKSRGIFTEAKWYWIG 761
Query: 181 TGALLGFTILFNVLFSLSLMYLN 203
GAL+G+T+LFN+L++++L +L
Sbjct: 762 FGALIGYTLLFNLLYTVALSFLK 784
>Os01g0609900 Similar to PDR-like ABC transporter (PDR4 ABC transporter)
Length = 1388
Score = 198 bits (503), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 139/203 (68%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
FA+L++T+ +LPVF+K RD LF+ W + +P+ +++IP + E ++V ITYY +GF P
Sbjct: 516 FAELAMTVMKLPVFFKQRDLLFFPAWAYTIPSWILQIPITFLEVGVYVFITYYVIGFDPS 575
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
SRFFK L++ L QM++ LFR AG+ R +VV++T G L++L LGGFIL + +
Sbjct: 576 VSRFFKQYLLLLALNQMSSALFRFIAGIGRDMVVSHTFGPLSLLAFAALGGFILARPDVK 635
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA 180
KWW+W YW SPL+YA A S+NE W + LGV+VL++ G+FT +WYWI
Sbjct: 636 KWWIWGYWISPLSYAQNAISTNEFLGHSWSQILPGENVTLGVSVLKSRGIFTEAKWYWIG 695
Query: 181 TGALLGFTILFNVLFSLSLMYLN 203
GALLG+T+LFN+L++++L L+
Sbjct: 696 LGALLGYTLLFNLLYTVALSVLS 718
>Os01g0609200 ABC transporter related domain containing protein
Length = 1444
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 131/206 (63%), Gaps = 4/206 (1%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
++L LT+ +LPVF+K RD LF+ WT+ +P+ +++IP S E +V ++YY +GF P
Sbjct: 594 LSELPLTIFKLPVFFKQRDLLFFPAWTYTIPSWILKIPMSFIEVGGFVFMSYYVIGFDPS 653
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
A RFFK L++ + QMAA LFR G R ++V N GS +LI VLGGFIL ++ +
Sbjct: 654 AGRFFKQYLLMLAINQMAAALFRFVGGAARNMIVANVFGSFMLLIFMVLGGFILVREKVK 713
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPD---GKRLGVAVLENSGVFTNKEWY 177
KWW+W YW SP+ YA A S NE W DK + + + LGV L + GVF +WY
Sbjct: 714 KWWIWGYWISPMMYAQNAISVNEFLGHSW-DKVLNNSLSNETLGVQALRSRGVFPEAKWY 772
Query: 178 WIATGALLGFTILFNVLFSLSLMYLN 203
WI GALLGF +LFN LF+L+L YL
Sbjct: 773 WIGFGALLGFIMLFNGLFTLALTYLK 798
>Os02g0528900 Similar to PDR9 ABC transporter
Length = 342
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 135/199 (67%), Gaps = 1/199 (0%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
F +L++ ++RLPVFYK RD+ FY W +A+P+ +++IP SL ESI W +I+YY +G+ PE
Sbjct: 94 FPELAIAVSRLPVFYKQRDYYFYPAWAYAIPSFILKIPLSLVESITWTSISYYLIGYTPE 153
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
ASRFF LL++F++ A LFR A C+T+V ++ G+++ L++ + GGFI+P+ ++P
Sbjct: 154 ASRFFCQLLILFLVHTGALSLFRCVASYCQTMVASSVGGTMSFLVILLFGGFIIPRLSMP 213
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA 180
W W +W SPL+YA I + NE +PRW+ K G LG VL + G+ + +YWI+
Sbjct: 214 NWLKWGFWISPLSYAEIGLTGNEFLAPRWL-KTTTSGVTLGRRVLMDRGLDFSSYFYWIS 272
Query: 181 TGALLGFTILFNVLFSLSL 199
AL+GF +L NV +++ L
Sbjct: 273 ASALIGFILLLNVGYAIGL 291
>Os01g0609300 PDR-like ABC transporter (PDR3 ABC transporter)
Length = 1457
Score = 187 bits (475), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 130/205 (63%), Gaps = 4/205 (1%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
F++L+LT+ +LPVF+K RD LFY W++ +P+ +++IP + E +V +TYY +GF
Sbjct: 585 FSELALTVFKLPVFFKQRDLLFYPAWSYTIPSWILKIPITFIEVGGYVFLTYYVIGFDSN 644
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
FFK L++ + QMA LFR G R ++V N S +LI VLGGFIL ++ +
Sbjct: 645 VGSFFKQYLLMLAINQMAGSLFRFIGGAARNMIVANVFASFMLLIFMVLGGFILAREQVK 704
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFV---PDGKRLGVAVLENSGVFTNKEWY 177
KWW+W YW SP+ YA A S NE+ W +K V + LGV VL++ GVF WY
Sbjct: 705 KWWIWGYWISPMMYAQNAISVNELMGHSW-NKIVNSSASNETLGVQVLKSRGVFPEARWY 763
Query: 178 WIATGALLGFTILFNVLFSLSLMYL 202
WI GA++GFTILFN LF+L+L YL
Sbjct: 764 WIGFGAMIGFTILFNALFTLALTYL 788
>Os01g0609066 Putative DNA binding domain containing protein
Length = 1472
Score = 186 bits (472), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
++L LT+ +LPVF+K RD LF+ WT+ +P+ +++ P S E + ++YY +GF P
Sbjct: 598 LSELPLTIFKLPVFFKQRDLLFFPAWTYTIPSWILKSPMSFIEVGGFCFMSYYVIGFDPN 657
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
RFFK L++ + QMAA LFR G R ++V N GS +LI VLGGFIL +D +
Sbjct: 658 VGRFFKQYLLMLAVSQMAAALFRFVGGAARNLIVANVFGSFMLLIFMVLGGFILARDKVN 717
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPD---GKRLGVAVLENSGVFTNKEWY 177
KWW+W YW SP+ YA A S NE W DK + + + LGV L + G+F +WY
Sbjct: 718 KWWIWGYWISPMMYAQNAVSVNEFLGHSW-DKVLNNSLSNETLGVQALMSRGIFPEAKWY 776
Query: 178 WIATGALLGFTILFNVLFSLSLMYLN 203
WI GALLGF +LFN+LF+L+L YL
Sbjct: 777 WIGFGALLGFIMLFNILFTLALTYLK 802
>Os12g0512700 Similar to PDR9 ABC transporter
Length = 721
Score = 159 bits (401), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Query: 3 DLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPEAS 62
++S+ + RLP FYK + + FY W +A+P ++++P S+ +S++W+ ITYY +G+ S
Sbjct: 332 EISMQIRRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDSLVWICITYYGIGYTASVS 391
Query: 63 RFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIPKW 122
RFF L++ + Q L+R A +T + LA+ + GGF LPK ++P W
Sbjct: 392 RFFCQFLMLCFVHQSVTSLYRFIASYFQTPTASFFYLFLALTFFLMFGGFTLPKPSMPGW 451
Query: 123 WVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIATG 182
W +W SP+TYA I NE +PRW + + + +G +L N G++ + +YWI+ G
Sbjct: 452 LNWGFWISPMTYAEIGTVINEFQAPRWQKETIQN-ITIGNRILINHGLYYSWHFYWISIG 510
Query: 183 ALLGFTILFNVLFSLSLMYL 202
AL G ILF + F L+L Y+
Sbjct: 511 ALFGSIILFYIAFGLALDYI 530
>Os01g0516800 ABC transporter related domain containing protein
Length = 2761
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 118/199 (59%), Gaps = 1/199 (0%)
Query: 1 FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE 60
DL T+ +LP+F+ RD +FY W + P +++IP +L + IWV +TYY +GF
Sbjct: 834 MCDLGGTIMKLPLFFTQRD-VFYPAWAYTFPTWILKIPITLIQVTIWVTMTYYPIGFDRN 892
Query: 61 ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP 120
R KH ++ L QM++ LFR+ AG+ R + G+ +L++ +L GF++ +
Sbjct: 893 IGRLAKHYFLLLALSQMSSSLFRLVAGVTRNMFAAKIFGTFTMLLLLLLSGFVVSSKNLN 952
Query: 121 KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA 180
K+W+ YW SPL YA A S+NE + W + LG +VLE+ G+F +WYW+
Sbjct: 953 KFWMLGYWISPLMYAQNAISTNEFTAHSWSKVLPGSSESLGASVLESRGLFLETKWYWVG 1012
Query: 181 TGALLGFTILFNVLFSLSL 199
GAL+G+T LFN L++++L
Sbjct: 1013 LGALVGYTFLFNCLYTVAL 1031
>Os09g0333050
Length = 473
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%)
Query: 99 GSLAVLIMFVLGGFILPKDAIPKWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGK 158
GS +LI + GFIL ++ I KWW+W YW SPL YA + NE W +
Sbjct: 2 GSSCILISMLSSGFILSREEIKKWWIWGYWISPLMYALNTLAVNEFLGNSWNKTISGFSE 61
Query: 159 RLGVAVLENSGVFTNKEWYWIATGALLGFTILFNVLFSLSLMYL 202
LG VLE+ G F +WYWI GALLG+ IL NVL+++ L++L
Sbjct: 62 PLGRLVLESRGFFPEAKWYWIGVGALLGYVILLNVLYTICLIFL 105
>Os09g0332360 ABC transporter related domain containing protein
Length = 948
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%)
Query: 117 DAIPKWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEW 176
D + KW +W YW SPL YA A + NE SP W + + LG VLE+ GVF +W
Sbjct: 421 DEVKKWLIWEYWTSPLMYALNALAVNEFLSPSWNEALPGFREPLGRLVLESRGVFPEAKW 480
Query: 177 YWIATGALLGFTILFNVLFSLSLMYL 202
YWI GALLG+ +LFN+L+++ L L
Sbjct: 481 YWIGLGALLGYVLLFNILYTICLSIL 506
>AK110184
Length = 1519
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%)
Query: 3 DLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPEAS 62
+++ + P+ KH+ F FYRP FA+ +V +P + +I+ I Y+ A AS
Sbjct: 580 EMTAAFSSKPILLKHKSFSFYRPSAFAVAQTVVDVPLVFTQVVIFTLIIYFMANLARTAS 639
Query: 63 RFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIPKW 122
+FF +L+++++ FR + CRT+ V ++V I+ V G+++P ++ W
Sbjct: 640 QFFITVLILWLVTMTTYAFFRAISAFCRTIDVATRFTGISVQILIVYTGYLIPPKSMHPW 699
Query: 123 WVWAYWCSPLTYAYIAFSSNE 143
+ W W + + Y + SNE
Sbjct: 700 FSWLRWINWIQYGFECLMSNE 720
>Os11g0587600 Similar to PDR11 ABC transporter
Length = 776
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 117 DAIPKWWVWAYWCSPLTYAYIAFSSNEMHSPRW----MDKFVPDGKRLGVAVLENSGVFT 172
D I WW+W YW SP+ Y+ A S NE + RW D + D +G A+L++ G+ T
Sbjct: 13 DDIKPWWIWGYWASPMMYSQQAISINEFLASRWAIPNTDATI-DEPTVGKAILKSKGLIT 71
Query: 173 NKEWYWIATGALLGFTILFNVLFSLSLMYLN 203
+ +WI+ GAL+GF ++FN+L+ L+L YL+
Sbjct: 72 SDGGFWISIGALIGFLVVFNILYILALTYLS 102
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.331 0.142 0.473
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,614,872
Number of extensions: 259353
Number of successful extensions: 686
Number of sequences better than 1.0e-10: 22
Number of HSP's gapped: 665
Number of HSP's successfully gapped: 29
Length of query: 205
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 109
Effective length of database: 12,023,257
Effective search space: 1310535013
Effective search space used: 1310535013
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 153 (63.5 bits)