BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0643300 Os01g0643300|AK063976
(589 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0643300 Similar to Auxin efflux carrier protein 1052 0.0
Os02g0743400 Auxin transport protein REH1 666 0.0
Os06g0232300 Similar to Auxin transport protein REH1 662 0.0
Os11g0137000 Similar to PIN1-like auxin transport protein 579 e-165
Os06g0660200 Similar to Auxin efflux carrier protein 362 e-100
Os12g0133800 Similar to Auxin efflux carrier protein 294 1e-79
Os01g0715600 Similar to Auxin efflux carrier component 2 (A... 203 3e-52
Os08g0529000 Similar to Auxin efflux carrier component 1 (P... 180 2e-45
Os01g0919800 Similar to Efflux carrier of polar auxin trans... 178 1e-44
Os01g0802700 Auxin Efflux Carrier family protein 170 2e-42
Os09g0505400 Auxin Efflux Carrier family protein 154 2e-37
Os11g0122800 111 1e-24
>Os01g0643300 Similar to Auxin efflux carrier protein
Length = 589
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/589 (89%), Positives = 530/589 (89%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
Query: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHV 180
IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHV
Sbjct: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHV 180
Query: 181 DPDVVSLEGGHAETEAEVAADGRLHXXXXXXXXXXXXXXXXPRPSNLTGAEIYSLSSSRN 240
DPDVVSLEGGHAETEAEVAADGRLH PRPSNLTGAEIYSLSSSRN
Sbjct: 181 DPDVVSLEGGHAETEAEVAADGRLHVTVRRSSVSRRSLLVTPRPSNLTGAEIYSLSSSRN 240
Query: 241 PTPRGSNFNHADFFAMVXXXXXXXXXAAVRGSSFGASELYSLQSSRGPTPRQSNFDEHSA 300
PTPRGSNFNHADFFAMV AAVRGSSFGASELYSLQSSRGPTPRQSNFDEHSA
Sbjct: 241 PTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGASELYSLQSSRGPTPRQSNFDEHSA 300
Query: 301 RPPKPPATTTGALNHDAKELHMFXXXXXXXXXXXXXGLPVFSXXXXXXALDVGAKEIHMV 360
RPPKPPATTTGALNHDAKELHMF GLPVFS ALDVGAKEIHMV
Sbjct: 301 RPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSGLPVFSGGGGGGALDVGAKEIHMV 360
Query: 361 IPADLPQNNGSGKEHEEYGAVALXXXXXXENFSSTAELHPKVVDVDGPNXXXXXXXXXQY 420
IPADLPQNNGSGKEHEEYGAVAL ENFSSTAELHPKVVDVDGPN QY
Sbjct: 361 IPADLPQNNGSGKEHEEYGAVALGGGGGGENFSSTAELHPKVVDVDGPNAGGGAAGAGQY 420
Query: 421 QMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDA 480
QMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDA
Sbjct: 421 QMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDA 480
Query: 481 GLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAI 540
GLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAI
Sbjct: 481 GLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAI 540
Query: 541 VQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
VQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL
Sbjct: 541 VQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
>Os02g0743400 Auxin transport protein REH1
Length = 595
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/636 (58%), Positives = 426/636 (66%), Gaps = 88/636 (13%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+ DFY VM A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
TN+PY MNLRF+AADTLQKL+VLA L AWS L SR G+ L+W+ITLFSLSTLPNTLVMG
Sbjct: 61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHL-SRRGS--LEWTITLFSLSTLPNTLVMG 117
Query: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHV 180
IPLL MYG +SGSLMVQIVVLQCIIWYTLMLF+FE+R ARMLI +QFPDTAA+I S+ V
Sbjct: 118 IPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAANIASIVV 177
Query: 181 DPDVVSLEGGHA--ETEAEVAADGRLHXXXXXXXXXXXX---------XXXXPRPSNLTG 229
DPDVVSL+G ETE EV DGR+H PRPSNLT
Sbjct: 178 DPDVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTN 237
Query: 230 AEIYSLSSSRNPTPRGSNFNHADFFAMVXXXXXXXXXAAVRGSSFGASELYSLQSSRGPT 289
AEIYSL SSRNPTPRGS+FNH DF++MV R S+FGA++ + +++ G T
Sbjct: 238 AEIYSLQSSRNPTPRGSSFNHTDFYSMVG-----------RSSNFGAADAFGVRT--GAT 284
Query: 290 PRQSNFDEHSARPPKP-----------------PATTT-------GALNHDAK--ELHMF 323
PR SN+++ +++P P PA ++ A N AK +LHMF
Sbjct: 285 PRPSNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSSAPKGAKKAATNGQAKGEDLHMF 344
Query: 324 XXXXXXXXXXXXXGLPVFSXXXXXXALDVGAKEIHMVIPADLPQNNGSGKEHEEYGAVAL 383
G GA + + P+ K+ E+Y
Sbjct: 345 VWSSSASPVSDVFG--------------GGAPDYNDAAAVKSPRKMDGAKDREDY----- 385
Query: 384 XXXXXXENFSSTAELHPKVVDVDGPNXXX----------XXXXXXQYQMPPASVMTRLIL 433
++FS + V+D D MPP SVMTRLIL
Sbjct: 386 ---VERDDFSFG---NRGVMDRDAEAGDEKAAAAAGADPSKAMAAPTAMPPTSVMTRLIL 439
Query: 434 IMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFM 493
IMVWRKLIRNPNTYSSL+GL WSLV FRW+ MPAIV KSISILSDAGLGMAMFSLGLFM
Sbjct: 440 IMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGLFM 499
Query: 494 ALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFV 553
ALQP IIACG A +MAVRFLAGPAVMAAAS A+GLRGTLLHVAIVQAALPQGIVPFV
Sbjct: 500 ALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIVQAALPQGIVPFV 559
Query: 554 FAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
FAKEY+VHP+ILSTAVIFGMLIALPITL+YYILLGL
Sbjct: 560 FAKEYSVHPSILSTAVIFGMLIALPITLVYYILLGL 595
>Os06g0232300 Similar to Auxin transport protein REH1
Length = 592
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/623 (58%), Positives = 418/623 (67%), Gaps = 65/623 (10%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+G DFY VM A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
TN+PY MNLRF+AADTLQKL+VLA L WS L SR G+ L+W+ITLFSLSTLPNTLVMG
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIVLALLTLWSHL-SRRGS--LEWTITLFSLSTLPNTLVMG 117
Query: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHV 180
IPLL MYG +SGSLMVQIVVLQCIIWYTLMLF+FE+R AR+LI +QFPDTA +I S+ V
Sbjct: 118 IPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVV 177
Query: 181 DPDVVSLEGGHA--ETEAEVAADGRLHXXXXXXXXXXXX---------XXXXPRPSNLTG 229
D DVVSL+G ETEAEV DG++H PRPSNLT
Sbjct: 178 DADVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTN 237
Query: 230 AEIYSLSSSRNPTPRGSNFNHADFFAMVXXXXXXXXXAAVRGSSFGASELYSLQSSRGPT 289
AEIYSL SSRNPTPRGS+FNH DF++MV R S+F A + + +++ G T
Sbjct: 238 AEIYSLQSSRNPTPRGSSFNHTDFYSMVG-----------RSSNFAAGDAFGVRT--GAT 284
Query: 290 PRQSNFDEHSARPPKPPAT---------------------TTGALNHDAKELHMFXXXXX 328
PR SN++E +A P K + A D K+LHMF
Sbjct: 285 PRPSNYEEDAAAPNKAGSKYGQYPAPNPAMAAPPKPKKAANGQAKGEDGKDLHMFVWSSS 344
Query: 329 XXXXXXXXGLPVFSXXXXXXALDVGA--KEIHMVIPADLPQNNGSGKEHEEYGAVALXXX 386
PV + A KE+ M + + G E +++ +
Sbjct: 345 AS--------PVSDVFGNGAEYNDAAAVKEVRMAVAS---PRKADGVERDDF---SFGNR 390
Query: 387 XXXENFSSTAELHPKVVDVDGPNXXXXXXXXXQYQMPPASVMTRLILIMVWRKLIRNPNT 446
E + + V G + MPP SVMTRLILIMVWRKLIRNPNT
Sbjct: 391 GVAERDAEAGDEKSVAAAVSGEHGKPGLTPAPT-AMPPTSVMTRLILIMVWRKLIRNPNT 449
Query: 447 YSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSA 506
YSSL+GL WSLV FRW+ MPAI+ KSISILSDAGLGMAMFSLGLFMALQP IIACG
Sbjct: 450 YSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMALQPRIIACGNKV 509
Query: 507 AVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILS 566
A +MAVRFL GPAVMAAASIA+GLRGTLLHVAIVQAALPQGIVPFVFAKEY+VHP ILS
Sbjct: 510 ATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPDILS 569
Query: 567 TAVIFGMLIALPITLLYYILLGL 589
TAVIFGMLIALPITL+YYILLGL
Sbjct: 570 TAVIFGMLIALPITLVYYILLGL 592
>Os11g0137000 Similar to PIN1-like auxin transport protein
Length = 554
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 347/622 (55%), Positives = 391/622 (62%), Gaps = 101/622 (16%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+ D Y V+ AVVPLYVAM LAY SVRWW IF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
TN+P+AMNLRFLAADTLQKL+VLA LA W RL +R LDW ITLFSLSTLPNTLVMG
Sbjct: 61 TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGS---LDWLITLFSLSTLPNTLVMG 117
Query: 121 IPLLIAMYGPY----SGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIV 176
IPLL MY SGSLMVQIVVLQCIIWYTLMLFLFE+R AR+L+ +QFPDTAASIV
Sbjct: 118 IPLLKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIV 177
Query: 177 SLHVDPDVVSLEGG-----HAETEAEVAADGRLHXXXXXXXXXXXXXXXXPRPSNLTGAE 231
S VD DVVSL GG + EAEV DGR+ R S + +E
Sbjct: 178 SFRVDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTV--------------RKSTSSRSE 223
Query: 232 IY----SLSSSRNPTPRGSNFNHADFFAMVXXXXXXXXXAAVRGSSFGASELYSLQSSRG 287
+ S S++ PR SN + E+YSLQSSR
Sbjct: 224 AACSHGTQSHSQSMQPRVSNLS--------------------------GVEIYSLQSSRN 257
Query: 288 PTPRQSNFDEH-------SARPPKPPATTTGALNH-------DAKELHMFXXXXXXX--- 330
PTPR S+F+ + + G H K+LHMF
Sbjct: 258 PTPRGSSFNHAEFFNIVGNGKQGDEEKGAAGGGGHSPQPVVGKRKDLHMFVWSSSASPVS 317
Query: 331 ---XXXXXXGLPVFSXXXXXXALDVGAKEIHMVIPADLPQNNGSGKEHEEYGAVALXXXX 387
+ VF GA+ + +N G + G+
Sbjct: 318 ERAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGN--KNEKDGPTLSKLGS------- 368
Query: 388 XXENFSSTAELHPKVVDVDGPNXXXXXXXXXQYQMPPASVMTRLILIMVWRKLIRNPNTY 447
+STA+L PK DG MPPASVMTRLILIMVWRKLIRNPNTY
Sbjct: 369 -----NSTAQLRPKD---DGEGMAAA--------MPPASVMTRLILIMVWRKLIRNPNTY 412
Query: 448 SSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAA 507
SSLLG+ WSLV++RW + MPAI+ +SISILSDAGLGMAMFSLGLFMALQP IIACG S A
Sbjct: 413 SSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLA 472
Query: 508 VVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILST 567
+MAVRFL GPAVMAAASIA+GLRG LLH+AIVQAALPQGIVPFVFAKEYNVHP ILST
Sbjct: 473 SYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILST 532
Query: 568 AVIFGMLIALPITLLYYILLGL 589
AVIFGMLIALPITL+YYILLGL
Sbjct: 533 AVIFGMLIALPITLVYYILLGL 554
>Os06g0660200 Similar to Auxin efflux carrier protein
Length = 630
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/369 (54%), Positives = 228/369 (61%), Gaps = 58/369 (15%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+G D Y V+AA+VPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSR-----TGAPRLDWSITLFSLSTLPN 115
TNDPY+MN RFLAAD+LQKL++LA LA W L SR A LDW+ITLFSLSTLPN
Sbjct: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
Query: 116 TLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQF-PDTAAS 174
TLVMGIPLL AMYG +SGSLMVQIVVLQ +IWYTLMLFLFE+R A+ LI++QF PD AS
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
Query: 175 IVSLHVDPDVVSLEGGHA-ETEAEVAADGRLHXX------------------XXXXXXXX 215
I S VD DVVSL G A + +AEV DGR+H
Sbjct: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGVSRAYG 240
Query: 216 XXXXXXPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVXXXXXXXXXAAVRGSSFG 275
PR SNLTG EIYSL +SR PTPR S+FN ADF+AM GS
Sbjct: 241 ASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFS------------GSKMA 288
Query: 276 ASELYSLQSSRGPTPRQSNFDEH---------SARPPKPPATTTGAL------------N 314
+ + G R DE +A PP PA G + +
Sbjct: 289 SQMASPMAQHGGAGGRAQGLDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNS 348
Query: 315 HDAKELHMF 323
+ KELHMF
Sbjct: 349 NSNKELHMF 357
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/170 (82%), Positives = 156/170 (91%)
Query: 420 YQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSD 479
+ MPP SVMTRLILIMVWRKLIRNPNTYSSL+GL WSLV+FRW++ MP+I++ SISILSD
Sbjct: 461 HPMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSD 520
Query: 480 AGLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVA 539
AGLGMAMFSLGLFMALQP II+CGK+ A +MAVRFL GPAV+AA SIAIGLRG LLHVA
Sbjct: 521 AGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVA 580
Query: 540 IVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
IVQAALPQGIVPFVFAKEYN HP ILSTAVIFGMLIALPIT+LYY+LLG+
Sbjct: 581 IVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
>Os12g0133800 Similar to Auxin efflux carrier protein
Length = 250
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/197 (78%), Positives = 166/197 (84%), Gaps = 11/197 (5%)
Query: 393 SSTAELHPKVVDVDGPNXXXXXXXXXQYQMPPASVMTRLILIMVWRKLIRNPNTYSSLLG 452
+STA+L PK DG MPPASVMTRLILIMVWRKLIRNPNTYSSLLG
Sbjct: 65 NSTAQLRPKD---DGEGRAAA--------MPPASVMTRLILIMVWRKLIRNPNTYSSLLG 113
Query: 453 LAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAAVVSMA 512
+ WSLV++RW + MPAI+ +SISILSDAGLGMAMFSLGLFMALQP IIACG S A +MA
Sbjct: 114 VIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMA 173
Query: 513 VRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFG 572
VRFL GPAVMAAASIA+GLRG LLH+AIVQAALPQGIVPFVFAKEYNVHP ILSTAVIFG
Sbjct: 174 VRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTAVIFG 233
Query: 573 MLIALPITLLYYILLGL 589
MLIALPITL+YYILLGL
Sbjct: 234 MLIALPITLVYYILLGL 250
>Os01g0715600 Similar to Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux
carrier AGR) (Polar-auxin-transport efflux component
AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1)
(AtEIR1) (WAVY6)
Length = 311
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
M+S D Y V+ A VPLYVAM LAY S++WW +FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
T DPY MN++ + +D LQK L L G AA S+ A + DW IT FSLSTLPNTL++G
Sbjct: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISK---ACCAEKFDWLITGFSLSTLPNTLIVG 117
Query: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSL 178
IPLL MYG +G L+ QIVVLQ +IWYTL+LFLFE RAA + +T I +L
Sbjct: 118 IPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWAL 175
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 107/140 (76%)
Query: 445 NTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGK 504
T S GL W+LV FRWH+ +P IV SI +LSD GLGMAMFSLGLF ALQ IIACG
Sbjct: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
Query: 505 SAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAI 564
++++A+RF GPA+M +S AIG+RG LL +AIVQAALPQGIVPFVFAKEYNV I
Sbjct: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
Query: 565 LSTAVIFGMLIALPITLLYY 584
LSTA+I GM++A+P+ L YY
Sbjct: 283 LSTAIIVGMMVAVPVALAYY 302
>Os08g0529000 Similar to Auxin efflux carrier component 1 (PIN-FORMED protein)
(AtPIN1)
Length = 370
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 111/151 (73%)
Query: 439 KLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPS 498
KL RNPN Y+S+LG+ W+ +A+RWH+S+P IV S+ ++S G GM+MFS+GLFM Q
Sbjct: 219 KLARNPNVYASVLGVVWACIAYRWHLSLPGIVTGSLQVMSRTGTGMSMFSMGLFMGQQER 278
Query: 499 IIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEY 558
+IACG + MA+RF+AGP + A+GLRG +LH+AI+QAALPQ I FVFAKEY
Sbjct: 279 VIACGAGLTALGMALRFVAGPLATLVGAAALGLRGDVLHLAIIQAALPQSIASFVFAKEY 338
Query: 559 NVHPAILSTAVIFGMLIALPITLLYYILLGL 589
+H +LSTAVIFG LI+LPI + YY +LG
Sbjct: 339 GLHADVLSTAVIFGTLISLPILIAYYAVLGF 369
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI D Y V+ A+ PLY A+ L YGSVRWW FT +QC+ IN V F++P +F F+
Sbjct: 1 MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRL---DWSITLFSLSTLPNTL 117
DP+AMN R +AAD + K + +A +AAW+R A + WSIT FSL+ L NTL
Sbjct: 61 RTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTL 120
Query: 118 VMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAA 160
V+G+PLL AMYG ++ L+VQI V+Q ++W+ L+L FE R A
Sbjct: 121 VVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKA 163
>Os01g0919800 Similar to Efflux carrier of polar auxin transport
Length = 363
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 115/151 (76%)
Query: 439 KLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPS 498
KL RNPNTY+S +G+ W+ +A R H+++P+ E S+ I+S +G GMAMFS+GLFMA Q
Sbjct: 211 KLARNPNTYASFVGITWACLANRLHIALPSAFEGSVLIMSKSGTGMAMFSMGLFMAQQEK 270
Query: 499 IIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEY 558
IIACG S A + + ++F GPA MA SIA+GLRG +L VAI+QAALPQ I F+FAKEY
Sbjct: 271 IIACGTSFAALGLVLKFALGPAAMAIGSIAVGLRGDVLRVAIIQAALPQSITSFIFAKEY 330
Query: 559 NVHPAILSTAVIFGMLIALPITLLYYILLGL 589
+H +LSTAVIFGML++LP+ + +YI+L L
Sbjct: 331 GLHADVLSTAVIFGMLVSLPLLVGFYIVLEL 361
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI D Y V+AA VPLY A+FL YGSVRWW IFT +QC +NR VA FA+P +F F
Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTL 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
DP+ +N R +AAD + K +++A + AW+R S+ G + WSIT FSLSTL N+LV+G
Sbjct: 61 HTDPFQVNYRAVAADVISKAVIVAVIGAWARFMSKGGCA-VSWSITSFSLSTLTNSLVVG 119
Query: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAA 160
+P+ AMYG ++ L+VQ+ V Q I+W TL+LF+ E R A
Sbjct: 120 VPMARAMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKA 159
>Os01g0802700 Auxin Efflux Carrier family protein
Length = 426
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 116/166 (69%), Gaps = 1/166 (0%)
Query: 424 PASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLG 483
PA M +I + V +KL++ PNTY+S LGL WSL+AF+ SMP IVE S+ + +G
Sbjct: 262 PAPSMKHVIWMAV-KKLLQIPNTYASFLGLIWSLIAFKCGFSMPKIVEDSLFTIRTTAVG 320
Query: 484 MAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQA 543
++MFS G F+A Q + CG A SM ++FL GP VM AS+ IG+ GTLLH+A+VQA
Sbjct: 321 LSMFSSGTFIARQSRFVPCGYKIASFSMVIKFLIGPVVMLFASLVIGMHGTLLHIAVVQA 380
Query: 544 ALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
ALP + FV+A+EY VH I+ST VI G+ I+LP+T++YYILLGL
Sbjct: 381 ALPLAVTSFVYAEEYKVHADIMSTGVILGIFISLPVTIVYYILLGL 426
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 115/169 (68%), Gaps = 13/169 (7%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+G + Y V+ A+ PLY A L YGSVRW F+ +QC+GIN FVA++AVP+L F +S
Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS 60
Query: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTG------------APRLDWSITLF 108
TN+ Y MN R +AADTLQK ++L GL AW+ L R+ + L W IT F
Sbjct: 61 TNNVYKMNGRLIAADTLQKAVLLLGLMAWA-LWERSRARGAGAKAKAAVSSPLQWVITCF 119
Query: 109 SLSTLPNTLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEF 157
S+++LPNT++MG+PLL MYGP S LM QIVV+Q IWY +++FL+E+
Sbjct: 120 SVASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYNVIIFLYEY 168
>Os09g0505400 Auxin Efflux Carrier family protein
Length = 398
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 116/197 (58%), Gaps = 43/197 (21%)
Query: 436 VWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMAL 495
VW K+ RNPN Y+ +LG+AW+ V RWHV P+I+E S+ I+S G+G++MFS+GLFMAL
Sbjct: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
Query: 496 QPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIV-------------- 541
Q II CG V+ MA+RF+AGPA A + A+GLRG LL +AI+
Sbjct: 260 QDKIIVCGAGLTVLGMALRFVAGPAATAVGAFALGLRGDLLRLAIIQAYTHLHEIHSPSS 319
Query: 542 -----------------------------QAALPQGIVPFVFAKEYNVHPAILSTAVIFG 572
QAALPQ I FVFAKEY +H ILSTAVIFG
Sbjct: 320 FFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFVFAKEYGLHAEILSTAVIFG 379
Query: 573 MLIALPITLLYYILLGL 589
L +LP+ ++YYI+LG
Sbjct: 380 TLASLPVLIVYYIVLGF 396
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 95/153 (62%), Gaps = 10/153 (6%)
Query: 16 PLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNLRFLAAD 75
PLY A+ L YGSVRWW +FT DQC +NR VA FAVP +F F + DP+A++ R LAAD
Sbjct: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVACFAVPFFAFDFAARIDPFALSYRVLAAD 62
Query: 76 TLQKLLVLAGLAAWSRLPSRTGA----------PRLDWSITLFSLSTLPNTLVMGIPLLI 125
L KL V LAA + S W IT FSL+TL NTLV+G+PLL
Sbjct: 63 ALSKLAVALALAACAAAASTRCCGSGGGKRGGGGGFSWCITGFSLATLNNTLVVGVPLLD 122
Query: 126 AMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFR 158
AMYG ++ L+VQI V+Q I+++ L+L FE R
Sbjct: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
>Os11g0122800
Length = 603
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAY-GSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFI 59
MI D +++A+ PLY A+ L Y S RWW IFT + I VA FA+P +F F
Sbjct: 12 MIGWVDIGKILSAIAPLYFALVLGYCSSKRWWRIFTAEDSEAI--MVAWFALPFFTFEFT 69
Query: 60 STNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGA---PRLDWSITLFSLSTLPNT 116
DPY + +AAD++ KL+++ + L R +DW I+ FSL++L N+
Sbjct: 70 LHLDPYNVRYSLIAADSISKLIIVIVIGIGVGLIFRKEGLCTAVIDWCISGFSLASLTNS 129
Query: 117 LVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIV 176
LV+G+P+ AMYG ++G ++VQ+ + Q I+W T ++ + E R A ++D ++
Sbjct: 130 LVVGVPMARAMYGNWAGQVVVQLSIFQAIVWLTSLMVVLEVRKA--FVSDAHDESNRHEE 187
Query: 177 SLHVDPDVVSLEGGHAE 193
++D D V G +E
Sbjct: 188 GSYIDDDTVVGGSGTSE 204
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 1 MISGHDFYTVMAAVVPLYVAMFLAY-GSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFI 59
MI D +++A+ LY A+ L Y S RWW IFT + INR V FA P +F F
Sbjct: 355 MIGWVDIGKILSAITLLYFALALGYCSSRRWWQIFTAEDSEAINRMVVWFAFPFFTFEFT 414
Query: 60 STNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRT---GAPRLDWSITLFSLSTLPNT 116
DPY + +AAD++ KL+++A ++ L R A DW I+ FSL++L N+
Sbjct: 415 LHLDPYNVRCSLIAADSIAKLIIVAAISIGVMLKFRKEGLCAAVTDWCISGFSLASLTNS 474
Query: 117 LVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIV 176
LV+G+P+ AMYG ++G ++VQ+ + Q I+W T ++ + E R A ++D ++ +
Sbjct: 475 LVVGMPMARAMYGNWAGQIVVQLSIFQAIVWLTSLVVVLEVRKA--FVSDAHDESNSYEE 532
Query: 177 SLHVDPDVVSLEGGHAE 193
+D D V G +E
Sbjct: 533 GSFIDDDTVVGSSGTSE 549
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,746,344
Number of extensions: 661474
Number of successful extensions: 2520
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2483
Number of HSP's successfully gapped: 23
Length of query: 589
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 483
Effective length of database: 11,501,117
Effective search space: 5555039511
Effective search space used: 5555039511
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 159 (65.9 bits)