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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0512700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to PDR9 ABC transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.37 (0.0344) R2 : 7.76e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0136 (0.0725) R2dN8 : 1e-04 R2N8 : 7.76e-05
σ : 0.648
deviance : 192.89
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.72 0.63 3.34 0.00737 0.177 -0.574 0.0965 -0.605 0.119 13.2 65 809 -- --
180.27 0.625 3.34 -0.00937 0.183 -0.617 -0.00311 -- 0.126 13.2 65 805 -- --
179.75 0.624 3.34 0.00857 0.178 -0.576 -- -0.567 0.12 13.2 64.97 808 -- --
180.27 0.625 3.34 -0.00798 0.184 -0.616 -- -- 0.126 13.2 64.97 805 -- --
181.45 0.627 3.34 0.0105 -- -0.537 -- -0.633 0.107 -- 65 781 -- --
189.85 0.646 3.37 0.0696 0.221 -- 0.371 -- 0.0243 17.4 -- -- -- --
190.18 0.646 3.37 0.0689 0.223 -- -- -- 0.026 17.2 -- -- -- --
182.08 0.628 3.35 -0.00617 -- -0.585 -- -- 0.113 -- 64.88 771 -- --
180.27 0.625 3.34 -- 0.184 -0.615 -- -- 0.127 13.2 64.95 805 -- --
192.79 0.649 3.37 0.0611 -- -- -- -- 0.0204 -- -- -- -- --
190.31 0.645 3.37 -- 0.222 -- -- -- 0.0184 17.2 -- -- -- --
182.07 0.628 3.35 -- -- -0.586 -- -- 0.113 -- 64.66 767 -- --
192.89 0.648 3.37 -- -- -- -- -- 0.0136 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 176.89 temperature 25.0 90 > th dose dependent rect. 7 4
10 178.13 temperature 30.0 720 < th dose independent rect. 13 13
13 178.26 temperature 30.0 720 < th dose independent rect. 14 1
14 178.26 wind 1.0 1440 < th dose dependent rect. 6 1
15 178.28 temperature 30.0 720 < th dose independent rect. 13 16
17 178.33 humidity 90.0 43200 < th dose dependent rect. 5 1
18 178.38 temperature 30.0 720 > th dose independent rect. 15 1
19 178.38 temperature 30.0 720 < th dose independent rect. 13 22
21 178.41 wind 1.0 10 < th dose independent rect. 14 8
23 178.43 temperature 30.0 720 < th dose independent rect. 13 7
25 178.48 radiation 10.0 43200 < th dose dependent rect. 9 4
26 178.50 humidity 50.0 43200 > th dose independent rect. 14 1
27 178.52 humidity 50.0 43200 < th dose independent rect. 14 1
32 178.59 radiation 10.0 43200 > th dose independent rect. 11 2
39 178.68 temperature 25.0 270 > th dose independent rect. 6 5
40 178.70 precipitation 0.1 43200 > th dose dependent rect. 19 2
45 178.82 wind 1.0 10 < th dose independent rect. 17 5
48 178.85 temperature 25.0 90 > th dose dependent rect. 20 15
49 178.86 humidity 70.0 720 < th dose dependent rect. 15 1
51 178.88 temperature 25.0 90 > th dose dependent sin 6 NA
54 178.93 temperature 30.0 43200 > th dose dependent rect. 8 1
71 178.96 radiation 10.0 43200 > th dose independent rect. 9 7
76 179.01 radiation 1.0 4320 < th dose independent rect. 15 1
79 179.02 radiation 1.0 4320 > th dose independent rect. 15 1
81 179.04 radiation 10.0 1440 < th dose dependent rect. 6 2
84 179.07 temperature 30.0 43200 < th dose independent rect. 19 14
85 179.07 atmosphere 1000.0 30 > th dose independent rect. 11 23
91 179.09 wind 3.0 43200 < th dose dependent rect. 6 2
92 179.10 temperature 30.0 43200 > th dose independent rect. 8 1
96 179.10 temperature 30.0 43200 < th dose independent rect. 5 4
108 179.12 temperature 30.0 43200 < th dose independent rect. 7 2
110 179.12 temperature 30.0 43200 < th dose independent rect. 22 11
113 179.13 temperature 30.0 43200 < th dose independent rect. 3 6
115 179.13 wind 1.0 43200 < th dose dependent rect. 3 22
118 179.14 temperature 30.0 43200 < th dose independent rect. 1 8
122 179.15 humidity 50.0 720 < th dose dependent rect. 15 3
157 179.26 wind 1.0 10 < th dose dependent rect. 13 9
159 179.28 wind 9.0 43200 > th dose dependent rect. 13 1
166 179.33 wind 1.0 43200 < th dose dependent rect. 5 23
173 179.37 temperature 30.0 43200 > th dose dependent rect. 18 1
188 179.38 precipitation 0.1 43200 > th dose independent rect. 22 2
190 179.38 precipitation 0.1 43200 > th dose dependent rect. 22 2
211 179.42 temperature 30.0 720 < th dose independent rect. 13 4
224 179.50 radiation 40.0 43200 > th dose independent rect. 14 1
230 179.52 humidity 60.0 10 > th dose independent rect. 10 1
235 179.54 wind 1.0 10 < th dose dependent rect. 17 5
237 179.55 radiation 10.0 10 > th dose independent rect. 10 1
239 179.55 temperature 20.0 10 > th dose dependent rect. 10 1
264 179.58 wind 1.0 43200 < th dose dependent rect. 20 22
268 179.60 atmosphere 1010.0 10 < th dose independent rect. 10 1
273 179.62 precipitation 0.1 43200 < th dose independent rect. 22 2
274 179.62 radiation 10.0 10 < th dose independent rect. 22 12
275 179.62 atmosphere 1015.0 30 < th dose dependent rect. 10 1
276 179.62 precipitation 0.1 43200 < th dose dependent rect. 22 2
280 179.63 radiation 30.0 10 < th dose independent rect. 10 1
299 179.65 temperature 25.0 10 > th dose independent rect. 10 1
304 179.66 humidity 50.0 30 > th dose dependent rect. 10 1
306 179.66 wind 1.0 43200 < th dose dependent rect. 14 23
307 179.67 wind 5.0 10 < th dose independent rect. 10 1
327 179.67 wind 1.0 43200 < th dose dependent no NA NA
333 179.68 wind 7.0 10 < th dose dependent rect. 10 1
353 179.71 temperature 30.0 30 < th dose independent rect. 10 1
359 179.73 wind 1.0 30 > th dose independent rect. 10 1
360 179.73 temperature 10.0 30 > th dose independent rect. 10 1
363 179.73 humidity 90.0 30 < th dose independent rect. 10 1
364 179.73 atmosphere 995.0 30 > th dose independent rect. 10 1
367 179.73 precipitation 0.1 30 < th dose independent rect. 10 1
368 179.73 temperature 10.0 30 > th dose independent rect. 11 23
370 179.73 precipitation 0.1 30 < th dose dependent rect. 10 1
371 179.74 wind 1.0 30 < th dose independent rect. 10 1
372 179.74 temperature 10.0 1440 > th dose independent rect. 11 1
377 179.74 atmosphere 995.0 1440 > th dose independent rect. 11 1
380 179.74 precipitation 0.1 1440 < th dose independent rect. 11 1
382 179.74 temperature 10.0 1440 > th dose independent rect. 12 23
385 179.74 wind 1.0 30 < th dose dependent rect. 10 1
386 179.74 precipitation 0.1 1440 < th dose dependent rect. 11 1
391 179.75 precipitation 0.1 43200 > th dose dependent rect. 2 2
413 179.77 radiation 1.0 30 > th dose dependent rect. 10 1
414 179.77 radiation 40.0 30 < th dose dependent rect. 10 1
415 179.77 wind 3.0 43200 < th dose dependent rect. 4 12
419 179.78 atmosphere 995.0 30 > th dose dependent rect. 10 1
425 179.80 humidity 90.0 30 < th dose dependent rect. 10 1
431 179.81 humidity 70.0 720 < th dose dependent rect. 10 7
437 179.82 humidity 70.0 720 < th dose independent rect. 16 2
439 179.82 precipitation 0.1 1440 < th dose independent rect. 7 5
440 179.82 precipitation 0.1 1440 < th dose dependent rect. 7 5
451 179.85 humidity 70.0 1440 > th dose independent rect. 17 1
458 179.87 wind 9.0 43200 < th dose independent rect. 13 1
460 179.87 wind 1.0 43200 > th dose independent rect. 5 8
462 179.87 wind 1.0 43200 < th dose dependent rect. 5 8
463 179.87 wind 1.0 43200 < th dose dependent rect. 11 23
465 179.88 wind 1.0 10 < th dose independent rect. 21 1
478 179.88 temperature 30.0 720 < th dose independent rect. 23 17
480 179.88 wind 1.0 10 < th dose dependent rect. 21 1
498 179.89 wind 1.0 43200 < th dose independent rect. 15 22
501 179.90 humidity 50.0 720 > th dose independent rect. 11 9
503 179.90 wind 1.0 43200 < th dose independent rect. 19 21
506 179.90 wind 1.0 43200 < th dose dependent rect. 5 17
508 179.91 precipitation 0.1 43200 > th dose independent rect. 19 12
513 179.92 radiation 10.0 43200 > th dose independent sin 0 NA
518 179.92 wind 1.0 43200 < th dose dependent rect. 9 23
520 179.93 radiation 10.0 1440 < th dose dependent rect. 3 6
521 179.93 radiation 10.0 1440 < th dose dependent rect. 1 8
524 179.94 wind 1.0 43200 > th dose independent rect. 6 4
525 179.94 precipitation 0.1 43200 < th dose independent rect. 19 12
529 179.94 precipitation 0.1 43200 < th dose dependent rect. 19 12
535 179.95 radiation 10.0 43200 > th dose independent rect. 17 23
539 179.95 wind 1.0 43200 < th dose dependent rect. 6 6
541 179.95 radiation 10.0 1440 < th dose dependent rect. 23 10
550 179.96 precipitation 0.1 43200 > th dose dependent rect. 22 8
568 179.97 wind 1.0 43200 > th dose independent rect. 20 20
593 179.99 wind 1.0 43200 > th dose independent rect. 20 17
598 179.99 radiation 10.0 1440 < th dose dependent rect. 19 14
612 180.02 wind 1.0 43200 < th dose independent rect. 5 8
632 180.04 precipitation 0.1 43200 < th dose independent rect. 22 8
635 180.04 radiation 10.0 43200 > th dose independent rect. 16 21
639 180.04 precipitation 0.1 43200 < th dose dependent rect. 22 8
643 180.05 precipitation 0.1 43200 > th dose independent rect. 22 8
646 180.05 wind 1.0 43200 < th dose independent rect. 8 23
647 180.05 wind 1.0 43200 < th dose independent rect. 17 23
648 180.05 wind 1.0 43200 < th dose dependent sin 1 NA
668 180.06 wind 1.0 43200 < th dose independent rect. 19 18
676 180.07 precipitation 0.1 43200 > th dose independent rect. 21 10
688 180.08 radiation 10.0 1440 < th dose independent rect. 17 16
707 180.10 atmosphere 1000.0 90 < th dose independent rect. 19 5
728 180.12 humidity 50.0 720 < th dose dependent sin 12 NA
729 180.12 humidity 90.0 14400 > th dose dependent rect. 9 1
734 180.13 radiation 10.0 1440 > th dose independent rect. 6 3
739 180.13 wind 1.0 30 > th dose dependent rect. 10 1
741 180.13 wind 9.0 10 < th dose dependent rect. 7 15
769 180.14 wind 1.0 43200 < th dose independent rect. 10 23
774 180.15 atmosphere 1000.0 10 < th dose independent rect. 22 2
778 180.15 wind 1.0 43200 < th dose independent rect. 3 23
787 180.16 precipitation 0.1 43200 > th dose dependent rect. 19 12
792 180.17 wind 1.0 43200 < th dose independent rect. 5 23
793 180.17 wind 1.0 43200 < th dose independent rect. 24 23
820 180.20 humidity 70.0 720 < th dose dependent sin 20 NA
867 180.24 wind 9.0 43200 > th dose independent rect. 13 1
896 180.25 radiation 10.0 1440 < th dose independent rect. 3 6
897 180.25 radiation 10.0 1440 < th dose independent rect. 1 8
926 180.26 wind 3.0 14400 < th dose dependent rect. 3 5
938 180.27 radiation 10.0 1440 < th dose independent rect. 23 10
946 180.27 humidity 50.0 720 > th dose independent rect. 8 15
952 180.27 humidity 60.0 14400 > th dose independent rect. 15 19
979 180.28 radiation 10.0 1440 < th dose independent rect. 7 2
986 180.28 wind 1.0 43200 > th dose independent rect. 11 22
988 180.28 precipitation 0.1 30 < th dose independent rect. 11 23
998 180.28 precipitation 0.1 30 < th dose dependent rect. 11 23
999 180.29 temperature 30.0 720 < th dose independent sin 15 NA
1000 180.29 radiation 10.0 43200 > th dose independent no NA NA