BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0328300 Os01g0328300|AK071771
(122 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0328300 Cyclin-like F-box domain containing protein 249 3e-67
Os01g0327900 Protein of unknown function DUF295 family protein 228 1e-60
Os01g0327700 Protein of unknown function DUF295 family protein 197 2e-51
Os11g0593100 Protein of unknown function DUF295 family protein 96 4e-21
Os11g0593700 Protein of unknown function DUF295 family protein 93 5e-20
Os03g0802150 ATP:guanido phosphotransferase family protein 85 9e-18
Os11g0598000 Protein of unknown function DUF295 family protein 83 5e-17
Os11g0582700 Protein of unknown function DUF295 family protein 82 6e-17
Os11g0574500 82 7e-17
Os03g0720400 Protein of unknown function DUF295 family protein 81 1e-16
Os12g0153400 79 5e-16
Os12g0152200 Protein of unknown function DUF295 family protein 79 5e-16
Os11g0579600 Protein of unknown function DUF295 family protein 73 5e-14
Os11g0593600 Protein of unknown function DUF295 family protein 73 5e-14
Os11g0584100 Protein of unknown function DUF295 family protein 70 4e-13
Os08g0426100 69 6e-13
Os11g0593400 67 4e-12
Os11g0593500 Protein of unknown function DUF295 family protein 66 6e-12
Os11g0572000 64 3e-11
>Os01g0328300 Cyclin-like F-box domain containing protein
Length = 122
Score = 249 bits (636), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MEQVSSSVTGELLEHEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASY 60
MEQVSSSVTGELLEHEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASY
Sbjct: 1 MEQVSSSVTGELLEHEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASY 60
Query: 61 LEACRLGICSNNPGPCLVFSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
LEACRLGICSNNPGPCLVFSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG
Sbjct: 61 LEACRLGICSNNPGPCLVFSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
Query: 121 AV 122
AV
Sbjct: 121 AV 122
>Os01g0327900 Protein of unknown function DUF295 family protein
Length = 419
Score = 228 bits (580), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/121 (92%), Positives = 114/121 (94%), Gaps = 1/121 (0%)
Query: 1 MEQVSSS-VTGELLEHEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHAS 59
MEQVSSS VTGELLE EAPPSTPGLDWSQLPADLLI I GTLEI DIFSSGVVCRSWHAS
Sbjct: 1 MEQVSSSSVTGELLEQEAPPSTPGLDWSQLPADLLIRIFGTLEITDIFSSGVVCRSWHAS 60
Query: 60 YLEACRLGICSNNPGPCLVFSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSH 119
YLEA RLGICSNNPGPCLVFSSSDRDPS+ TLHSLTTGKD+YVTMPDPPFRTRYIVGSSH
Sbjct: 61 YLEARRLGICSNNPGPCLVFSSSDRDPSVATLHSLTTGKDYYVTMPDPPFRTRYIVGSSH 120
Query: 120 G 120
G
Sbjct: 121 G 121
>Os01g0327700 Protein of unknown function DUF295 family protein
Length = 463
Score = 197 bits (500), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 1 MEQVSSSVTGELLEHEAP-PSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHAS 59
MEQ SSSVT ELL+ EAP PST +DWSQLPADLL+ I G L+IPDIFSSGVVCR+W AS
Sbjct: 1 MEQASSSVTAELLQQEAPYPSTSDVDWSQLPADLLVHIFGMLDIPDIFSSGVVCRAWCAS 60
Query: 60 YLEACRLGICSNNPGPCLVFSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSH 119
+LEA RLGICS NPGPCLVFSS DRDP++ TL+SLTTGK++YVTMPDPPFR+RYIVGSSH
Sbjct: 61 FLEARRLGICSGNPGPCLVFSSGDRDPTVATLYSLTTGKEYYVTMPDPPFRSRYIVGSSH 120
Query: 120 G 120
G
Sbjct: 121 G 121
>Os11g0593100 Protein of unknown function DUF295 family protein
Length = 463
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFS-SSD 83
DWS LPADLL+ ++ +L IPD+F +G C SW+A+Y A R I + PCL++S D
Sbjct: 32 DWSALPADLLLTVMESLAIPDLFRAGTACASWYAAYSIARRARIPIRDSAPCLLYSGEGD 91
Query: 84 RDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
DPS TL+S ++G V +PDPP R+R +VGS+HG
Sbjct: 92 DDPSKATLYSPSSGDCFRVRLPDPPLRSRNLVGSAHG 128
>Os11g0593700 Protein of unknown function DUF295 family protein
Length = 423
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDR 84
DWS LP D++I ++G LEIPD+ S+G VC SW A+ R+ + PCL++S
Sbjct: 5 DWSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRAACTAVRRVRFPITDKSPCLLYSCEAD 64
Query: 85 DPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHGAV 122
DP + T +S + V +P PPFR RY VGS HG +
Sbjct: 65 DPDLATFYSPSNNATFKVRLPGPPFRRRYTVGSDHGWI 102
>Os03g0802150 ATP:guanido phosphotransferase family protein
Length = 463
Score = 85.1 bits (209), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%)
Query: 19 PSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLV 78
PS + LP DLL+ IL LEIPD+ + VC SWH++Y LG + PCL
Sbjct: 45 PSMVEAELPHLPEDLLVQILSRLEIPDLLRASSVCSSWHSAYTTLHSLGQYKRHQTPCLF 104
Query: 79 FSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
++S ++ ++SL + + +T+PDPP R RY++GSS G
Sbjct: 105 YTSESAGKNVGCIYSLAEQRTYKITLPDPPIRDRYLIGSSDG 146
>Os11g0598000 Protein of unknown function DUF295 family protein
Length = 326
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%)
Query: 28 QLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDRDPS 87
+LP D+L+ I TLEI D+ +G VC SW ++Y C LG C PCL+++
Sbjct: 2 ELPQDILMSIFSTLEILDLIRAGSVCNSWRSAYTSICSLGHCKPQQTPCLLYTFESDSTK 61
Query: 88 ITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHGAV 122
T L+SL K + +T+ DP +R+I+GSSHG +
Sbjct: 62 ATGLYSLAEKKAYMLTLLDPALPSRFIIGSSHGWI 96
>Os11g0582700 Protein of unknown function DUF295 family protein
Length = 492
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 60/93 (64%)
Query: 28 QLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDRDPS 87
+L D+L+ I LEIPD+ +G VC SW ++Y E LGI + PCL+++S S
Sbjct: 93 ELSQDILMEIFALLEIPDLVRAGSVCNSWLSAYNELRSLGIYKLSQTPCLLYTSESAGDS 152
Query: 88 ITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
+ L+SL +++ +T+P+PP R+R+++GSS G
Sbjct: 153 VVCLYSLVEKREYKITLPEPPIRSRFLIGSSLG 185
>Os11g0574500
Length = 427
Score = 82.4 bits (202), Expect = 7e-17, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 28 QLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDRDPS 87
+LP D+L+ I LE+PD+ +G VC SW ASY+ C+LG PCL+++S +
Sbjct: 27 ELPQDVLMEIFALLEVPDLVRAGSVCSSWRASYISLCKLGGYRQAQTPCLLYTSESAGEN 86
Query: 88 ITTLHSLTTGKDHYVTMPDPPFRTRYI 114
+ L+SL + + +TMPDPP R+R +
Sbjct: 87 VACLYSLAEKRAYKLTMPDPPIRSRLL 113
>Os03g0720400 Protein of unknown function DUF295 family protein
Length = 468
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 60/93 (64%)
Query: 28 QLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDRDPS 87
+L D+L+ I LEIPD+ +G VC SW ++Y LGI + PCL+++S S
Sbjct: 64 ELHQDILMEIFALLEIPDLVRAGSVCNSWRSAYNGMRSLGIYKLSQTPCLLYTSESAGDS 123
Query: 88 ITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
+ +L+SL +++ +T+P+PP R+R+++GSS G
Sbjct: 124 VVSLYSLVEKREYKITLPEPPVRSRFLIGSSLG 156
>Os12g0153400
Length = 419
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDR 84
DWS+LPAD+L +L LE PD+F S VC+ W A+ + RLG+ S PCL+++++
Sbjct: 8 DWSELPADVLGLVLLELEFPDLFRSAAVCKLWRATARDIRRLGLYSRAQTPCLLYTTAAA 67
Query: 85 DPSITTLHSLTTGKDHY-VTMPDPPFRTRYIVGSSHG 120
P L+SL Y V +PDPP R+IVGSSHG
Sbjct: 68 GPRAAVLYSLADKTTSYTVPLPDPPIAERHIVGSSHG 104
>Os12g0152200 Protein of unknown function DUF295 family protein
Length = 419
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDR 84
DWS+LPAD+L +L LE PD+F S VC+ W A+ + RLG+ S PCL+++++
Sbjct: 8 DWSELPADVLGLVLLELEFPDLFRSAAVCKLWRATARDIRRLGLYSRAQTPCLLYTTAAA 67
Query: 85 DPSITTLHSLTTGKDHY-VTMPDPPFRTRYIVGSSHG 120
P L+SL Y V +PDPP R+IVGSSHG
Sbjct: 68 GPRAAVLYSLADKTTSYTVPLPDPPIAERHIVGSSHG 104
>Os11g0579600 Protein of unknown function DUF295 family protein
Length = 404
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 37 ILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDRDPSITTLHSLTT 96
I TLEI D+ +G VC SW ++Y C LG C PCL+++ T L+SL
Sbjct: 1 IFSTLEILDLIRAGSVCNSWRSAYTSICSLGHCKPQQTPCLLYTFESDGTKATGLYSLAE 60
Query: 97 GKDHYVTMPDPPFRTRYIVGSSHGAV 122
K + +T+ DP +R+I+GSSHG +
Sbjct: 61 KKAYMLTLLDPALPSRFIIGSSHGWI 86
>Os11g0593600 Protein of unknown function DUF295 family protein
Length = 425
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFS--SS 82
DW+ LP D+L ++ L IPD+ ++G VC SW ++Y + RL I + PCL++S +
Sbjct: 7 DWTSLPDDILFLVMRKLGIPDLLNAGAVCSSWRSTY-TSLRLPI--TDKSPCLLYSCDAD 63
Query: 83 DRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHGAV 122
D + T++S ++G + +P P FR RY+VGS HG V
Sbjct: 64 ADDDDVATVYSPSSGATFKLRLPSPAFRRRYMVGSDHGWV 103
>Os11g0584100 Protein of unknown function DUF295 family protein
Length = 496
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 15 HEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPG 74
H P T D +L D+L+ I LEIPD+ +G VC+SW ++Y +G
Sbjct: 45 HPPPMETQAADLPELSQDMLMEIFALLEIPDLVRAGSVCQSWRSAYTSLRDMGQYKQQ-T 103
Query: 75 PCLVFSSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHGAV 122
PCL++++ ++ L+SL + +T+P P R +GSSHG V
Sbjct: 104 PCLLYTTESSGEKVSCLYSLVEKRAFRLTLPGTPLHKRLPIGSSHGWV 151
>Os08g0426100
Length = 324
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 11 ELLEHEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICS 70
EL PP G DWS L AD++ +L LE+PD + VC W A L+ R G+ S
Sbjct: 2 ELPPPPPPPPAAGRDWSDLLADMVDTVLCKLELPDFIRTAAVCTCWRAPALDLRRRGVYS 61
Query: 71 NNPGPCLVF---------SSSDRDPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
PCL++ SS R L+ L + + VT+PDPP R IVGSSHG
Sbjct: 62 FPRTPCLLYIPAAAAANGGSSTRS---AELYCLADERPYTVTLPDPPIAERSIVGSSHG 117
>Os11g0593400
Length = 482
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 26 WSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDRD 85
W LP DLL+ + LEIPD+ SG VC SWHA+Y RL + S PCL++S
Sbjct: 14 WETLPEDLLVTVFCQLEIPDLLRSGAVCASWHAAYRTFRRLRLPSPKQPPCLLYSCDAYG 73
Query: 86 PSITTLHSLTTGKDHYVTM----PDPPFRTRYIVGSSHGAV 122
P L+ +TG + + + FR ++GS+ G V
Sbjct: 74 PDAAGLYCPSTGATYRIPVSCGGGGGGFRNLTLIGSADGWV 114
>Os11g0593500 Protein of unknown function DUF295 family protein
Length = 487
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDR 84
DW++LP D+L+ + LEIP + SG VC SWHA+Y RL + S PCL++S
Sbjct: 13 DWTRLPEDILVTVFCQLEIPSLLLSGAVCASWHAAYRTFRRLRLPSPKQPPCLLYSCDAY 72
Query: 85 DPSITTLHSLTTGKDHYVTMP---DPPFRTRYIVGSSHGAV 122
P L+ +TG + + + FR ++GS+ G V
Sbjct: 73 GPDAAGLYCPSTGAKYRIPVSCGGGGGFRNLTLIGSADGWV 113
>Os11g0572000
Length = 459
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%)
Query: 25 DWSQLPADLLICILGTLEIPDIFSSGVVCRSWHASYLEACRLGICSNNPGPCLVFSSSDR 84
DWS LP DLL+ + +++PD+ SG VCRSWH+++ RLG+ S PCL+++++
Sbjct: 12 DWSGLPEDLLLTAMEAMQLPDLVHSGAVCRSWHSAFATFRRLGLRSPPHPPCLLYAAAAA 71
Query: 85 DPSITTLHSLTTGKDHYVTMPDPPFRTRYIVGSSHG 120
+ L+S ++ H+ +VGS+HG
Sbjct: 72 ADNAVRLYSPSSTGAHFRVPLLDEEAASGVVGSAHG 107
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,320,251
Number of extensions: 226956
Number of successful extensions: 746
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 743
Number of HSP's successfully gapped: 21
Length of query: 122
Length of database: 17,035,801
Length adjustment: 88
Effective length of query: 34
Effective length of database: 12,440,969
Effective search space: 422992946
Effective search space used: 422992946
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 149 (62.0 bits)