Os01g0724500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter).
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Os01g0724500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.53 | 0.4 | 8.29 | 1.02 | 0.449 | 0.455 | -0.461 | 1.49 | 0.649 | 22.2 | 0.3179 | 5298 | -- | -- |
| 71.61 | 0.394 | 8.33 | 0.873 | 0.464 | 0.748 | -0.381 | -- | 0.634 | 22.3 | 0.6855 | 17226 | -- | -- |
| 73.35 | 0.399 | 8.29 | 1.03 | 0.448 | 0.443 | -- | 1.54 | 0.65 | 22.2 | 0.2995 | 5369 | -- | -- |
| 71.79 | 0.395 | 8.3 | 0.935 | 0.465 | 0.777 | -- | -- | 0.683 | 22.5 | 0.4648 | 17223 | -- | -- |
| 85.67 | 0.431 | 8.27 | 1.05 | -- | 0.415 | -- | 1.59 | 0.649 | -- | 0.3555 | 5310 | -- | -- |
| 85.39 | 0.433 | 8.33 | 1.22 | 0.457 | -- | -0.397 | -- | 0.588 | 22.3 | -- | -- | -- | -- |
| 86.01 | 0.434 | 8.33 | 1.24 | 0.458 | -- | -- | -- | 0.589 | 22.4 | -- | -- | -- | -- |
| 85.13 | 0.43 | 8.3 | 0.932 | -- | 0.783 | -- | -- | 0.691 | -- | 0.472 | 17273 | -- | -- |
| 82.31 | 0.423 | 8.31 | -- | 0.454 | 1.05 | -- | -- | 0.68 | 22.5 | 1.213 | 32762 | -- | -- |
| 98.84 | 0.465 | 8.32 | 1.25 | -- | -- | -- | -- | 0.59 | -- | -- | -- | -- | -- |
| 126.49 | 0.526 | 8.36 | -- | 0.466 | -- | -- | -- | 0.451 | 22.6 | -- | -- | -- | -- |
| 95.5 | 0.455 | 8.3 | -- | -- | 1.03 | -- | -- | 0.653 | -- | 1.201 | 32695 | -- | -- |
| 139.84 | 0.552 | 8.35 | -- | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 2 | 72.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 8 | 72.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 10 | 72.07 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 23 | NA |
| 13 | 72.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 14 | 72.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 38 | 72.16 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 18 | NA |
| 93 | 72.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 100 | 72.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 104 | 72.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 120 | 72.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 10 |
| 148 | 72.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 150 | 72.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 15 |
| 157 | 72.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 158 | 72.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 202 | 72.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 15 |
| 211 | 72.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 213 | 72.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 214 | 72.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 17 |
| 217 | 72.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 17 |
| 232 | 72.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 234 | 72.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 257 | 72.47 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 267 | 72.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 292 | 72.50 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 17 |
| 315 | 72.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 317 | 72.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 320 | 72.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 321 | 72.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 324 | 72.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 330 | 72.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 338 | 72.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 339 | 72.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 343 | 72.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 344 | 72.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 346 | 72.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 347 | 72.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 380 | 72.68 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 386 | 72.68 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 393 | 72.69 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 597 | 73.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 601 | 73.06 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 688 | 73.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 718 | 73.29 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 748 | 73.37 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 759 | 73.39 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 770 | 73.41 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 839 | 73.52 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 855 | 73.54 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 906 | 73.61 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 918 | 73.63 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 978 | 73.69 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |